BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0521900 Os05g0521900|Os05g0521900
(363 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0521900 IQ calmodulin-binding region domain containing... 651 0.0
Os01g0743100 IQ calmodulin-binding region domain containing... 239 2e-63
Os01g0190500 IQ calmodulin-binding region domain containing... 82 4e-16
Os05g0187500 IQ calmodulin-binding region domain containing... 72 7e-13
>Os05g0521900 IQ calmodulin-binding region domain containing protein
Length = 363
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/363 (89%), Positives = 326/363 (89%)
Query: 1 MRWFKKVLTGKKEGGDRDRKEHSXXXXXXXXXXXXXMERRRWSFAKPRSSFADGSRRPSV 60
MRWFKKVLTGKKEGGDRDRKEHS MERRRWSFAKPRSSFADGSRRPSV
Sbjct: 1 MRWFKKVLTGKKEGGDRDRKEHSAAGGANGGVAPPPMERRRWSFAKPRSSFADGSRRPSV 60
Query: 61 TAVVAGELSQVRPCSCGQQREVEAAVMIQKAFRGYXXXXXXXXXXXXVKIQALVRGYLVR 120
TAVVAGELSQVRPCSCGQQREVEAAVMIQKAFRGY VKIQALVRGYLVR
Sbjct: 61 TAVVAGELSQVRPCSCGQQREVEAAVMIQKAFRGYLARRALRALKALVKIQALVRGYLVR 120
Query: 121 KQAATTXXXXXXXXXXXXSSRAIKMASSRKSVEQERIVVQMQGGRVKTLTLPVVHRRRVS 180
KQAATT SSRAIKMASSRKSVEQERIVVQMQGGRVKTLTLPVVHRRRVS
Sbjct: 121 KQAATTLQRLQALMRLQASSRAIKMASSRKSVEQERIVVQMQGGRVKTLTLPVVHRRRVS 180
Query: 181 DGGDINFDRSPRIVEMDTCQLRCRSSRITSRYAADPPPDGTPGSVPLSSPHLYCYKPPPS 240
DGGDINFDRSPRIVEMDTCQLRCRSSRITSRYAADPPPDGTPGSVPLSSPHLYCYKPPPS
Sbjct: 181 DGGDINFDRSPRIVEMDTCQLRCRSSRITSRYAADPPPDGTPGSVPLSSPHLYCYKPPPS 240
Query: 241 RHLQAEEHEHDARAQPKTTHNTPRLAAALPAGYHGPASPAKGRVVSPRYMADTASSVARA 300
RHLQAEEHEHDARAQPKTTHNTPRLAAALPAGYHGPASPAKGRVVSPRYMADTASSVARA
Sbjct: 241 RHLQAEEHEHDARAQPKTTHNTPRLAAALPAGYHGPASPAKGRVVSPRYMADTASSVARA 300
Query: 301 RCQSAPRQRHGAAGEPRPSLARAGSRKSRPDSAISLKSSEMSRHEDSEFSDDVTRDYYLD 360
RCQSAPRQRHGAAGEPRPSLARAGSRKSRPDSAISLKSSEMSRHEDSEFSDDVTRDYYLD
Sbjct: 301 RCQSAPRQRHGAAGEPRPSLARAGSRKSRPDSAISLKSSEMSRHEDSEFSDDVTRDYYLD 360
Query: 361 QLW 363
QLW
Sbjct: 361 QLW 363
>Os01g0743100 IQ calmodulin-binding region domain containing protein
Length = 378
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 178/391 (45%), Positives = 215/391 (54%), Gaps = 45/391 (11%)
Query: 1 MRWFKKVLTGKKEGGDRDRKEHSXXXXXXXXXXXXXMERRRWSFAKPRSSFADGSRRPS- 59
+RW KK+LTG+KE ++ H+ E+ RWSFAK R S D RRPS
