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Os07g0481200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Calmodulin-binding heat-shock protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.79 (0.0132) R2 : 0.614
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.847 (0.0315) R2dC : 0.615 R2C : 0.612
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.034 (0.0278) R2dN8 : 0.00163 R2N8 : -0.000941
σ : 0.249
deviance : 28.43
__
_____
C
peak time of C : 11.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.11 0.235 9.73 0.3 0.845 -0.301 -0.0724 -1.87 0.108 11.9 19.34 4226 -- --
25.49 0.235 9.77 0.26 0.845 0.621 -0.0908 -- 0.108 11.9 19.7 1866 -- --
25.12 0.233 9.73 0.282 0.845 -0.377 -- -2.03 0.103 11.9 19 4211 -- --
25.55 0.235 9.77 0.26 0.845 0.644 -- -- 0.104 11.9 19.6 1884 -- --
69.72 0.389 9.76 0.298 -- -0.0455 -- -1.41 0.0942 -- 19.03 3857 -- --
28.09 0.248 9.79 0.112 0.848 -- -0.0943 -- 0.0465 11.9 -- -- -- --
28.13 0.248 9.79 0.108 0.848 -- -- -- 0.046 11.9 -- -- -- --
61.14 0.364 9.78 0.33 -- 0.873 -- -- 0.171 -- 34.8 909 -- --
26.98 0.242 9.78 -- 0.845 0.465 -- -- 0.0619 11.9 19.46 1798 -- --
73.41 0.4 9.8 0.0821 -- -- -- -- 0.0347 -- -- -- -- --
28.43 0.249 9.79 -- 0.847 -- -- -- 0.034 11.9 -- -- -- --
63.56 0.371 9.78 -- -- 0.748 -- -- 0.122 -- 37.46 893 -- --
73.59 0.4 9.81 -- -- -- -- -- 0.0256 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 22.86 wind 1.0 720 > th dose independent rect. 8 5
3 22.97 wind 1.0 720 > th dose independent rect. 7 13
7 23.13 temperature 25.0 270 < th dose independent rect. 24 3
9 23.22 humidity 70.0 720 > th dose independent rect. 19 6
10 23.31 wind 3.0 43200 > th dose independent rect. 2 1
11 23.34 radiation 30.0 14400 < th dose independent rect. 16 10
12 23.34 radiation 10.0 14400 > th dose dependent rect. 5 1
24 23.35 wind 3.0 43200 < th dose independent rect. 2 1
30 23.38 temperature 15.0 720 > th dose independent rect. 8 20
31 23.39 radiation 30.0 14400 < th dose independent rect. 16 2
38 23.44 atmosphere 1015.0 720 < th dose independent rect. 1 18
39 23.46 wind 1.0 720 > th dose independent rect. 8 20
41 23.51 radiation 30.0 14400 < th dose independent rect. 16 14
43 23.52 wind 3.0 43200 > th dose independent rect. 1 3
44 23.52 temperature 15.0 720 > th dose independent rect. 7 6
45 23.53 humidity 70.0 14400 > th dose independent rect. 21 6
46 23.53 radiation 30.0 14400 < th dose independent rect. 16 7
48 23.54 humidity 50.0 270 > th dose independent rect. 13 11
53 23.63 radiation 10.0 14400 > th dose independent rect. 5 1
65 23.64 temperature 15.0 720 > th dose independent rect. 1 18
66 23.65 wind 3.0 43200 < th dose independent rect. 1 3
68 23.65 temperature 15.0 720 > th dose independent rect. 19 22
69 23.66 temperature 20.0 270 > th dose independent rect. 8 12
71 23.70 temperature 25.0 10 < th dose independent rect. 3 3
72 23.71 atmosphere 1015.0 720 < th dose independent rect. 16 12
73 23.71 atmosphere 1000.0 43200 < th dose dependent rect. 9 9
81 23.75 atmosphere 1015.0 720 < th dose independent rect. 23 14
87 23.76 atmosphere 995.0 43200 < th dose independent rect. 13 10
88 23.76 atmosphere 995.0 43200 > th dose independent rect. 11 13
89 23.76 temperature 15.0 720 > th dose independent rect. 23 14
93 23.77 wind 3.0 43200 > th dose independent rect. 1 6
95 23.77 atmosphere 995.0 43200 < th dose dependent rect. 14 9
