BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0476100 Os05g0476100|AK064010
(566 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0476100 Protein of unknown function DUF827, plant fami... 1025 0.0
Os03g0339700 Protein of unknown function DUF827, plant fami... 194 2e-49
Os07g0677900 Protein of unknown function DUF827, plant fami... 188 1e-47
>Os05g0476100 Protein of unknown function DUF827, plant family protein
Length = 566
Score = 1025 bits (2650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/566 (90%), Positives = 512/566 (90%)
Query: 1 MAEVAATQHGHAVAARAMPGRGEVDTSSPFESVRQAVDLFGGGALSPWRXXXXXXXXXXX 60
MAEVAATQHGHAVAARAMPGRGEVDTSSPFESVRQAVDLFGGGALSPWR
Sbjct: 1 MAEVAATQHGHAVAARAMPGRGEVDTSSPFESVRQAVDLFGGGALSPWRHHHPPPPPPPP 60
Query: 61 XLQLRPEEVELMKVEEQTVKLEMELFVKEKETFKVLKELQATKQVADNLKLQLEKXXXXX 120
LQLRPEEVELMKVEEQTVKLEMELFVKEKETFKVLKELQATKQVADNLKLQLEK
Sbjct: 61 PLQLRPEEVELMKVEEQTVKLEMELFVKEKETFKVLKELQATKQVADNLKLQLEKAASES 120
Query: 121 XXXXRGHSDAGKVYPLPDTERKCSYHTGQPVESAKGNQSALTTLIKLNQAKAFLNMDTVM 180
RGHSDAGKVYPLPDTERKCSYHTGQPVESAKGNQSALTTLIKLNQAKAFLNMDTVM
Sbjct: 121 AASARGHSDAGKVYPLPDTERKCSYHTGQPVESAKGNQSALTTLIKLNQAKAFLNMDTVM 180
Query: 181 TIKRQIEEEKGSLEKTRERLQLNRAKASSLEADLNKIVSQLQAARGPKPTLEPSDIWLQM 240
TIKRQIEEEKGSLEKTRERLQLNRAKASSLEADLNKIVSQLQAARGPKPTLEPSDIWLQM
Sbjct: 181 TIKRQIEEEKGSLEKTRERLQLNRAKASSLEADLNKIVSQLQAARGPKPTLEPSDIWLQM 240
Query: 241 KQLNSEKEKHRKIADDSKNEIGELTATIEHTKSRTKTLQFRIVMAEKLKEASRRGEALAL 300
KQLNSEKEKHRKIADDSKNEIGELTATIEHTKSRTKTLQFRIVMAEKLKEASRRGEALAL
Sbjct: 241 KQLNSEKEKHRKIADDSKNEIGELTATIEHTKSRTKTLQFRIVMAEKLKEASRRGEALAL 300
Query: 301 AERKNLSNGEHEASTASDVTLSVEEHSVLVQKAEEADAACRKKIDAAMQELDQANRGKLE 360
AERKNLSNGEHEASTASDVTLSVEEHSVLVQKAEEADAACRKKIDAAMQELDQANRGKLE
Sbjct: 301 AERKNLSNGEHEASTASDVTLSVEEHSVLVQKAEEADAACRKKIDAAMQELDQANRGKLE 360
Query: 361 LLERVEEAMAAVETSRKALEEALKREESTNKAKLVAEESLRKLRSEQIIQNWRPTGNXXX 420
LLERVEEAMAAVETSRKALEEALKREESTNKAKLVAEESLRKLRSEQIIQNWRPTGN
Sbjct: 361 LLERVEEAMAAVETSRKALEEALKREESTNKAKLVAEESLRKLRSEQIIQNWRPTGNSSV 420
Query: 421 XXXXXXXXXXXXXXHRRAGSGIYDVNGLSLVTATPKSTKAMSIGQILSMKLDHRELEVXX 480
HRRAGSGIYDVNGLSLVTATPKSTKAMSIGQILSMKLDHRELEV
Sbjct: 421 KFKTSAATTAAVVAHRRAGSGIYDVNGLSLVTATPKSTKAMSIGQILSMKLDHRELEVAG 480
Query: 481 XXXXXXXXVSLGQILSQKYDALSPLRIDHGGASRRQFHPRRRKLGFVVYALLLAKHRHRK 540
VSLGQILSQKYDALSPLRIDHGGASRRQFHPRRRKLGFVVYALLLAKHRHRK