Sbjct: 5 IRWLKKLLTGRKEAHKGLKENHAVSDGAEK-------EKSRWSFAKHRRSGVDSGRRPSE 57
Query: 60 ----VTAVVAGELSQVR-PCSCGQ-----QREVEAAVMIQKAFRGYXXXXXXXXXXXXVK 109
A VA E S+VR PC CG+ R +AA++IQKA+RGY VK
Sbjct: 58 AALAAVAAVAVEPSEVRRPCHCGEVENAIARREKAAMVIQKAYRGYLARKALRALRSLVK 117
Query: 110 IQALVRGYLVRKQAATTXXXXXXXXXXXXSSRAIKMASSRKSVEQERIVVQMQGGRVKTL 169
+QALVRGYLVRKQAATT SSRA AS RKS+EQERI V+ R+KT
Sbjct: 118 LQALVRGYLVRKQAATTLHRLQALMRQQASSRAATRASYRKSMEQERISVEET--RLKTT 175
Query: 170 TLPVVHRRRVSDGGDINFDRSPRIVEMDTCQLRCRSSRITSRYAADPPPDG-TPGSV--- 225
T HRRR+SD D N++RSPRIVEMDTC R RSSRI R++ D D TP +
Sbjct: 176 T--PGHRRRLSDSADSNYERSPRIVEMDTCHRRSRSSRIAIRHSRDHSSDCLTPAPMPPA 233
Query: 226 PLSSPHLYCYKPPPSRHLQ-AEEHEHDARAQPKTTHNTPRLAAALPAGYHGPASP----- 279
PLS K PP +Q ++ HE D R KT HNTPRL A P PA+
Sbjct: 234 PLSCSSPISIKQPPRLSIQRSQHHERDTR-HAKTAHNTPRLGA--PPYGSSPANKSVDGM 290
Query: 280 AKGRVV------SPRYMADTASSVARARCQSAPRQRHGAAGEPRPSLARAGSRKSRPDSA 333
A+ R+ SPRYMA TASS AR RCQSAPRQR A P+ +R ++ DS
Sbjct: 291 ARARLSHRDALGSPRYMAGTASSAARTRCQSAPRQRQAAEA---PARSRRSCSRTTQDSG 347
Query: 334 ISLKSSEMSRHEDS-EFSDDVTRDYYLDQLW 363
+ SE SR S E SD+ RDYYLD++W
Sbjct: 348 FCFECSEDSRPGYSEELSDEAARDYYLDRMW 378
>Os01g0190500 IQ calmodulin-binding region domain containing protein
Length = 465
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 141/339 (41%), Gaps = 71/339 (20%)
Query: 84 AAVMIQKAFRGYXXXXXXXXXXXXVKIQALVRGYLVRKQAATTXXXXXX------XXXXX 137
AAV IQ AFRG+ VK+QALVRGYLVR+QAA T
Sbjct: 139 AAVKIQTAFRGFLAKKALRALKALVKLQALVRGYLVRRQAAATLQSMQALVRAQAAVRAA 198
Query: 138 XSSRAIKMASSRKSVE---------QERIVVQMQGGRVKTLTLPVVHRRRVS---DGGDI 185
SSR + QER M R + + RR+S +
Sbjct: 199 RSSRGAALPPLHLHHHPPVRPRYSLQERY---MDDTRSEHGV--AAYSRRLSASIESSSY 253
Query: 186 NFDRSPRIVEMDTCQLRCRSSRI-TSRYAADPPPDGTPGSVPLSSPHLYCYK-------- 236
+DRSP+IVEMDT + + RSS + TS D + +SSP L ++
Sbjct: 254 GYDRSPKIVEMDTGRPKSRSSSVRTSPPVVDAGAAEEWYANSVSSPLLPFHQLPGAPPRI 313
Query: 237 -PPPSRHLQAEEHEHDARAQPKTTHNTPRLAAALPAGYHGPASPAK------GRVVSPR- 288
P +RH + + +P T +TPRLA H P +P K G SP
Sbjct: 314 SAPSARHFPEYDWCPLEKPRPATAQSTPRLA-------HMPVTPTKSVCGGGGYGASPNC 366
Query: 289 --YMADTASSVARARCQSAPRQR-------------------HGAAGEPRPSLARAGSRK 327
YM+ T SS A+ R QSAP+QR E R SL+ G ++
