Os03g0352800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acyl carrier protein 1 (EC 1.6.5.3) (EC 1.6.99.3).
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Os03g0352800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acyl carrier protein 1 (EC 1.6.5.3) (EC 1.6.99.3).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.05 | 0.262 | 12.8 | 0.362 | 0.928 | 0.64 | 0.138 | 0.631 | 0.000746 | 19.3 | 12.2 | 90 | -- | -- |
| 31.6 | 0.262 | 12.8 | 0.381 | 0.935 | 0.61 | 0.00458 | -- | 0.00402 | 19.4 | 7.088 | 91 | -- | -- |
| 31.1 | 0.26 | 12.8 | 0.36 | 0.928 | 0.633 | -- | 0.594 | 0.00198 | 19.2 | 12.37 | 90 | -- | -- |
| 31.59 | 0.262 | 12.8 | 0.372 | 0.934 | 0.602 | -- | -- | 0.00247 | 19.3 | 6.817 | 90 | -- | -- |
| 40.76 | 0.297 | 12.8 | 0.281 | -- | 1.08 | -- | -0.246 | -0.0999 | -- | -64.24 | 754 | -- | -- |
| 36.76 | 0.284 | 12.8 | 0.374 | 0.938 | -- | -0.0107 | -- | 0.0301 | 18.1 | -- | -- | -- | -- |
| 36.76 | 0.284 | 12.8 | 0.374 | 0.938 | -- | -- | -- | 0.03 | 18.1 | -- | -- | -- | -- |
| 40.85 | 0.298 | 12.8 | 0.291 | -- | 1.07 | -- | -- | -0.0957 | -- | -23.47 | 754 | -- | -- |
| 35.23 | 0.276 | 12.8 | -- | 0.928 | 0.61 | -- | -- | -0.037 | 19.4 | 7.739 | 91 | -- | -- |
| 82.36 | 0.424 | 12.8 | 0.348 | -- | -- | -- | -- | 0.00914 | -- | -- | -- | -- | -- |
| 40.45 | 0.298 | 12.8 | -- | 0.933 | -- | -- | -- | -0.0117 | 18.1 | -- | -- | -- | -- |
| 43.07 | 0.306 | 12.8 | -- | -- | 1.08 | -- | -- | -0.126 | -- | -7.446 | 765 | -- | -- |
| 85.56 | 0.432 | 12.8 | -- | -- | -- | -- | -- | -0.0295 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.97 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 2 | 28.01 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 4 | 28.13 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 22 | 28.72 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 25 | 28.78 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 28 | 28.81 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 5 |
| 29 | 28.86 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 32 | 28.89 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 35 | 28.93 | temperature | 25.0 | 10 | > th | dose independent | rect. | 2 | 7 |
| 41 | 28.97 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 5 |
| 50 | 29.03 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 53 | 29.04 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 54 | 29.06 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 57 | 29.07 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 59 | 29.07 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 60 | 29.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 63 | 29.08 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 64 | 29.08 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 66 | 29.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 71 | 29.10 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 76 | 29.12 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 79 | 29.13 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 82 | 29.18 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 88 | 29.23 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 104 | 29.29 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 115 | 29.39 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 120 | 29.40 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 19 |
| 121 | 29.40 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 122 | 29.40 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 127 | 29.42 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 131 | 29.43 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 16 |
| 143 | 29.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 23 |
| 144 | 29.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 152 | 29.49 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 154 | 29.50 | wind | 5.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 156 | 29.50 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 188 | 29.61 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 194 | 29.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 196 | 29.62 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 197 | 29.62 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 199 | 29.62 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 200 | 29.62 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 203 | 29.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 206 | 29.63 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 255 | 29.77 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 260 | 29.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 261 | 29.78 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 262 | 29.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 264 | 29.78 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 15 |
| 271 | 29.79 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 9 | 19 |
| 272 | 29.80 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 290 | 29.84 | radiation | 20.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 299 | 29.85 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 16 |
| 311 | 29.88 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 9 |
| 321 | 29.91 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 330 | 29.92 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 333 | 29.92 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 335 | 29.92 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 336 | 29.92 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 339 | 29.92 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 355 | 29.93 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 362 | 29.94 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 364 | 29.95 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 5 |
| 367 | 29.95 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 369 | 29.95 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 5 |
| 386 | 29.98 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 9 | 6 |
| 391 | 29.99 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 7 | 5 |
| 397 | 30.00 | radiation | 1.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 400 | 30.01 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 6 |
| 417 | 30.03 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 2 | 16 |
| 432 | 30.04 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 444 | 30.05 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 8 |
| 447 | 30.05 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 456 | 30.06 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 468 | 30.08 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 469 | 30.09 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 484 | 30.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 9 |
| 488 | 30.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 503 | 30.13 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 506 | 30.13 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 555 | 30.18 | humidity | 80.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 602 | 30.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 620 | 30.24 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 6 |
| 628 | 30.24 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 6 |
| 644 | 30.25 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 6 |
| 646 | 30.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 649 | 30.25 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 6 |
| 650 | 30.25 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 6 |
| 652 | 30.25 | temperature | 10.0 | 30 | > th | dose independent | rect. | 15 | 18 |
| 653 | 30.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 662 | 30.25 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 16 | 20 |
| 695 | 30.28 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 698 | 30.28 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 6 | 3 |
| 710 | 30.30 | radiation | 40.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 728 | 30.32 | humidity | 60.0 | 90 | > th | dose dependent | sin | 3 | NA |
| 730 | 30.32 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 737 | 30.33 | radiation | 40.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 761 | 30.36 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 763 | 30.36 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 764 | 30.36 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 767 | 30.36 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 779 | 30.36 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 782 | 30.37 | humidity | 70.0 | 90 | > th | dose independent | sin | 5 | NA |
| 784 | 30.37 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 8 |
| 785 | 30.37 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 8 |
| 800 | 30.39 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 805 | 30.39 | humidity | 70.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 806 | 30.39 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 819 | 30.40 | wind | 9.0 | 30 | < th | dose independent | rect. | 15 | 18 |
| 837 | 30.41 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 839 | 30.41 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 6 |
| 894 | 30.45 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 897 | 30.45 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 914 | 30.47 | radiation | 20.0 | 270 | < th | dose independent | sin | 7 | NA |
| 919 | 30.47 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 21 |
| 989 | 30.53 | wind | 5.0 | 10 | < th | dose independent | rect. | 6 | 3 |