FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0156600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.86 (0.158) R2 : 0.347
β1 : -9.02 (1.07) R2dD : 0.785 R2D : -0.111
β2 : -- (--) R2dC : -- R2C : --
β3 : 4.56 (0.638) R2dE : 0.295 R2E : -0.15
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -18.4 (5.16) R2dD*E : 0.167 R2D*E : -0.576
γ1 : -1.89 (0.273) R2dN8 : 0.13 R2N8 : -0.0157
σ : 2.01
deviance : 1865.1
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 26.51
memory length : 1171
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 7.17
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
1876.97 2.04 5.94 -9.69 0.687 4.05 1.24 -18 -2.24 4.79 26 1536 6.44 --
1904.95 2.03 5.43 -5.44 0.15 2.47 0.82 -- -1.27 3.64 27.1 1164 7.2 --
1880.06 2.02 5.95 -9.85 0.738 4.31 -- -19.6 -2.23 4.73 26.1 1564 6.3 --
1902.88 2.03 5.43 -5.51 0.228 2.53 -- -- -1.34 7.06 26.73 1153 7.79 --
1865.1 2.01 5.86 -9.02 -- 4.56 -- -18.4 -1.89 -- 26.51 1171 7.17 --
2135.92 2.17 5.46 -4.86 0.679 -- 1.46 -- -1.48 4.26 -- -- -- --
2141.72 2.17 5.46 -4.87 0.686 -- -- -- -1.49 4.01 -- -- -- --
1905.1 2.03 5.44 -5.52 -- 2.57 -- -- -1.36 -- 26.6 1154 7.77 --
2662.58 2.4 5.26 -- 0.378 1.63 -- -- -0.615 6.55 28.5 1164 6.77 --
2167.39 2.18 5.47 -4.85 -- -- -- -- -1.47 -- -- -- -- --
2767.71 2.46 5.34 -- 0.592 -- -- -- -0.949 4.13 -- -- -- --
2667.96 2.41 5.27 -- -- 1.66 -- -- -0.628 -- 28.49 1168 6.59 --
2786.72 2.46 5.35 -- -- -- -- -- -0.936 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 1877.14 temperature 25 1440 > th dose dependent rect. 15 9
11 1881.00 temperature 25 1440 > th dose dependent rect. 15 17
15 1881.67 temperature 25 1440 > th dose dependent rect. 16 3
16 1881.90 temperature 25 1440 > th dose dependent rect. 18 1
24 1882.61 temperature 25 1440 > th dose dependent rect. 16 1
54 1887.80 temperature 25 1440 > th dose dependent sin 13 NA
126 1904.76 temperature 25 1440 > th dose dependent rect. 21 1
162 1912.83 humidity 70 720 > th dose independent rect. 17 14
167 1914.32 temperature 30 1440 < th dose independent rect. 14 17
169 1914.38 temperature 30 1440 < th dose independent rect. 14 13
176 1914.57 temperature 30 1440 < th dose independent rect. 14 11
178 1914.65 temperature 30 1440 < th dose independent rect. 14 5
181 1914.83 temperature 30 1440 < th dose independent rect. 14 8
188 1915.58 temperature 30 1440 > th dose independent rect. 14 5
206 1915.72 temperature 30 1440 < th dose independent sin 14 NA
219 1916.15 humidity 70 720 < th dose independent rect. 17 2
235 1916.48 temperature 25 1440 > th dose dependent rect. 6 18
242 1916.64 temperature 30 1440 > th dose independent sin 13 NA
298 1918.75 temperature 25 1440 > th dose dependent no NA NA
340 1920.13 temperature 25 1440 > th dose dependent rect. 21 23
344 1920.31 humidity 70 720 < th dose independent rect. 17 14
365 1920.80 temperature 20 270 > th dose dependent rect. 14 19
384 1922.01 humidity 70 720 > th dose independent rect. 18 3
400 1922.41 temperature 25 1440 > th dose dependent rect. 18 23
426 1923.01 wind 5 43200 > th dose dependent rect. 11 5
438 1923.87 wind 7 43200 < th dose independent rect. 2 15
441 1924.04 wind 7 43200 < th dose independent rect. 4 13
446 1924.37 temperature 25 1440 > th dose independent rect. 21 2
469 1924.74 radiation 30 1440 > th dose independent rect. 16 16
471 1924.86 wind 7 43200 > th dose independent rect. 2 15
528 1926.19 wind 5 43200 > th dose dependent rect. 10 7
533 1926.36 humidity 80 1440 < th dose dependent rect. 17 2
565 1927.19 humidity 70 720 > th dose independent rect. 18 9
566 1927.21 temperature 25 1440 < th dose independent rect. 21 2
644 1928.57 radiation 30 1440 < th dose independent rect. 21 11
682 1929.43 temperature 20 90 > th dose dependent rect. 16 17
683 1929.44 wind 7 43200 < th dose independent sin 0 NA
712 1929.71 temperature 30 1440 < th dose independent rect. 17 23
716 1929.77 temperature 30 1440 < th dose independent rect. 23 20
717 1929.77 temperature 30 1440 < th dose independent rect. 21 22
726 1929.85 temperature 30 1440 < th dose independent rect. 6 21
728 1929.87 temperature 30 1440 < th dose independent rect. 15 1
730 1929.87 temperature 30 1440 < th dose independent rect. 23 23
751 1929.90 temperature 30 1440 < th dose independent rect. 2 23
757 1929.96 temperature 30 1440 < th dose independent rect. 6 19
758 1929.97 temperature 30 1440 < th dose independent no NA NA
761 1929.98 temperature 30 1440 < th dose independent rect. 2 17
762 1929.99 humidity 70 720 > th dose independent rect. 17 6
773 1930.04 temperature 30 1440 < th dose independent rect. 6 13
827 1930.26 wind 7 43200 > th dose independent sin 1 NA
854 1930.34 wind 5 43200 > th dose dependent rect. 5 12
933 1931.28 wind 5 43200 > th dose independent rect. 11 4
938 1931.41 wind 5 43200 > th dose independent rect. 10 6
939 1931.41 wind 5 43200 > th dose dependent sin 23 NA
986 1932.12 wind 5 43200 > th dose dependent rect. 11 19