Os05g0187500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : IQ calmodulin-binding region domain containing protein.
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Os05g0187500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : IQ calmodulin-binding region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.87 | 0.564 | 6.15 | 0.48 | 1.09 | 1.42 | -0.00877 | 0.0185 | -0.303 | 10.3 | 22.32 | 1946 | -- | -- |
| 143.85 | 0.559 | 6.15 | 0.485 | 1.09 | 1.42 | -0.0052 | -- | -0.302 | 10.3 | 22.31 | 1937 | -- | -- |
| 143.83 | 0.559 | 6.15 | 0.497 | 1.09 | 1.44 | -- | 0.0483 | -0.307 | 10.3 | 22.29 | 1943 | -- | -- |
| 143.84 | 0.559 | 6.15 | 0.513 | 1.09 | 1.44 | -- | -- | -0.303 | 10.3 | 22.28 | 1943 | -- | -- |
| 190.1 | 0.642 | 6.17 | 0.46 | -- | 1.57 | -- | -0.0555 | -0.272 | -- | 22.2 | 853 | -- | -- |
| 220.39 | 0.696 | 6.26 | -0.0585 | 1.16 | -- | -0.042 | -- | -0.804 | 10.3 | -- | -- | -- | -- |
| 220.4 | 0.695 | 6.26 | -0.0603 | 1.16 | -- | -- | -- | -0.804 | 10.3 | -- | -- | -- | -- |
| 190.1 | 0.642 | 6.18 | 0.436 | -- | 1.56 | -- | -- | -0.282 | -- | 22.25 | 852 | -- | -- |
| 149.55 | 0.57 | 6.16 | -- | 1.08 | 1.32 | -- | -- | -0.378 | 10.3 | 22.3 | 1937 | -- | -- |
| 302.09 | 0.812 | 6.29 | -0.0775 | -- | -- | -- | -- | -0.807 | -- | -- | -- | -- | -- |
| 220.5 | 0.695 | 6.26 | -- | 1.16 | -- | -- | -- | -0.798 | 10.3 | -- | -- | -- | -- |
| 194.83 | 0.65 | 6.19 | -- | -- | 1.48 | -- | -- | -0.349 | -- | 22.2 | 852 | -- | -- |
| 302.25 | 0.811 | 6.29 | -- | -- | -- | -- | -- | -0.799 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.32 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 3 | 146.35 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 6 | 146.90 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 12 | 147.56 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 34 | 148.26 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 39 | 148.41 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 45 | 148.60 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 48 | 148.64 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 52 | 148.85 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 54 | 148.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 58 | 148.94 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 72 | 149.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 73 | 149.13 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 78 | 149.19 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 9 |
| 103 | 149.39 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 134 | 149.66 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 142 | 149.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 14 |
| 145 | 149.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 238 | 150.21 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 241 | 150.22 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 281 | 150.35 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 306 | 150.42 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 310 | 150.43 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 341 | 150.48 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 380 | 150.59 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 386 | 150.61 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 405 | 150.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 8 |
| 533 | 150.98 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 645 | 151.21 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 667 | 151.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 668 | 151.26 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 836 | 151.60 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |