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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0531600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.07 (0.0636) R2 : 0.613
β1 : -6.16 (0.24) R2dD : 0.617 R2D : 0.368
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.09 (0.173) R2dE : 0.132 R2E : -0.0228
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.29 (0.136) R2dN8 : 0.103 R2N8 : 0.00492
σ : 1.19
deviance : 652.69
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 27.1
memory length : 1445
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
637.09 1.19 6.06 -6.1 0.387 2.2 -1.89 0.21 -1.3 6.36 27.1 1506 -- --
637.09 1.18 6.06 -6.15 0.382 2.21 -1.9 -- -1.31 6.38 27.12 1497 -- --
645.6 1.18 6.06 -6.13 0.415 2.26 -- 0.16 -1.3 5.81 27.1 1540 -- --
645.6 1.18 6.07 -6.17 0.416 2.28 -- -- -1.31 5.78 27.1 1540 -- --
652.62 1.19 6.06 -6.08 -- 2.05 -- 0.356 -1.28 -- 27.1 1445 -- --
846.27 1.36 6.07 -5.46 0.446 -- -1.56 -- -1.31 6 -- -- -- --
851.01 1.37 6.07 -5.48 0.459 -- -- -- -1.3 4.83 -- -- -- --
652.69 1.19 6.07 -6.16 -- 2.09 -- -- -1.29 -- 27.1 1445 -- --
1581.2 1.85 5.87 -- 0.364 1.38 -- -- -0.448 6.52 31.27 1961 -- --
862.14 1.37 6.07 -5.46 -- -- -- -- -1.29 -- -- -- -- --
1641.2 1.9 5.93 -- 0.363 -- -- -- -0.693 5.29 -- -- -- --
1585.08 1.85 5.87 -- -- 1.27 -- -- -0.425 -- 30.2 1551 -- --
1648.06 1.89 5.93 -- -- -- -- -- -0.686 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 615.48 atmosphere 1000.0 43200 < th dose independent rect. 4 9
3 615.73 atmosphere 1000.0 43200 > th dose independent rect. 4 8
4 615.75 atmosphere 1000.0 43200 < th dose independent rect. 4 4
10 616.09 atmosphere 1000.0 43200 > th dose independent rect. 4 4
17 616.39 atmosphere 1000.0 43200 < th dose independent rect. 6 7
18 616.44 atmosphere 1000.0 43200 < th dose independent rect. 11 1
21 616.59 atmosphere 1000.0 43200 > th dose independent rect. 11 1
22 616.63 atmosphere 1000.0 43200 > th dose independent rect. 6 7
27 616.69 atmosphere 1000.0 43200 < th dose independent rect. 9 4
35 616.81 atmosphere 1000.0 43200 < th dose dependent rect. 15 2
44 616.97 atmosphere 1000.0 43200 < th dose independent rect. 7 1
52 617.04 atmosphere 1000.0 43200 > th dose independent rect. 6 1
191 622.39 atmosphere 1000.0 43200 < th dose dependent rect. 5 14
196 622.54 atmosphere 1000.0 43200 < th dose dependent sin 22 NA
210 622.86 wind 9.0 43200 < th dose independent rect. 20 11
226 623.36 atmosphere 1000.0 43200 < th dose independent sin 2 NA
233 623.48 wind 9.0 43200 > th dose independent rect. 20 11
241 623.63 atmosphere 1000.0 43200 > th dose independent sin 2 NA
331 625.89 wind 9.0 43200 > th dose dependent rect. 20 11
481 628.73 atmosphere 1000.0 43200 < th dose independent rect. 18 1
512 629.22 atmosphere 1000.0 43200 < th dose independent rect. 18 21
539 629.72 atmosphere 1000.0 43200 < th dose dependent rect. 7 1
573 630.09 wind 9.0 43200 > th dose independent rect. 17 19
588 630.44 wind 9.0 43200 > th dose independent sin 11 NA
591 630.47 atmosphere 1000.0 43200 > th dose independent rect. 18 21
662 631.29 temperature 25.0 1440 > th dose dependent rect. 18 3
726 631.99 wind 9.0 43200 < th dose independent sin 11 NA
760 632.38 atmosphere 1000.0 43200 < th dose independent no NA NA
771 632.51 wind 9.0 43200 < th dose independent rect. 17 19
774 632.53 wind 9.0 43200 < th dose independent rect. 20 4
799 632.84 wind 9.0 43200 > th dose dependent sin 13 NA
807 632.99 atmosphere 1000.0 43200 < th dose independent rect. 14 23
816 633.10 wind 9.0 43200 > th dose dependent rect. 17 15
824 633.16 atmosphere 1000.0 43200 < th dose independent rect. 9 23
845 633.34 wind 9.0 43200 > th dose dependent rect. 14 18
860 633.52 atmosphere 1000.0 43200 > th dose independent no NA NA
877 633.86 wind 9.0 43200 > th dose independent rect. 20 4
884 633.94 precipitation 0.1 43200 > th dose dependent rect. 20 1
915 634.29 atmosphere 1000.0 43200 > th dose independent rect. 14 23
917 634.31 wind 9.0 43200 > th dose dependent rect. 20 2
922 634.34 atmosphere 1000.0 43200 > th dose independent rect. 9 23
945 634.70 temperature 30.0 1440 < th dose independent rect. 11 8
947 634.70 temperature 30.0 1440 < th dose independent rect. 11 21
948 634.71 temperature 30.0 1440 < th dose independent rect. 11 11
949 634.71 temperature 30.0 1440 < th dose independent rect. 11 16
955 634.74 temperature 30.0 1440 < th dose independent rect. 11 14
968 634.83 wind 9.0 43200 > th dose independent rect. 17 15