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Os01g0850900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : SOUL heme-binding protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.1 (0.0367) R2 : 0.725
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.12 (0.0956) R2dC : 0.648 R2C : 0.658
β3 : -1.65 (0.175) R2dE : 0.0568 R2E : 0.0667
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.433 (0.0784) R2dN8 : 0.024 R2N8 : -0.00333
σ : 0.685
deviance : 216.04
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C
peak time of C : 6.44
E
wheather : humidity
threshold : 70.9
memory length : 1281
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 11.8
open length of G : 1.85

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
192.64 0.652 13 -0.416 3.12 -2.68 1.76 -3.69 -0.472 6.53 74.28 1296 11.6 1.78
202.83 0.663 13.1 -0.476 3.11 -1.92 1.84 -- -0.451 6.54 73.53 1292 11.7 1.88
198.59 0.656 13 -0.467 3.2 -2.99 -- -3.97 -0.465 6.48 77.01 1246 11.6 1.9
210.64 0.676 13.1 -0.498 3.13 -1.76 -- -- -0.493 6.46 70.88 1292 11.6 1.92
310.18 0.82 13.4 -0.447 -- -4.24 -- -4.22 -0.651 -- 0.09224 2040 10.8 6.22
246.79 0.736 13 -0.301 3.16 -- 1.89 -- -0.301 6.65 -- -- -- --
255.6 0.749 13 -0.274 3.17 -- -- -- -0.307 6.58 -- -- -- --
256.97 0.747 13.1 -0.0432 -- -3.93 -- -- -0.126 -- 13.12 583 10.8 6.32
216.04 0.685 13.1 -- 3.12 -1.65 -- -- -0.433 6.44 70.9 1281 11.8 1.85
780.17 1.31 13.1 -0.197 -- -- -- -- -0.242 -- -- -- -- --
257.58 0.751 13 -- 3.17 -- -- -- -0.277 6.59 -- -- -- --
237.05 0.717 13.1 -- -- -3.92 -- -- -0.282 -- -29.1 629 8.77 9.53
781.19 1.3 13.1 -- -- -- -- -- -0.221 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 210.21 humidity 80 1440 > th dose independent rect. 11 3
2 210.68 humidity 80 1440 < th dose independent rect. 11 3
3 211.94 humidity 80 720 > th dose independent rect. 11 8
4 212.90 humidity 80 720 > th dose independent rect. 12 1
5 212.96 humidity 80 1440 < th dose independent rect. 8 7
7 213.39 humidity 80 1440 > th dose dependent rect. 11 3
13 213.96 humidity 90 720 < th dose dependent rect. 11 5
15 214.18 radiation 10 1440 > th dose independent rect. 11 1
16 214.18 humidity 90 720 < th dose dependent rect. 11 11
18 214.29 humidity 80 1440 > th dose independent rect. 8 7
19 214.31 humidity 60 720 > th dose dependent rect. 12 7
20 214.37 humidity 90 720 < th dose dependent rect. 11 13
67 215.29 humidity 80 720 < th dose independent rect. 10 8
95 215.83 humidity 50 720 > th dose dependent rect. 11 15
110 216.01 humidity 80 720 < th dose independent rect. 10 10
112 216.03 humidity 80 1440 < th dose independent rect. 13 1
113 216.04 humidity 90 720 < th dose independent rect. 19 3
118 216.10 humidity 90 720 < th dose dependent sin 20 NA
139 216.30 humidity 60 720 > th dose dependent rect. 15 2
163 216.57 humidity 80 720 > th dose independent rect. 7 12
165 216.59 humidity 50 720 > th dose dependent sin 19 NA
197 216.92 humidity 80 720 < th dose dependent rect. 12 1
203 217.02 humidity 80 720 > th dose independent rect. 5 14
213 217.07 humidity 50 14400 > th dose dependent rect. 3 4
218 217.10 humidity 90 720 > th dose dependent rect. 20 1
243 217.30 humidity 50 720 > th dose dependent rect. 7 10
281 217.56 humidity 50 720 > th dose dependent rect. 22 21
303 217.72 radiation 1 1440 < th dose independent rect. 11 1
304 217.72 radiation 1 1440 < th dose dependent rect. 11 1
312 217.78 humidity 50 720 > th dose dependent rect. 5 14
322 217.86 radiation 1 1440 < th dose independent rect. 9 4
324 217.86 radiation 1 1440 < th dose dependent rect. 9 4
345 218.01 radiation 10 1440 < th dose dependent rect. 13 1
361 218.09 temperature 20 90 < th dose independent rect. 17 8
390 218.24 temperature 20 90 < th dose independent rect. 17 10
445 218.54 humidity 80 720 > th dose independent rect. 3 16
465 218.64 humidity 80 720 < th dose independent sin 22 NA
473 218.68 radiation 1 720 < th dose dependent rect. 9 8
485 218.76 humidity 80 720 > th dose independent sin 21 NA
512 218.89 wind 3 14400 < th dose dependent rect. 18 12
519 218.92 wind 3 14400 < th dose dependent rect. 22 6
527 218.94 wind 3 14400 < th dose dependent rect. 23 4
545 219.02 wind 3 14400 < th dose dependent rect. 1 2
559 219.05 humidity 50 720 > th dose dependent rect. 3 16
603 219.24 humidity 50 720 > th dose dependent sin 0 NA
613 219.28 wind 3 14400 < th dose dependent rect. 20 8
653 219.40 humidity 80 720 > th dose independent rect. 24 19
671 219.46 atmosphere 995 43200 < th dose dependent rect. 13 13
684 219.50 humidity 90 720 > th dose independent rect. 20 1
685 219.50 wind 3 14400 < th dose dependent rect. 22 8
687 219.50 humidity 80 720 < th dose dependent rect. 19 21
688 219.51 humidity 80 1440 < th dose independent sin 2 NA
695 219.54 humidity 80 1440 > th dose independent sin 2 NA
765 219.78 wind 3 14400 < th dose independent rect. 18 11
766 219.78 wind 1 43200 < th dose dependent rect. 12 1
770 219.78 humidity 90 720 < th dose dependent rect. 17 23
807 219.91 atmosphere 995 43200 < th dose dependent sin 16 NA
825 219.94 humidity 90 720 < th dose dependent rect. 23 23
846 220.00 temperature 20 90 < th dose independent sin 15 NA
891 220.15 atmosphere 995 43200 > th dose independent rect. 16 22
894 220.16 wind 3 14400 > th dose independent rect. 18 11
900 220.18 wind 1 43200 > th dose independent rect. 6 3
922 220.23 humidity 90 720 < th dose dependent no NA NA
959 220.34 temperature 25 90 < th dose dependent rect. 17 8
975 220.37 atmosphere 995 43200 < th dose independent rect. 16 21