Sbjct: 481 KGGGAKKKVSLGQILSQKYDALSPLRIDHGGASRRQFHPRRRKLGFVVYALLLAKHRHRK 540
Query: 541 KRQPXXXXXXDSSSCTHGSFSTKAVY 566
KRQP DSSSCTHGSFSTKAVY
Sbjct: 541 KRQPAAAAAADSSSCTHGSFSTKAVY 566
>Os03g0339700 Protein of unknown function DUF827, plant family protein
Length = 544
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 186/544 (34%), Positives = 292/544 (53%), Gaps = 46/544 (8%)
Query: 24 VDTSSPFESVRQAVDLFGGGALSPWRXXXXXXXXXXXXLQLRPEEV-ELMKVEEQTVKLE 82
+DTS+PFESVR+AVD FGG A W + + EE + + ++EQ +LE
Sbjct: 21 IDTSAPFESVREAVDRFGGSA--AWSSHLIRRMFAPPNPKEQSEESKQPVDIKEQAAQLE 78
Query: 83 MELFVKEKETFKVLKELQATKQVADNLKLQLEKXXXXXXXXXRGHSDAGKVYPLPDTERK 142
+L +KEKET VLKEL++TK++ +LK +++K D ++ P+ ++E +
Sbjct: 79 HDLIIKEKETLDVLKELESTKKIIADLKQRIQKESNETSPSAVKSDDQSEI-PITESEEQ 137
Query: 143 C--SYHTGQPVESAKGNQSALT--TLIKLNQAKAFLNMDT---------VMTIKRQIEEE 189
+ + +E + L+ L++L QAKA LN T + + I +E
Sbjct: 138 KPENVNIDMDMEGLDEHPQPLSGSVLLELEQAKANLNRTTGDLAAVRAAIELLHNSIAKE 197
Query: 190 KGSLEKTRERLQLNRAKASSLEADLNKIVSQLQAARGPKPTLE-PSDIWLQMKQLNSEKE 248
K LE++RE+L N A ASSLE +L++ +LQ + + E PSDI++++K++ SE +
Sbjct: 198 KLLLERSREKLSSNTALASSLEDELDQTTQKLQTLKDLQARREDPSDIFIEIKKMASEVQ 257
Query: 249 KHRKIADDSKNEIGELTATIEHTKSRTKTLQFRIVMAEKLKEASRRGEALALAERKNL-- 306
+ R +A+ SK+E L A IE TK+ T + R + A+K++EA+R EALALAE K L
Sbjct: 258 QLRGMANASKSEAMMLAAEIEQTKASIGTAEIRCIAAKKMEEAARAAEALALAEIKALLS 317
Query: 307 --SNGEHEASTASDVTLSVEEHSVLVQKAEEADAACRKKIDAAMQELDQANRGKLELLER 364
S+ E +S VTLS EE+ L KA+EAD RKK++ AM ++D AN + + +++
Sbjct: 318 SESSSECGSSVCDGVTLSAEEYFTLCSKAQEADENSRKKVEEAMLQVDVANSSETDSVKK 377
Query: 365 VEEAMAAVETSRKALEEALKREESTNKAKLVAEESLRKLRSEQIIQNWRPTGNXXXXXXX 424
+++A VE ++AL+EALKR E+ N+ KL +E LR+ +SE N
Sbjct: 378 LDDARLEVEECKRALQEALKRVEAANRGKLAVDEILRRWKSE----------NGHKRRSI 427
Query: 425 XXXXXXXXXXHRRAGSGIYDVNGLSLVTATPKSTK-AMSIGQILSMKL---DHRELEVXX 480
RR S D+ + A+ S K +SIGQILSMKL + + +
Sbjct: 428 GGSPKFKNAAQRRKDSHSMDI----ISDASTNSCKQTLSIGQILSMKLMGPEGYDKTIWD 483
Query: 481 XXXXXXXXVSLGQILSQKYDALSPLRIDHGGASRRQFHPRRRKLGFVVYALLLAKH-RHR 539
VSLGQIL++ LS A R++ +R+K ++LLAK +++
Sbjct: 484 DKTSEMPNVSLGQILNRGR-VLSR----EETAVRKRVSGKRKKFALTGLSVLLAKQAKNK 538
Query: 540 KKRQ 543
KKR+
Sbjct: 539 KKRE 542
>Os07g0677900 Protein of unknown function DUF827, plant family protein
Length = 519
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 282/543 (51%), Gaps = 61/543 (11%)
