BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0256300 Os06g0256300|AK105344
(453 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0256300 Similar to Calmodulin-binding heat-shock protein 946 0.0
Os03g0712000 292 3e-79
Os09g0569300 Similar to Calmodulin-binding heat-shock protein 195 7e-50
Os07g0481200 Similar to Calmodulin-binding heat-shock protein 148 9e-36
Os09g0571500 Lipase, class 3 family protein 70 4e-12
Os12g0554500 Lipase, class 3 family protein 69 7e-12
>Os06g0256300 Similar to Calmodulin-binding heat-shock protein
Length = 453
Score = 946 bits (2446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/453 (100%), Positives = 453/453 (100%)
Query: 1 MSVSCGLEWVVCLGCTRWAWKRLTYIGAYDSEAWPAAAPGEFEPVPRICRVILAIYEDDL 60
MSVSCGLEWVVCLGCTRWAWKRLTYIGAYDSEAWPAAAPGEFEPVPRICRVILAIYEDDL
Sbjct: 1 MSVSCGLEWVVCLGCTRWAWKRLTYIGAYDSEAWPAAAPGEFEPVPRICRVILAIYEDDL 60
Query: 61 SNPTKFAPPGRGYAGVDLAGVVKRATYEHVGNTCPPYIVYVDHRHKEVVLAIRGLNLTRN 120
SNPTKFAPPGRGYAGVDLAGVVKRATYEHVGNTCPPYIVYVDHRHKEVVLAIRGLNLTRN
Sbjct: 61 SNPTKFAPPGRGYAGVDLAGVVKRATYEHVGNTCPPYIVYVDHRHKEVVLAIRGLNLTRN 120
Query: 121 ADYKVVLMDNKLGMQMFDGGYVHHGLLKAAQFILERETKTLQELLQQNGPDYKLIFAGHS 180
ADYKVVLMDNKLGMQMFDGGYVHHGLLKAAQFILERETKTLQELLQQNGPDYKLIFAGHS
Sbjct: 121 ADYKVVLMDNKLGMQMFDGGYVHHGLLKAAQFILERETKTLQELLQQNGPDYKLIFAGHS 180
Query: 181 LGSGIAALMTVLVVNNRKMFGNIPRSQIRCYALAPARCMSLNLAVKYADVINSVVLQDDF 240
LGSGIAALMTVLVVNNRKMFGNIPRSQIRCYALAPARCMSLNLAVKYADVINSVVLQDDF
Sbjct: 181 LGSGIAALMTVLVVNNRKMFGNIPRSQIRCYALAPARCMSLNLAVKYADVINSVVLQDDF 240
Query: 241 LPRTPTPLEYIFGSIFCLPCLLFIMCLRDTFKQDKRKFKDPRRLYAPGRMYHIVERKFCR 300
LPRTPTPLEYIFGSIFCLPCLLFIMCLRDTFKQDKRKFKDPRRLYAPGRMYHIVERKFCR
Sbjct: 241 LPRTPTPLEYIFGSIFCLPCLLFIMCLRDTFKQDKRKFKDPRRLYAPGRMYHIVERKFCR 300
Query: 301 CGRFPPEVRTAIPVEGRFEHIVLSCSTTSDHAIVWIERESEKALELMKGNEKPTTPPAQQ 360
CGRFPPEVRTAIPVEGRFEHIVLSCSTTSDHAIVWIERESEKALELMKGNEKPTTPPAQQ
Sbjct: 301 CGRFPPEVRTAIPVEGRFEHIVLSCSTTSDHAIVWIERESEKALELMKGNEKPTTPPAQQ 360
Query: 361 KMERLQSFEEEHKNALERAKTLDVPHAVDLSEVEIQEGSSPTPPSDTHSEATSEAKSAGR 420
KMERLQSFEEEHKNALERAKTLDVPHAVDLSEVEIQEGSSPTPPSDTHSEATSEAKSAGR
Sbjct: 361 KMERLQSFEEEHKNALERAKTLDVPHAVDLSEVEIQEGSSPTPPSDTHSEATSEAKSAGR 420
Query: 421 TSWDELMHKLFTRDEGGKLVVKEDIKARNIVIE 453
TSWDELMHKLFTRDEGGKLVVKEDIKARNIVIE
Sbjct: 421 TSWDELMHKLFTRDEGGKLVVKEDIKARNIVIE 453
