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Os06g0129600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.06 (0.0395) R2 : 0.818
β1 : -3.55 (0.158) R2dD : 0.25 R2D : 0.469
β2 : 0.674 (0.101) R2dC : 0.0183 R2C : 0.0127
β3 : -2.64 (0.154) R2dE : 0.126 R2E : 0.271
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -6.47 (0.631) R2dD*E : 0.0523 R2D*E : 0.179
γ1 : 1.07 (0.0842) R2dN8 : 0.0868 R2N8 : 0.152
σ : 0.728
deviance : 244.62
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C
peak time of C : 18.9
E
wheather : radiation
threshold : 35.85
memory length : 1431
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 16.3
open length of G : 13.9

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
246.28 0.737 9.06 -3.5 0.765 -2.45 -0.638 -5.74 1.03 19.4 16.72 1433 16.3 13.8
284.35 0.785 9.06 -4.31 0.621 -3 -0.944 -- 0.823 18.5 14.2 1416 15.9 14.3
244.62 0.728 9.06 -3.55 0.674 -2.64 -- -6.47 1.07 18.9 35.85 1431 16.3 13.9
279.52 0.779 9.06 -4.26 0.565 -2.94 -- -- 0.879 18.5 7.102 1411 15.9 14.4
261.88 0.754 9.03 -3.62 -- -2.72 -- -6.3 1.04 -- 54.45 1429 16 14.1
478.96 1.03 8.94 -4.64 0.84 -- 0.992 -- 1.24 21.8 -- -- -- --
481.77 1.03 8.94 -4.67 0.857 -- -- -- 1.24 21.2 -- -- -- --
291.19 0.795 9.06 -4.27 -- -2.85 -- -- 0.941 -- 5.747 1410 15.6 14.4
498.27 1.04 8.77 -- 0.0195 -5.89 -- -- 1.36 5.59 44.27 10069 17 12.7
524.33 1.07 8.92 -4.67 -- -- -- -- 1.23 -- -- -- -- --
1056.6 1.52 8.83 -- 0.863 -- -- -- 1.76 20.8 -- -- -- --
475.71 1.02 8.9 -- -- -5.57 -- -- 1.31 -- 40.73 10070 17.1 12.7
1098.91 1.55 8.8 -- -- -- -- -- 1.75 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 248.44 radiation 10 14400 < th dose dependent rect. 17 12
2 248.53 radiation 10 14400 < th dose dependent rect. 17 7
4 248.57 radiation 10 14400 < th dose dependent rect. 17 4
7 248.58 radiation 10 14400 < th dose dependent rect. 17 10
12 248.77 radiation 40 14400 < th dose dependent rect. 17 7
15 248.80 radiation 40 14400 < th dose dependent rect. 17 11
56 249.57 radiation 1 14400 > th dose dependent rect. 17 12
57 249.61 radiation 1 14400 > th dose dependent rect. 17 2
96 252.97 radiation 20 1440 < th dose dependent rect. 16 14
154 254.61 humidity 90 43200 > th dose dependent rect. 21 1
159 254.82 radiation 40 1440 < th dose dependent rect. 16 12
171 255.45 radiation 10 14400 < th dose independent rect. 16 1
192 255.75 radiation 30 1440 < th dose dependent rect. 16 5
196 255.85 radiation 1 1440 > th dose dependent rect. 16 14
215 256.79 radiation 10 14400 < th dose independent rect. 16 11
219 256.81 radiation 10 14400 < th dose independent rect. 16 8
222 256.84 radiation 10 14400 < th dose independent rect. 16 5
236 257.39 radiation 10 14400 < th dose dependent sin 15 NA
239 257.64 radiation 1 1440 > th dose dependent rect. 16 3
249 257.72 temperature 25 1440 > th dose dependent rect. 16 1
266 258.17 temperature 25 1440 > th dose dependent rect. 16 3
269 258.49 radiation 1 14400 > th dose independent rect. 18 1
306 259.31 radiation 1 1440 < th dose dependent rect. 9 21
333 259.80 humidity 90 43200 > th dose independent rect. 21 2
387 260.96 radiation 1 1440 < th dose independent rect. 10 20
392 261.08 radiation 1 1440 < th dose independent rect. 12 18
446 261.84 humidity 90 43200 < th dose independent rect. 18 1
452 261.95 radiation 30 14400 < th dose independent rect. 15 2
453 261.95 radiation 30 14400 < th dose independent rect. 15 9
455 261.96 radiation 30 14400 < th dose independent rect. 15 16
457 261.97 radiation 30 14400 < th dose independent rect. 15 12
460 261.99 radiation 30 14400 < th dose independent rect. 15 6
482 262.24 temperature 25 1440 > th dose dependent sin 18 NA
539 262.68 radiation 1 1440 > th dose independent rect. 12 18
570 262.94 radiation 1 1440 > th dose independent rect. 8 22
574 262.95 radiation 1 14400 < th dose independent sin 14 NA
623 263.28 radiation 1 14400 < th dose independent rect. 9 21
672 263.67 humidity 90 43200 < th dose independent rect. 17 5
682 263.74 radiation 1 14400 > th dose independent sin 14 NA
689 263.77 humidity 90 43200 < th dose independent rect. 20 2
715 263.89 radiation 1 14400 > th dose independent rect. 9 21
732 264.02 temperature 25 1440 > th dose dependent rect. 13 19
737 264.07 radiation 30 14400 > th dose independent rect. 15 17
832 264.52 humidity 90 43200 > th dose independent rect. 18 5
853 264.66 temperature 10 1440 > th dose dependent rect. 16 1
907 264.95 radiation 1 14400 > th dose independent rect. 5 1
912 265.04 radiation 1 14400 < th dose independent rect. 5 1
930 265.11 radiation 30 14400 > th dose independent rect. 7 1
983 265.35 temperature 25 1440 > th dose dependent rect. 4 18