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Os05g0521900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : IQ calmodulin-binding region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.28 (0.0329) R2 : 0.786
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.4 (0.114) R2dC : 0.366 R2C : 0.651
β3 : 1.7 (0.134) R2dE : 0.131 R2E : 0.419
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.195 (0.0691) R2dN8 : 0.00506 R2N8 : -0.000679
σ : 0.616
deviance : 174.97
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_____
C
peak time of C : 5.96
E
wheather : wind
threshold : 4.368
memory length : 78
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 3.12
open length of G : 3.96

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
170.13 0.613 7.29 -0.194 2.38 1.62 0.951 0.569 -0.223 6.03 4.976 89 3.02 3.96
170.33 0.608 7.29 -0.234 2.39 1.66 1.2 -- -0.225 6.04 4.726 88 3.02 3.93
171.4 0.61 7.29 -0.152 2.37 1.6 -- 1.32 -0.216 6 5.206 88 3.02 4.02
173.76 0.614 7.29 -0.206 2.36 1.7 -- -- -0.233 5.99 4.683 82 3.1 3.98
275.05 0.772 7.44 -0.488 -- 3.01 -- -1.18 -0.28 -- 10.07 266 0.47 6.23
228.81 0.709 7.27 -0.125 3.34 -- 1.61 -- -0.197 5.89 -- -- -- --
235.11 0.718 7.27 -0.114 3.35 -- -- -- -0.203 5.85 -- -- -- --
251.58 0.739 7.38 -0.247 -- 3.24 -- -- -0.366 -- 13.64 298 0.215 6.53
174.97 0.616 7.28 -- 2.4 1.7 -- -- -0.195 5.96 4.368 78 3.12 3.96
815.27 1.33 7.32 -0.0119 -- -- -- -- -0.125 -- -- -- -- --
235.45 0.718 7.27 -- 3.34 -- -- -- -0.191 5.85 -- -- -- --
240.59 0.722 7.37 -- -- 3.29 -- -- -0.343 -- 14.5 330 0.0166 7.13
815.27 1.33 7.32 -- -- -- -- -- -0.124 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 170.22 wind 5.0 90 < th dose dependent rect. 3 4
3 171.91 radiation 40.0 90 < th dose dependent rect. 3 10
9 173.71 wind 5.0 90 < th dose independent rect. 3 4
13 174.95 wind 3.0 10 < th dose dependent rect. 4 3
14 175.01 temperature 10.0 90 > th dose dependent rect. 3 4
16 175.36 precipitation 0.1 90 < th dose independent rect. 3 4
17 175.36 precipitation 0.1 90 < th dose dependent rect. 3 4
19 175.57 wind 9.0 90 < th dose independent rect. 7 20
27 176.48 humidity 60.0 90 > th dose dependent rect. 21 6
29 176.73 temperature 25.0 270 < th dose independent rect. 2 3
31 176.88 radiation 10.0 90 < th dose independent rect. 3 8
33 177.02 humidity 90.0 720 < th dose dependent rect. 18 3
35 177.03 temperature 10.0 90 > th dose independent rect. 3 4
38 177.03 humidity 50.0 90 > th dose independent rect. 3 4
40 177.03 atmosphere 995.0 90 > th dose independent rect. 3 4
41 177.03 atmosphere 1015.0 90 < th dose independent rect. 3 4
42 177.03 radiation 40.0 90 < th dose independent rect. 3 4
43 177.03 temperature 10.0 90 > th dose independent rect. 7 20
57 177.59 radiation 30.0 270 < th dose dependent rect. 1 10
58 177.64 radiation 30.0 90 < th dose dependent rect. 3 6
65 177.76 humidity 50.0 90 > th dose dependent rect. 3 4
66 177.81 radiation 40.0 90 < th dose dependent rect. 3 4
71 178.06 wind 9.0 270 < th dose independent rect. 5 21
80 178.39 radiation 10.0 90 < th dose independent rect. 3 6
97 179.00 wind 5.0 270 < th dose independent rect. 1 5
105 179.15 precipitation 0.1 90 < th dose independent rect. 3 18
106 179.15 precipitation 0.1 90 < th dose dependent rect. 3 18
108 179.27 humidity 60.0 90 > th dose dependent rect. 3 9
110 179.31 atmosphere 1005.0 90 > th dose independent rect. 3 4
117 179.45 radiation 40.0 90 < th dose independent rect. 3 18
123 179.55 wind 7.0 270 < th dose dependent rect. 1 5
124 179.61 radiation 10.0 270 < th dose independent rect. 1 10
128 179.68 precipitation 0.1 90 < th dose independent rect. 7 20
