BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0129600 Os06g0129600|J075115G22
(85 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0129600 Conserved hypothetical protein 153 2e-38
Os06g0156700 Lipolytic enzyme, G-D-S-L family protein 100 3e-22
AK105422 82 7e-17
Os01g0214600 Lipolytic enzyme, G-D-S-L family protein 82 9e-17
Os06g0156600 Lipolytic enzyme, G-D-S-L family protein 79 7e-16
Os05g0209600 Lipolytic enzyme, G-D-S-L family protein 74 2e-14
Os06g0531600 Lipolytic enzyme, G-D-S-L family protein 68 2e-12
Os06g0531900 Lipolytic enzyme, G-D-S-L family protein 67 3e-12
Os01g0214800 Lipolytic enzyme, G-D-S-L family protein 64 2e-11
Os06g0157000 Lipolytic enzyme, G-D-S-L family protein 64 2e-11
>Os06g0129600 Conserved hypothetical protein
Length = 85
Score = 153 bits (387), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/85 (89%), Positives = 76/85 (89%)
Query: 1 FDAAEXXXXXXXXXSKVIGGDFRRGANMAIVGGTALDFDFFESIGVGFPFWNYGSMNVQL 60
FDAAE SKVIGGDFRRGANMAIVGGTALDFDFFESIGVGFPFWNYGSMNVQL
Sbjct: 1 FDAAEGLGLPLLPPSKVIGGDFRRGANMAIVGGTALDFDFFESIGVGFPFWNYGSMNVQL 60
Query: 61 RWFRDLLPSICATAAPQSMYVVSCV 85
RWFRDLLPSICATAAPQSMYVVSCV
Sbjct: 61 RWFRDLLPSICATAAPQSMYVVSCV 85
>Os06g0156700 Lipolytic enzyme, G-D-S-L family protein
Length = 404
Score = 100 bits (248), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Query: 19 GGDFRRGANMAIVGGTALDFDFFESIGVGFPFWNYGSMNVQLRWFRDLLPSICATAAPQ 77
GGDFRRGANMAIVG TALDFDF +SIG+G+P WN G+MNVQL+WF LLPSICAT PQ
Sbjct: 126 GGDFRRGANMAIVGATALDFDFLKSIGLGYPIWNNGAMNVQLQWFHHLLPSICAT-QPQ 183
>AK105422
Length = 379
Score = 82.4 bits (202), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 15 SKVIGGDFRRGANMAIVGGTALDFDFFESIGVGFPFWNYGSMNVQLRWFRDLLPSICAT 73
SK GGDF++GANMAI+G T ++FDFF+S+G+G WN G ++ Q++WF+ LLPSIC
Sbjct: 108 SKASGGDFKKGANMAIIGATTMNFDFFQSLGLGNSIWNNGPLDTQIQWFQQLLPSICGN 166
>Os01g0214600 Lipolytic enzyme, G-D-S-L family protein
Length = 349
Score = 82.0 bits (201), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 15 SKVIGGDFRRGANMAIVGGTALDFDFFESIGVGFPFWNYGSMNVQLRWFRDLLPSICAT 73
SK GGDF++GANMAI+G T ++FDFF+S+G+G WN G ++ Q++WF+ LLPSIC
Sbjct: 95 SKASGGDFKKGANMAIIGATTMNFDFFQSLGLGNSIWNNGPLDTQIQWFQQLLPSICGN 153
>Os06g0156600 Lipolytic enzyme, G-D-S-L family protein
Length = 360
Score = 79.0 bits (193), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 45/60 (75%)
Query: 15 SKVIGGDFRRGANMAIVGGTALDFDFFESIGVGFPFWNYGSMNVQLRWFRDLLPSICATA 74
SK G DFRRGANMAI+G T +D FF+S+G+G WN G +N Q++WF+ L+PSIC ++
Sbjct: 90 SKRGGSDFRRGANMAIIGATTMDSGFFQSLGIGDKIWNNGPLNTQIQWFQQLMPSICGSS 149
>Os05g0209600 Lipolytic enzyme, G-D-S-L family protein
Length = 367
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 42/55 (76%)
Query: 19 GGDFRRGANMAIVGGTALDFDFFESIGVGFPFWNYGSMNVQLRWFRDLLPSICAT 73
GGDF++GANMAI+G T++D FF+SIG+ WN G ++ Q++WFR LLPS+C
Sbjct: 100 GGDFKKGANMAIIGATSMDAAFFKSIGLSDKIWNNGPLDTQIQWFRQLLPSVCGN 154
>Os06g0531600 Lipolytic enzyme, G-D-S-L family protein
Length = 375
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%)
Query: 15 SKVIGGDFRRGANMAIVGGTALDFDFFESIGVGFPFWNYGSMNVQLRWFRDLLPSICAT 73
SK F RGAN AI G TALD DFFE G+G WN GS+ Q++W RD+ PS C++
Sbjct: 99 SKAKNASFARGANFAITGATALDTDFFERRGLGKTVWNSGSLFTQIQWLRDIKPSFCSS 157
>Os06g0531900 Lipolytic enzyme, G-D-S-L family protein
Length = 395
Score = 67.0 bits (162), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 15 SKVIGGDFRRGANMAIVGGTALDFDFFESIGVGFPFWNYGSMNVQLRWFRDLLPSICAT 73
SK G DF +GAN AI G TAL++ FF+ G+ WN GS+N Q+ W +D+ PS+C +
Sbjct: 121 SKAHGADFSKGANFAITGATALEYSFFKQHGIDQRIWNTGSINTQIGWLQDMKPSLCKS 179
>Os01g0214800 Lipolytic enzyme, G-D-S-L family protein
Length = 372
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 15 SKVIGGDFRRGANMAIVGGTALDFDFFESIGVGFPFWNYGSMNVQLRWFRDLLPSICATA 74
SK F RGAN AI G T+LD +F+ G+G WN GS++ Q++WF+D+ SIC +
Sbjct: 94 SKAKNATFHRGANFAITGATSLDTPYFQGRGLGHTVWNSGSLHTQIKWFQDMKASICKS- 152
Query: 75 APQ 77
PQ
Sbjct: 153 -PQ 154
>Os06g0157000 Lipolytic enzyme, G-D-S-L family protein
Length = 341
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 15 SKVIGGDFRRGANMAIVGGTALDFDFFESIGVGFPFWNYGSMNVQLRWFRDLLPSIC 71
SK DF++GANMAI G TA+D +FF S+G+ WN G ++ Q++WF+ + S+C
Sbjct: 70 SKSTSADFKKGANMAITGATAMDANFFRSLGLSDKIWNNGPISFQIQWFQQISSSVC 126
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.328 0.141 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,702,363
Number of extensions: 98089
Number of successful extensions: 221
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 232
Number of HSP's successfully gapped: 11
Length of query: 85
Length of database: 17,035,801
Length adjustment: 55
Effective length of query: 30
Effective length of database: 14,164,031
Effective search space: 424920930
Effective search space used: 424920930
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 149 (62.0 bits)