BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0597900 Os06g0597900|AK065544
(381 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0597900 SOUL heme-binding protein family protein 636 0.0
Os02g0533200 SOUL heme-binding protein family protein 91 2e-18
Os01g0850900 SOUL heme-binding protein family protein 73 4e-13
>Os06g0597900 SOUL heme-binding protein family protein
Length = 381
Score = 636 bits (1641), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/357 (87%), Positives = 313/357 (87%)
Query: 25 RQRKPAAAHSLSSRGRRPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHLFDDV 84
RQRKPAAAHSLSSRGRRPR PHLFDDV
Sbjct: 25 RQRKPAAAHSLSSRGRRPRLAVQAVAPAAAEEEKGGLPAAEAERLAEFLREDLPHLFDDV 84
Query: 85 GVDRSAYDDRVRFRDPITRHDTIDGYXXXXXXXXXXFRPDFYLHHVEQTGPYEITTRWTM 144
GVDRSAYDDRVRFRDPITRHDTIDGY FRPDFYLHHVEQTGPYEITTRWTM
Sbjct: 85 GVDRSAYDDRVRFRDPITRHDTIDGYLLNIRLLKLLFRPDFYLHHVEQTGPYEITTRWTM 144
Query: 145 VMKFVLLPWKPELVFTGLSIMGVNPQNLKFCSHVDIWDSIQNNEYFSFEGLGDVFKQLRI 204
VMKFVLLPWKPELVFTGLSIMGVNPQNLKFCSHVDIWDSIQNNEYFSFEGLGDVFKQLRI
Sbjct: 145 VMKFVLLPWKPELVFTGLSIMGVNPQNLKFCSHVDIWDSIQNNEYFSFEGLGDVFKQLRI 204
Query: 205 YKTPDIETPKYLILKRTANYEIRSYPPFLIVEAKGDKLTGSSGFNNVTGYIFGKNASSET 264
YKTPDIETPKYLILKRTANYEIRSYPPFLIVEAKGDKLTGSSGFNNVTGYIFGKNASSET
Sbjct: 205 YKTPDIETPKYLILKRTANYEIRSYPPFLIVEAKGDKLTGSSGFNNVTGYIFGKNASSET 264
Query: 265 IAMTTPVFTQASDDKLSDVSIQIVLPMNKDLDSLPAPNTEAVNLRKVEGGIAAVKKFSGR 324
IAMTTPVFTQASDDKLSDVSIQIVLPMNKDLDSLPAPNTEAVNLRKVEGGIAAVKKFSGR
Sbjct: 265 IAMTTPVFTQASDDKLSDVSIQIVLPMNKDLDSLPAPNTEAVNLRKVEGGIAAVKKFSGR 324
Query: 325 PKEEIVIQKEKELRSQLLKDVLKPQHGCLLARYNDPRTQSFIMRNEVLIWLNDFTLE 381
PKEEIVIQKEKELRSQLLKDVLKPQHGCLLARYNDPRTQSFIMRNEVLIWLNDFTLE
Sbjct: 325 PKEEIVIQKEKELRSQLLKDVLKPQHGCLLARYNDPRTQSFIMRNEVLIWLNDFTLE 381
>Os02g0533200 SOUL heme-binding protein family protein
Length = 287
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 95/196 (48%), Gaps = 27/196 (13%)
Query: 204 IYKTPDIETPKYLILKRTANYEIRSYPPFLIVEA-----KGDKLTGSS-GFNNVTGYIFG 257
+ PD+ET + +LKR A YEIR + + E G GSS FN + Y+FG
Sbjct: 84 LMSVPDLETVPFRVLKREAEYEIREVESYYVAETTMPGRSGFDFNGSSQSFNVLASYLFG 143
Query: 258 KNASSETIAMTTPVFTQAS--DDKLSDVS---------------IQIVLPMNKDLDSLPA 300
KN +SE + MTTPVFT+ D + D++ + V+P D LP
Sbjct: 144 KNTTSEQMEMTTPVFTRKGEPDGEKMDMTTPVITKKSANENKWKMSFVMPSKYGPD-LPL 202
Query: 301 PNTEAVNLRKVEGGIAAVKKFSGRPKEEIVIQKEKELRSQLLKDV---LKPQHGCLLARY 357
P +V +++V I AV FSG ++ + Q+E LR L KD +K +A+Y
Sbjct: 203 PKDPSVTIKEVPAKIVAVAAFSGLVTDDDISQRESRLRETLQKDSQFRVKDDSVVEIAQY 262
Query: 358 NDPRTQSFIMRNEVLI 373
N P T F RNE+ +
Sbjct: 263 NPPFTLPFTRRNEIAL 278
>Os01g0850900 SOUL heme-binding protein family protein
Length = 216
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 40/204 (19%)
Query: 210 IETPKYLILKRTANYEIRSYPPFLIVEA-------KGDKLTGSSGFNNVTGYIFG----- 257
+ETPK+ +L A YE+R YPP ++ E KGD+ G + N G +
Sbjct: 10 VETPKHEVLHTGAGYEVRKYPPCVVAEVTYDPAEMKGDRDGGFTVLGNYIGALGNPQNTK 69
Query: 258 -----------KNASSETIAMTTPVFTQASDDKLS----------------DVSIQIVLP 290
+ E+IAMT PV T + ++ +++Q +LP
Sbjct: 70 PEKIDMTAPVITSGEPESIAMTAPVITSGEPEPVAMTAPVITAEERSQGKGQMTMQFLLP 129
Query: 291 MN-KDLDSLPAPNTEAVNLRKVEGGIAAVKKFSGRPKEEIVIQKEKELRSQLLKDVLKPQ 349
++ P P E V LR+V V +FSG +++V +K + L++ L KD +
Sbjct: 130 SKYSKVEEAPRPTDERVVLRQVGERKYGVVRFSGLTGDKVVKEKAEWLKAALEKDGFTVK 189
Query: 350 HGCLLARYNDPRTQSFIMRNEVLI 373
+LARYN P T + NEV++
Sbjct: 190 GPFVLARYNPPFTLPPLRTNEVMV 213
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.138 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,839,517
Number of extensions: 409440
Number of successful extensions: 842
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 837
Number of HSP's successfully gapped: 3
Length of query: 381
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 278
Effective length of database: 11,657,759
Effective search space: 3240857002
Effective search space used: 3240857002
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)