BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0571800 Os06g0571800|AK069851
         (347 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0571800  Similar to GATA transcription factor 3 (AtGATA-3)   494   e-140
Os02g0220400  Similar to GATA transcription factor 16             153   2e-37
Os03g0831200  Similar to GATA transcription factor 19              74   2e-13
Os01g0976800  Zinc finger, GATA-type domain containing protein     72   7e-13

>Os06g0571800 Similar to GATA transcription factor 3 (AtGATA-3)
          Length = 347

 Score =  494 bits (1272), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 258/347 (74%), Positives = 258/347 (74%)

Query: 1   MSTIYMSQLSAALPLMXXXXXXXXXXXXXXXFQAFSLQPKDPPVLFPFVIXXXXXXXXXX 60
           MSTIYMSQLSAALPLM               FQAFSLQPKDPPVLFPFVI          
Sbjct: 1   MSTIYMSQLSAALPLMEGEHHHHHQDHHQGHFQAFSLQPKDPPVLFPFVISRRSSSSSPS 60

Query: 61  XXXXXXXXXDXXXXXXXXXXXXAMLEPQNMIGGSSAGIFATPFPTVKSIRDDMIERSQFD 120
                    D            AMLEPQNMIGGSSAGIFATPFPTVKSIRDDMIERSQFD
Sbjct: 61  DSTTLSYGSDHHLTQQQQHQHQAMLEPQNMIGGSSAGIFATPFPTVKSIRDDMIERSQFD 120

Query: 121 PYDTEKLQASCGLAKVVAGGKWSAVPAAKMKITRKMGEPSSGVTGGAATTVAPKKPRRRP 180
           PYDTEKLQASCGLAKVVAGGKWSAVPAAKMKITRKMGEPSSGVTGGAATTVAPKKPRRRP
Sbjct: 121 PYDTEKLQASCGLAKVVAGGKWSAVPAAKMKITRKMGEPSSGVTGGAATTVAPKKPRRRP 180

Query: 181 AQAYEDHGHGGAMGQAFGVIRVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKARRAMM 240
           AQAYEDHGHGGAMGQAFGVIRVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKARRAMM
Sbjct: 181 AQAYEDHGHGGAMGQAFGVIRVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKARRAMM 240

Query: 241 ASGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGTLVDSIGLSW 300
           ASGL                                           RGGTLVDSIGLSW
Sbjct: 241 ASGLPASPNAAGPKAAAHSGATNAAAAAAMEETAESATVAPPPAPTTRGGTLVDSIGLSW 300

Query: 301 SKTHAAATASCSFRPSPVAPGFAAAVQDEITDAAMLLMTLSCGLVRS 347
           SKTHAAATASCSFRPSPVAPGFAAAVQDEITDAAMLLMTLSCGLVRS
Sbjct: 301 SKTHAAATASCSFRPSPVAPGFAAAVQDEITDAAMLLMTLSCGLVRS 347



>Os02g0220400 Similar to GATA transcription factor 16
          Length = 353

 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/233 (43%), Positives = 123/233 (52%), Gaps = 31/233 (13%)

Query: 1   MSTIYMSQLSAALPLMXXXXXXXXXXXXXXXFQAFSLQPKDPPVLFPFVIXXXXXXXXXX 60
           MSTIYMSQL A LPLM               + AF  + KDPP+LFPF+I          
Sbjct: 1   MSTIYMSQLPATLPLMEGDQDQGL-------YPAFH-RAKDPPILFPFMIDSAVEHQGQI 52

Query: 61  XXXXXXXXXDXXXXXXXXXXXXAMLEPQNMIGGSSAGIFATPF-PTVKSIRDDMIERSQF 119
                                        M+GGS   +  +PF PT++SI  DMI+RS +
Sbjct: 53  YGDQGLRRQQVLGESNQ------QFNDHMMMGGSDVFLTPSPFRPTIQSIGSDMIQRSSY 106

Query: 120 DPYDTE--KLQASCGLAKVVAGGKWSAVPAAKMKITRKMGEPSSGVTGGAATTVAPKKPR 177
           DPYD E    Q + G     +  KW + P  KM+I RK    ++   GGA      +KPR
Sbjct: 107 DPYDIESNNKQHANG-----STSKWMSTPPMKMRIIRKGA--ATDPEGGAV-----RKPR 154

Query: 178 RRPAQAYEDHGHGGAMGQAFGVIRVCSDCNTTKTPLWRSGPCGPKSLCNACGI 230
           RR AQA++D      + QA GV+RVCSDCNTTKTPLWRSGPCGPKSLCNACGI
Sbjct: 155 RR-AQAHQDES-QQQLQQALGVVRVCSDCNTTKTPLWRSGPCGPKSLCNACGI 205



>Os03g0831200 Similar to GATA transcription factor 19
          Length = 136

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/46 (67%), Positives = 35/46 (76%)

Query: 196 AFGVIRVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKARRAMMA 241
           A G  + C+DC+TTKTPLWR GP GPKSLCNACGIR RK RR  + 
Sbjct: 20  ASGEPKACTDCHTTKTPLWRGGPSGPKSLCNACGIRYRKKRREALG 65



>Os01g0976800 Zinc finger, GATA-type domain containing protein
          Length = 142

 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 30/40 (75%), Positives = 34/40 (85%)

Query: 201 RVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKARRAMM 240
           + C+DC+TTKTPLWR GP GPKSLCNACGIR RK RRA +
Sbjct: 22  KACADCHTTKTPLWRGGPGGPKSLCNACGIRYRKRRRAAL 61



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.132    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,063,398
Number of extensions: 392406
Number of successful extensions: 1531
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1529
Number of HSP's successfully gapped: 8
Length of query: 347
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 245
Effective length of database: 11,709,973
Effective search space: 2868943385
Effective search space used: 2868943385
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)