>Os03g0712000
Length = 382
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 160/370 (43%), Positives = 216/370 (58%), Gaps = 68/370 (18%)
Query: 1 MSVSCGLEWVVCLGCTRWAWKRLTYIGAYDSEAWPAAAPGEFEPVPRICRVILAIYEDDL 60
M++SC E + L C RWA +RL+ GA DS +WPAA+P F PVPR CR LA ++
Sbjct: 1 MALSCAAECALSLACARWALRRLSLSGADDSASWPAASPSSFAPVPRACRSALAAWQQ-- 58
Query: 61 SNPTKFAPPGRGYAGVDLAGVVKRATYEHVGNTCPPYIVYVDHRHKEVVLAIRGLNLTRN 120
G D A ++A CPPY + D EVVLA+RGL L R
Sbjct: 59 --------------GHDEA---EQAPTPAPSRLCPPYRLSHDRARGEVVLAVRGLGLARL 101
Query: 121 ADYKVVLMDNKLGMQMFDGGYVHHGLLKAAQFILERETKTLQELLQQNGP-DYKLIFAGH 179
DY+V+L + G + F GG+ H GLL+AA ++L+RE ++ ++ + GP +L+F GH
Sbjct: 102 EDYRVLL--DAGGPEPFAGGHAHRGLLRAAVWLLDREGPAIRRMVAEAGPAGCRLVFVGH 159
Query: 180 SLGSGIAALMTVLVVNNRKMFGNIPRSQIRCYALAPARCMSLNLAVKYADVINSVVLQDD 239
S + + V+ DD
Sbjct: 160 S--------------------------------------------LGAGVAALAAVVADD 175
Query: 240 FLPRTPTPLEYIFGSIFCLPCLLFIMCLRDTFKQDKRKFKDPRRLYAPGRMYHIVERKFC 299
FLPRTP PL++IFGSIFCLPCLL +C+RDTF ++ K KD +LYAPGR++HIVER+ C
Sbjct: 176 FLPRTPAPLQHIFGSIFCLPCLLCFICMRDTFVSEE-KLKDASKLYAPGRVFHIVERENC 234
Query: 300 RCGRFPPEVRTAIPVEGRFEHIVLSCSTTSDHAIVWIERESEKALELMKGNEKPTTPPAQ 359
RCGR PP+VRTA+P EGRFEH+VLSC+ TSDH I+WIE+E++KAL+LM+ E+ T PP+Q
Sbjct: 235 RCGRLPPQVRTAVPAEGRFEHVVLSCNATSDHGIIWIEKEAQKALDLME-QEELTLPPSQ 293
Query: 360 QKMERLQSFE 369
QKM R++ E
Sbjct: 294 QKMLRVKETE 303
>Os09g0569300 Similar to Calmodulin-binding heat-shock protein
Length = 222
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 128/189 (67%), Gaps = 8/189 (4%)
Query: 258 LPCLLFIMCLRDTFKQDKRKFKDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVEGR 317
LPCLL I CLRDT + KDPRRLYAPGR+YHIVERK RCGR+PP V+TA+PV+GR
Sbjct: 33 LPCLLCIRCLRDTCIPEDAMLKDPRRLYAPGRIYHIVERKMFRCGRYPPVVKTAVPVDGR 92
Query: 318 FEHIVLSCSTTSDHAIVWIERESEKALELMKGNEKPTTPPAQQKMERLQSFE----EEHK 373
FEHIVLSC+ T DHAI+WIERE++KAL+LM EK P++Q+MER +S + EEHK
Sbjct: 93 FEHIVLSCNATMDHAIIWIEREAQKALDLMLEKEKTMEVPSEQRMERNESLQREHVEEHK 152
Query: 374 NALERAKTLDVPHAVDLSEVEIQEGSSPTPPSDTHSEATSEAKSAGRTSWDELMHKLFTR 433
AL RA TL VP A S G+ P + S A + R SW++L+ ++F R
Sbjct: 153 AALRRAVTLSVPDARSPSAY----GTFGEQPERSESFPPVSAMARQRMSWNDLIERVFDR 208
Query: 434 DEGGKLVVK 442
DE G +V++
Sbjct: 209 DESGHIVLR 217
>Os07g0481200 Similar to Calmodulin-binding heat-shock protein