129 179.68 precipitation 0.1 90 < th dose dependent rect. 7 20
137 179.77 temperature 10.0 90 > th dose dependent rect. 21 6
141 179.88 temperature 15.0 10 > th dose dependent rect. 4 3
158 179.91 temperature 10.0 270 > th dose independent rect. 5 21
161 179.93 humidity 50.0 90 > th dose dependent rect. 19 8
174 180.11 wind 1.0 270 > th dose independent rect. 3 1
182 180.30 temperature 30.0 720 > th dose dependent rect. 18 1
198 180.33 temperature 15.0 90 > th dose independent rect. 3 18
202 180.42 temperature 20.0 90 > th dose independent rect. 21 6
205 180.46 temperature 10.0 90 > th dose independent rect. 21 6
206 180.46 temperature 30.0 90 < th dose independent rect. 21 6
207 180.46 humidity 50.0 90 > th dose independent rect. 21 6
210 180.46 atmosphere 995.0 90 > th dose independent rect. 21 6
211 180.46 radiation 1.0 90 < th dose independent rect. 21 6
217 180.46 atmosphere 1015.0 90 < th dose independent rect. 3 18
218 180.46 radiation 1.0 90 < th dose dependent rect. 21 6
223 180.47 atmosphere 1005.0 270 > th dose independent rect. 3 2
225 180.50 precipitation 0.1 90 < th dose independent rect. 21 6
226 180.50 precipitation 0.1 90 < th dose dependent rect. 21 6
229 180.51 wind 9.0 90 < th dose independent rect. 21 6
236 180.57 radiation 10.0 10 < th dose independent rect. 4 4
255 180.93 atmosphere 995.0 90 > th dose independent rect. 3 18
267 181.20 wind 9.0 10 < th dose independent rect. 7 21
271 181.24 temperature 20.0 270 > th dose independent rect. 21 4
331 181.90 radiation 40.0 90 < th dose dependent rect. 3 18
333 181.92 temperature 20.0 10 > th dose independent rect. 4 3
347 182.13 precipitation 0.1 10 < th dose independent rect. 4 3
348 182.13 precipitation 0.1 10 < th dose dependent rect. 4 3
351 182.18 atmosphere 1015.0 90 < th dose independent rect. 7 20
359 182.29 wind 9.0 90 < th dose dependent rect. 21 6
368 182.41 temperature 10.0 10 > th dose independent rect. 4 3
370 182.41 temperature 30.0 10 < th dose independent rect. 4 3
371 182.41 humidity 50.0 10 > th dose independent rect. 4 3
374 182.41 atmosphere 995.0 10 > th dose independent rect. 4 3
375 182.41 atmosphere 1015.0 10 < th dose independent rect. 4 3
379 182.41 temperature 10.0 10 > th dose independent rect. 7 21
380 182.42 humidity 60.0 90 > th dose dependent rect. 3 12
389 182.49 humidity 50.0 10 > th dose dependent rect. 4 3
394 182.57 wind 9.0 90 < th dose independent rect. 3 18
403 182.79 precipitation 0.1 90 < th dose independent rect. 3 16
406 182.79 precipitation 0.1 90 < th dose dependent rect. 3 16
407 182.80 precipitation 0.1 270 < th dose independent rect. 1 5
408 182.80 precipitation 0.1 270 < th dose dependent rect. 1 5
409 182.81 precipitation 0.1 270 < th dose independent rect. 15 14
411 182.81 precipitation 0.1 270 < th dose dependent rect. 15 14
418 182.94 radiation 30.0 10 < th dose dependent rect. 4 4
425 183.10 radiation 40.0 90 < th dose dependent rect. 3 16
441 183.32 humidity 50.0 10 > th dose dependent rect. 21 7
453 183.50 wind 9.0 270 < th dose independent rect. 5 10
459 183.57 humidity 60.0 270 > th dose dependent rect. 21 4
477 183.63 radiation 40.0 90 < th dose independent rect. 3 16
489 183.71 precipitation 0.1 270 < th dose independent rect. 5 21
490 183.71 precipitation 0.1 270 < th dose dependent rect. 5 21
500 183.83 radiation 1.0 270 < th dose dependent rect. 5 21
540 184.01 atmosphere 995.0 90 > th dose dependent rect. 3 4
545 184.10 humidity 80.0 720 < th dose independent rect. 18 3
546 184.11 wind 9.0 90 < th dose dependent rect. 19 8
547 184.12 atmosphere 1010.0 270 < th dose independent rect. 1 5
552 184.25 atmosphere 995.0 90 > th dose independent rect. 7 20