97 23.78 temperature 30.0 720 < th dose independent rect. 18 7
98 23.78 atmosphere 995.0 43200 > th dose independent rect. 12 11
102 23.79 atmosphere 995.0 43200 < th dose independent rect. 11 13
103 23.79 atmosphere 1015.0 720 < th dose independent rect. 8 20
108 23.81 atmosphere 995.0 43200 > th dose independent sin 19 NA
109 23.81 atmosphere 1015.0 720 < th dose independent rect. 1 3
110 23.81 temperature 15.0 720 > th dose independent rect. 1 10
115 23.82 wind 3.0 43200 < th dose independent rect. 1 6
118 23.82 temperature 20.0 270 > th dose independent rect. 23 21
125 23.83 temperature 15.0 720 > th dose independent rect. 20 20
128 23.83 humidity 70.0 14400 < th dose dependent rect. 19 13
133 23.84 wind 3.0 43200 > th dose independent rect. 23 8
136 23.84 temperature 15.0 720 > th dose independent rect. 7 22
137 23.84 atmosphere 1000.0 43200 < th dose dependent rect. 14 1
147 23.86 humidity 80.0 14400 > th dose dependent rect. 21 2
148 23.87 atmosphere 995.0 43200 < th dose independent sin 18 NA
149 23.87 temperature 15.0 720 > th dose independent rect. 1 3
155 23.87 atmosphere 995.0 43200 < th dose independent rect. 10 15
157 23.87 humidity 50.0 720 > th dose independent rect. 13 19
159 23.88 wind 3.0 43200 > th dose independent rect. 5 2
160 23.88 atmosphere 1015.0 720 < th dose independent rect. 23 5
163 23.88 wind 9.0 43200 < th dose dependent rect. 1 1
172 23.89 atmosphere 1015.0 720 < th dose independent rect. 1 10
173 23.89 temperature 30.0 720 < th dose independent rect. 18 14
182 23.90 wind 7.0 720 < th dose independent rect. 19 6
183 23.90 wind 3.0 43200 < th dose independent rect. 23 8
186 23.90 atmosphere 1000.0 43200 < th dose dependent sin 23 NA
189 23.91 wind 3.0 43200 < th dose independent rect. 5 2
212 23.93 humidity 90.0 14400 > th dose dependent rect. 6 2
219 23.94 atmosphere 995.0 43200 > th dose independent rect. 1 18
220 23.94 atmosphere 995.0 43200 > th dose independent rect. 8 18
250 23.97 atmosphere 995.0 43200 < th dose independent rect. 8 18
255 23.97 humidity 80.0 14400 > th dose dependent rect. 8 1
261 23.98 temperature 25.0 10 < th dose independent rect. 1 5
275 23.99 atmosphere 995.0 43200 < th dose independent rect. 1 18
298 24.00 wind 9.0 270 < th dose dependent rect. 4 11
312 24.02 wind 7.0 720 < th dose independent rect. 21 10
319 24.02 wind 3.0 43200 < th dose dependent rect. 5 2
342 24.04 humidity 60.0 14400 < th dose independent rect. 16 16
344 24.04 wind 9.0 43200 > th dose independent rect. 21 17
364 24.06 humidity 90.0 10 > th dose independent rect. 3 3
365 24.06 wind 1.0 720 > th dose independent rect. 16 4
389 24.07 atmosphere 1015.0 720 < th dose independent rect. 16 21
392 24.07 atmosphere 1000.0 43200 < th dose dependent rect. 7 2
399 24.07 humidity 80.0 14400 > th dose dependent rect. 19 15
414 24.09 wind 5.0 720 < th dose independent rect. 4 4
415 24.09 humidity 60.0 14400 < th dose independent rect. 16 5
454 24.10 atmosphere 995.0 43200 < th dose dependent rect. 13 11
478 24.13 radiation 1.0 720 > th dose independent rect. 7 6
481 24.13 wind 9.0 43200 < th dose independent rect. 21 17
486 24.13 atmosphere 1015.0 720 < th dose independent rect. 23 21
487 24.13 wind 1.0 43200 > th dose dependent rect. 5 2
495 24.14 humidity 90.0 14400 < th dose independent rect. 6 2
496 24.14 humidity 60.0 14400 < th dose independent rect. 16 2