Sbjct: 367 RGYMSSTQSSEAKVRSQSAPKQRPEPGVAGGTGGGARKRVPLSEVTLEARASLSGVGMQR 426
Query: 328 S--RPDSAISLKSSEMSRHE-DSEFSDDVTRDYYLDQLW 363
S R A + K++ +SR + SE + + RD +L + W
Sbjct: 427 SCNRVQEAFNFKTAVLSRFDRSSEPAAERDRDLFLQRRW 465
>Os05g0187500 IQ calmodulin-binding region domain containing protein
Length = 497
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 154/402 (38%), Gaps = 112/402 (27%)
Query: 54 GSRRPSVTAVVAGELSQVRPCSCGQQREVEAAVMIQKAFRGYXXXXXXXXXXXXVKIQAL 113
G P + A VAG+ + AAV IQ AFRG+ VK+QAL
Sbjct: 116 GRSAPVLAATVAGDTRSL----------AAAAVRIQTAFRGFLAKKALRALKALVKLQAL 165
Query: 114 VRGYLVRKQAATTXXXXXXXXXXXXSSRAIKMASS---------------RKSVEQERIV 158
VRGYLVR+QAA T + RA + + R+S+ + +
Sbjct: 166 VRGYLVRRQAAATLQSMQALVRAQATVRAHRSGAGAAANLPHLHHAPFWPRRSLVRRWLN 225
Query: 159 V-----------------QMQ-----GGRVKTLTLPVVHRRRVS---DGGDINFDRSPRI 193
+ MQ G ++ + RR+S + +DRSP+I
Sbjct: 226 LADDIAMYMFDVDVVCWRWMQQERCAGDDTRSEHGVAAYSRRLSASIESSSYGYDRSPKI 285
Query: 194 VEMDTCQLRCRSSR---------ITSRYAADPPPDGTPGSVPLSSPHLYCYKP------- 237
VE+DT + + RSS + + A D S +SSP L CY P
Sbjct: 286 VEVDTGRPKSRSSSSRRASSPLLLDAAGCASGGEDWCANS--MSSP-LPCYLPGGAPPPR 342
Query: 238 ---PPSRHLQAEEHEHDARAQPKTTHNTPRLAAALPAGYHGPASPAKGR----------- 283
P SRH + +A+P T +TPR A H P +P K
Sbjct: 343 IAVPTSRHFPDYDWCALEKARPATAQSTPRYA-------HAPPTPTKSVCGGGGGGGIHS 395
Query: 284 --VVSPRYMADTASSVARARCQSAPRQR------------------HGAAGEPRPSLARA 323
+ P YM++T S A+ R QSAP+QR E R SL+
Sbjct: 396 SPLNCPNYMSNTQSFEAKVRSQSAPKQRPETGGAGAGGGRKRVPLSEVVVVESRASLSGV 455
Query: 324 GSRKS--RPDSAISLKSSEMSRHEDSEFSDDVTRDYYLDQLW 363
G ++S R A + K++ + R + S S + R +L + W
Sbjct: 456 GMQRSCNRVQEAFNFKTAVVGRLDRSSESGENDRHAFLQRRW 497
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.129 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,920,226
Number of extensions: 596703
Number of successful extensions: 3047
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 3040
Number of HSP's successfully gapped: 4
Length of query: 363
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 261
Effective length of database: 11,709,973
Effective search space: 3056302953
Effective search space used: 3056302953
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)