563 184.34 precipitation 0.1 270 < th dose independent rect. 1 20
564 184.34 precipitation 0.1 270 < th dose dependent rect. 1 20
567 184.36 atmosphere 1005.0 10 > th dose independent rect. 4 3
569 184.37 precipitation 0.1 270 < th dose independent rect. 5 10
570 184.37 radiation 10.0 90 < th dose independent rect. 3 18
571 184.37 precipitation 0.1 270 < th dose dependent rect. 5 10
584 184.45 radiation 10.0 270 < th dose independent rect. 1 5
586 184.46 temperature 10.0 270 > th dose independent rect. 1 5
589 184.46 humidity 50.0 270 > th dose independent rect. 1 5
592 184.46 atmosphere 995.0 270 > th dose independent rect. 1 5
599 184.48 atmosphere 995.0 90 > th dose independent rect. 3 16
604 184.52 radiation 40.0 270 < th dose independent rect. 14 15
608 184.58 atmosphere 1005.0 10 > th dose independent rect. 3 5
611 184.59 precipitation 0.1 90 < th dose independent rect. 19 8
612 184.59 temperature 10.0 270 > th dose independent rect. 5 10
613 184.59 atmosphere 1015.0 270 < th dose independent rect. 5 10
614 184.59 temperature 10.0 270 > th dose independent rect. 15 14
615 184.59 precipitation 0.1 90 < th dose dependent rect. 19 8
625 184.67 radiation 40.0 270 < th dose dependent rect. 1 5
650 184.82 precipitation 0.1 270 < th dose independent rect. 1 18
655 184.82 precipitation 0.1 270 < th dose dependent rect. 1 18
660 184.87 atmosphere 1015.0 90 < th dose independent rect. 21 6
673 184.97 temperature 10.0 90 > th dose independent rect. 19 8
674 184.97 temperature 30.0 90 < th dose independent rect. 19 8
675 184.97 humidity 50.0 90 > th dose independent rect. 19 8
677 184.97 atmosphere 995.0 90 > th dose independent rect. 19 8
678 184.97 radiation 1.0 90 < th dose independent rect. 19 8
683 184.97 temperature 10.0 90 > th dose independent rect. 3 16
685 184.97 atmosphere 1015.0 90 < th dose independent rect. 3 16
687 184.97 radiation 1.0 90 < th dose dependent rect. 19 8
694 184.99 wind 9.0 90 < th dose independent rect. 19 8
727 185.14 wind 9.0 90 < th dose dependent rect. 3 18
743 185.16 humidity 60.0 90 > th dose dependent rect. 3 14
783 185.42 precipitation 0.1 10 < th dose independent rect. 7 21
784 185.42 precipitation 0.1 10 < th dose dependent rect. 7 21
793 185.50 precipitation 0.1 10 < th dose independent rect. 4 17
798 185.50 wind 9.0 90 < th dose dependent rect. 3 16
799 185.50 precipitation 0.1 10 < th dose dependent rect. 4 17
820 185.65 humidity 50.0 90 > th dose dependent rect. 3 16
837 185.84 atmosphere 1015.0 90 < th dose dependent rect. 3 4
840 185.87 radiation 40.0 90 < th dose dependent rect. 3 14
875 186.05 temperature 10.0 270 > th dose dependent rect. 21 3
895 186.13 atmosphere 995.0 270 > th dose independent rect. 5 9
899 186.15 humidity 50.0 270 > th dose dependent rect. 1 5
901 186.16 temperature 10.0 10 > th dose independent rect. 21 7
902 186.16 temperature 30.0 10 < th dose independent rect. 21 7
903 186.16 humidity 50.0 10 > th dose independent rect. 21 7
906 186.16 atmosphere 995.0 10 > th dose independent rect. 21 7
907 186.16 radiation 1.0 10 < th dose independent rect. 21 7
913 186.16 temperature 10.0 10 > th dose independent rect. 4 17
915 186.16 atmosphere 1015.0 10 < th dose independent rect. 4 17
916 186.16 radiation 1.0 10 < th dose dependent rect. 21 7
927 186.19 wind 9.0 10 < th dose independent rect. 21 7
947 186.29 atmosphere 1015.0 10 < th dose dependent rect. 4 3
952 186.31 atmosphere 995.0 10 > th dose independent rect. 4 17
971 186.42 radiation 10.0 10 < th dose independent rect. 4 18
977 186.47 temperature 10.0 270 > th dose dependent rect. 19 6
993 186.55 radiation 10.0 90 < th dose independent rect. 3 16