Os02g0533200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : SOUL heme-binding protein family protein.
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Os02g0533200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : SOUL heme-binding protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 197.9 | 0.661 | 9.71 | 0.175 | 6.54 | 6.29 | 0.356 | 3.36 | -0.229 | 14.9 | 23.93 | 234 | 7.11 | -- |
| 206.63 | 0.67 | 9.66 | 0.441 | 6.61 | 6.17 | -0.188 | -- | -0.118 | 14.9 | 24.25 | 244 | 7.22 | -- |
| 198.21 | 0.656 | 9.7 | 0.213 | 6.56 | 6.3 | -- | 3.12 | -0.213 | 14.9 | 23.98 | 236 | 7.12 | -- |
| 204.88 | 0.667 | 9.68 | 0.452 | 6.59 | 5.68 | -- | -- | -0.155 | 14.9 | 24.2 | 225 | 6.46 | -- |
| 1161.85 | 1.6 | 9.89 | -0.696 | -- | -5.72 | -- | -1.49 | -1.17 | -- | 43.2 | 1094 | 0.387 | -- |
| 475.64 | 1.02 | 9.83 | -0.316 | 5.63 | -- | 0.644 | -- | -0.789 | 15.2 | -- | -- | -- | -- |
| 476.98 | 1.02 | 9.83 | -0.303 | 5.63 | -- | -- | -- | -0.785 | 15.2 | -- | -- | -- | -- |
| 460.47 | 0.999 | 9.53 | 2.01 | -- | 9.75 | -- | -- | 0.551 | -- | 161.7 | 1372 | 2.17 | -- |
| 210.14 | 0.675 | 9.7 | -- | 6.56 | 5.58 | -- | -- | -0.211 | 14.9 | 24.2 | 230 | 6.58 | -- |
| 2275.72 | 2.23 | 9.84 | -0.542 | -- | -- | -- | -- | -0.933 | -- | -- | -- | -- | -- |
| 479.4 | 1.02 | 9.82 | -- | 5.64 | -- | -- | -- | -0.752 | 15.2 | -- | -- | -- | -- |
| 354.63 | 0.877 | 9.68 | -- | -- | 7.62 | -- | -- | -0.234 | -- | 218.2 | 1342 | 1.95 | -- |
| 2283.48 | 2.23 | 9.82 | -- | -- | -- | -- | -- | -0.873 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 198.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 5 |
| 5 | 204.61 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 7 | 206.28 | temperature | 25 | 270 | < th | dose dependent | sin | 13 | NA |
| 15 | 212.33 | temperature | 25 | 270 | < th | dose dependent | rect. | 18 | 14 |
| 32 | 220.56 | temperature | 25 | 10 | < th | dose dependent | sin | 11 | NA |
| 34 | 220.82 | temperature | 20 | 30 | > th | dose independent | sin | 11 | NA |
| 51 | 224.43 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 9 |
| 78 | 226.97 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 16 |
| 96 | 228.91 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 102 | 229.53 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 113 | 230.60 | temperature | 20 | 90 | > th | dose independent | rect. | 11 | 19 |
| 114 | 230.81 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 11 |
| 121 | 231.37 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 11 |
| 142 | 232.79 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 11 |
| 151 | 233.38 | temperature | 20 | 30 | < th | dose independent | sin | 11 | NA |
| 176 | 234.90 | temperature | 20 | 90 | > th | dose independent | rect. | 15 | 15 |
| 212 | 237.25 | temperature | 20 | 90 | > th | dose independent | rect. | 13 | 17 |
| 235 | 239.48 | temperature | 20 | 270 | > th | dose independent | rect. | 9 | 21 |
| 274 | 241.72 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 12 |
| 287 | 242.45 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 14 |
| 295 | 242.69 | temperature | 20 | 10 | < th | dose independent | rect. | 20 | 10 |
| 301 | 242.89 | temperature | 20 | 10 | > th | dose independent | rect. | 15 | 15 |
| 344 | 244.63 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 10 |
| 362 | 245.45 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 8 |
| 408 | 247.38 | temperature | 15 | 270 | > th | dose dependent | sin | 12 | NA |
| 424 | 248.35 | temperature | 20 | 10 | > th | dose independent | rect. | 13 | 17 |
| 613 | 255.71 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 3 |
| 659 | 256.70 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 1 |