Query: 21 RGEVDTSSPFESVRQAVDLFGGGALSPWRXXXXXXXXXXXXLQLRPEEVELMKVEEQTVK 80
R E+DTS+PFESVR+AVD FGGGA + W + P+E + M QT++
Sbjct: 17 RAEIDTSAPFESVREAVDHFGGGAAAVW------SSCLVNRMLTPPKEHDQMN--GQTLQ 68
Query: 81 LEMELFVKEKETFKVLKELQATKQVADNLKLQLEKXXXXXXXXXRGHSDAGKVYPLPDTE 140
LE EL +KE +T VLKEL+++K++ +LKL+++ G ++A P E
Sbjct: 69 LEKELIIKESQTLDVLKELESSKRIISDLKLKVQNDSAITGHP--GQTEAPGAGP---EE 123
Query: 141 RKCSYHTGQPVE----SAKGNQSALTTLIKLNQAKAFLNMDT---------VMTIKRQIE 187
R+ S + E ++ Q + L++L QAKA+L T V ++ +I
Sbjct: 124 RRSSENVETDGELGGLDSQNLQPPSSVLMQLEQAKAYLTRTTADLAEIRASVESLCNEIA 183
Query: 188 EEKGSLEKTRERLQLNRAKASSLEADLNKIVSQLQAARGPKPTLEPSD-IWLQMKQLNSE 246
+EK +E++RE++ N + SSLE +L++ +LQ + E S I +++K++ SE
Sbjct: 184 KEKILVERSREKVCSNTSLISSLEGELDRTTHKLQTLNDRQRRREDSSHILMEIKKVTSE 243
Query: 247 KEKHRKIADDSKNEIGELTATIEHTKSRTKTLQFRIVMAEKLKEASRRGEALALAERKNL 306
E+ + ++ SK+E L A IE TK+ T + R + A+K+++A+R EALALAE K L
Sbjct: 244 IEQLKSASNASKSEATMLAAEIEQTKASIATAEVRCLAAKKMEDAARAAEALALAEIKAL 303
Query: 307 SNGEHEAST---ASDVTLSVEEHSVLVQKAEEADAACRKKIDAAMQELDQANRGKLELLE 363
+GE A V LS+E++ L KA+E D + RKKI+AAM ++++ANR K L
Sbjct: 304 LSGEASAGDLQGTDGVNLSLEKYFELASKAQECDVSSRKKIEAAMLQVEEANRSKSNSLN 363
Query: 364 RVEEAMAAVETSRKALEEALKREESTNKAKLVAEESLRKLRSEQIIQNWRPTGNXXXXXX 423
++EEA E + AL++ALKR + N+ KL EES+R+ SE
Sbjct: 364 KLEEAKLEFEKCKIALQDALKRAHAANRGKLAVEESVRRWLSE----------------S 407
Query: 424 XXXXXXXXXXXHRRAGSGIYDVNGLSLVTATPKSTKAMSIGQILSMKL---DHRELEVXX 480
+ + I DV+ S + T +SIGQIL++KL D + V
Sbjct: 408 GYKRHSFHDSSKLKNAADITDVSK-SFLKPT------LSIGQILNLKLMGPDGYDKSV-W 459
Query: 481 XXXXXXXXVSLGQILSQKYDALSPLRIDHGGASRRQFHPRRRKLGFVVYALLLAKHRHRK 540
VSLGQIL+++ I S++ +R+K F ++LLAK R+
Sbjct: 460 DDTTEASNVSLGQILNRRNAVFCNSDI----TSQKILSGKRKKFAFTGLSVLLAKQAKRQ 515
Query: 541 KRQ 543
+++
Sbjct: 516 EQE 518
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.312 0.126 0.338
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,920,660
Number of extensions: 519053
Number of successful extensions: 2051
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 2022
Number of HSP's successfully gapped: 8
Length of query: 566
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 460
Effective length of database: 11,501,117
Effective search space: 5290513820
Effective search space used: 5290513820
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 159 (65.9 bits)