Length = 138
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 93/116 (80%), Gaps = 1/116 (0%)
Query: 144 HGLLKAAQFILERETKTLQELLQQNGPDYKLIFAGHSLGSGIAALMTVLVVNNRKMFGNI 203
+GLLKAA+++ + E L++LL++N P Y L FAGHSLGSG+ A++ ++ V+NR G +
Sbjct: 1 NGLLKAAEWLFDAECDVLRDLLERN-PGYTLTFAGHSLGSGVVAMLALVAVHNRDRLGGV 59
Query: 204 PRSQIRCYALAPARCMSLNLAVKYADVINSVVLQDDFLPRTPTPLEYIFGSIFCLP 259
R ++RC+A+APARCMSLNLAV+YADVINSV+LQDDFLPRT TPLE +F S+ +P
Sbjct: 60 ERKRVRCFAMAPARCMSLNLAVRYADVINSVILQDDFLPRTDTPLEDVFKSLVWVP 115
>Os09g0571500 Lipase, class 3 family protein
Length = 328
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 95 PPYIVYVDHRHKEVVLAIRGLNLTRNADYKVV-LMDNKLGMQMFDGGYVHHGLLKAAQFI 153
P Y + +D R K V+L IRG + + ++ L D K+ + F H G +AA++
Sbjct: 19 PGYYIAIDPRTKLVILGIRGTHTVYDLVTDLIALSDKKVSPKGFS---THFGTYEAARWY 75
Query: 154 LERETKTLQELLQQNGPDYKLIFAGHSLGSGIAALMTVLVVNNRKMFGNIPRSQIRCYAL 213
L E +++ L+++ DYKL GHSLG AAL+ +++ K I
Sbjct: 76 LRHELGLIRKCLEKH-KDYKLRLVGHSLGGASAALLAIMLRKKSKEELGFSPDVISAVGY 134
Query: 214 APARCMSLNLAVKYADVINSVVLQDDFLPR 243
C+S +A A +++VVLQDD +PR
Sbjct: 135 GTPPCVSREIAQSCASYVSTVVLQDDIIPR 164
>Os12g0554500 Lipase, class 3 family protein
Length = 610
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 19/158 (12%)
Query: 95 PPYIVYVDHRHKEVVLAIRG-------LNLTRNAD---YKVVLMDNKLGMQMFDGGYVHH 144
P + V D K +L IRG L A+ + VV D + + G+ H
Sbjct: 183 PSFTVVRDRSAKCFLLFIRGAISVKDRLTAATGAEVPFHHVVTQDGHVSKLVL--GHAHC 240
Query: 145 GLLKAAQFILERETKTLQELLQQNGPDYKLIFAGHSLGSGIAALMTVLVVNNRKMFGNIP 204
G++ AA++I + L E + Q PDY + GHS+G+GIAA++ ++ N K+
Sbjct: 241 GMVVAARWIANQAIPCLNEAVAQF-PDYGVKIIGHSMGAGIAAILAYILRENEKL----- 294
Query: 205 RSQIRCYALAPARCMSLNLAVKYADVINSVVLQDDFLP 242
S C A PA CM+ +LA D I ++V ++D +P
Sbjct: 295 -SSSTCLAFGPAACMTWDLAESGKDFITTIVNRNDLVP 331
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.137 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,383,541
Number of extensions: 770056
Number of successful extensions: 2283
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 2279
Number of HSP's successfully gapped: 7
Length of query: 453
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 349
Effective length of database: 11,605,545
Effective search space: 4050335205
Effective search space used: 4050335205
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)