498 24.14 radiation 30.0 4320 < th dose independent rect. 5 3
501 24.14 humidity 90.0 720 < th dose independent rect. 8 5
505 24.14 atmosphere 995.0 270 > th dose independent rect. 15 13
518 24.15 radiation 30.0 4320 < th dose independent rect. 24 8
520 24.15 radiation 30.0 4320 < th dose independent rect. 22 10
523 24.15 wind 9.0 43200 > th dose independent rect. 1 13
550 24.17 temperature 15.0 720 > th dose independent rect. 16 4
558 24.17 wind 9.0 720 < th dose independent rect. 20 20
566 24.17 wind 1.0 43200 > th dose dependent rect. 22 9
568 24.18 humidity 80.0 14400 < th dose independent rect. 19 1
572 24.18 temperature 15.0 270 > th dose independent rect. 15 13
578 24.18 humidity 50.0 14400 > th dose dependent rect. 22 1
586 24.18 wind 9.0 43200 < th dose dependent rect. 22 9
588 24.19 humidity 90.0 14400 < th dose independent rect. 4 4
638 24.22 atmosphere 995.0 43200 > th dose independent sin 3 NA
640 24.22 atmosphere 1000.0 43200 < th dose independent rect. 14 1
645 24.22 wind 9.0 720 < th dose independent rect. 13 18
646 24.22 wind 1.0 43200 > th dose dependent rect. 1 2
650 24.22 atmosphere 995.0 43200 < th dose dependent rect. 12 13
661 24.23 temperature 20.0 720 > th dose independent rect. 16 20
669 24.24 precipitation 0.1 4320 < th dose independent rect. 5 2
676 24.24 wind 7.0 270 < th dose independent rect. 4 11
679 24.24 wind 9.0 43200 < th dose independent rect. 1 13
681 24.24 humidity 60.0 14400 > th dose independent rect. 17 15
686 24.24 radiation 1.0 1440 < th dose dependent rect. 14 2
687 24.24 precipitation 0.1 4320 < th dose dependent rect. 5 2
697 24.25 humidity 60.0 14400 > th dose independent rect. 17 1
698 24.25 precipitation 0.1 4320 > th dose independent rect. 5 2
701 24.25 wind 9.0 43200 > th dose independent rect. 6 8
715 24.25 wind 1.0 43200 > th dose dependent rect. 1 6
731 24.26 wind 9.0 43200 > th dose dependent rect. 10 4
743 24.27 precipitation 0.1 4320 > th dose dependent rect. 5 2
776 24.28 humidity 90.0 14400 > th dose dependent rect. 4 17
778 24.29 wind 3.0 43200 > th dose independent sin 9 NA
779 24.29 atmosphere 995.0 43200 < th dose independent sin 3 NA
780 24.29 atmosphere 1000.0 43200 > th dose independent rect. 14 1
788 24.29 humidity 50.0 270 > th dose independent rect. 3 22
791 24.29 wind 5.0 43200 < th dose dependent rect. 1 6
799 24.29 humidity 90.0 14400 > th dose dependent rect. 5 15
830 24.31 humidity 60.0 14400 > th dose independent rect. 17 8
847 24.31 wind 9.0 43200 > th dose dependent rect. 9 9
853 24.32 wind 3.0 43200 < th dose independent sin 9 NA
854 24.32 humidity 90.0 14400 > th dose independent rect. 5 3
856 24.32 humidity 60.0 14400 > th dose independent rect. 17 5
872 24.32 humidity 80.0 14400 > th dose dependent sin 9 NA
891 24.33 radiation 30.0 270 < th dose independent rect. 15 13
894 24.33 temperature 20.0 270 < th dose independent rect. 4 20
895 24.33 humidity 50.0 270 > th dose independent rect. 4 20
897 24.33 atmosphere 995.0 43200 < th dose dependent sin 18 NA
942 24.35 wind 9.0 43200 > th dose independent sin 5 NA
945 24.35 wind 9.0 43200 < th dose independent rect. 6 8
958 24.35 wind 3.0 1440 < th dose dependent rect. 8 3
988 24.36 precipitation 0.1 270 < th dose independent rect. 15 13
995 24.36 humidity 90.0 14400 > th dose dependent sin 1 NA
996 24.36 radiation 10.0 43200 < th dose dependent rect. 9 1