BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0427100 Os05g0427100|AK120642
(366 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0427100 Octicosapeptide/Phox/Bem1p domain containing p... 487 e-138
Os02g0766800 179 4e-45
Os12g0594300 Octicosapeptide/Phox/Bem1p domain containing p... 118 7e-27
Os11g0444700 Octicosapeptide/Phox/Bem1p domain containing p... 110 2e-24
Os07g0438500 Octicosapeptide/Phox/Bem1p domain containing p... 109 3e-24
Os11g0444900 Octicosapeptide/Phox/Bem1p domain containing p... 109 4e-24
Os01g0139200 Octicosapeptide/Phox/Bem1p domain containing p... 103 2e-22
Os03g0691650 100 2e-21
Os07g0556300 Octicosapeptide/Phox/Bem1p domain containing p... 100 2e-21
Os02g0809100 Octicosapeptide/Phox/Bem1p domain containing p... 94 1e-19
>Os05g0427100 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 366
Score = 487 bits (1253), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/366 (71%), Positives = 260/366 (71%)
Query: 1 MAARPXXXXXXXXXXXXXVHLSPTSICSXXXXXXXXXXXXSRIKILCSFGGRIMPRPSDG 60
MAARP VHLSPTSICS SRIKILCSFGGRIMPRPSDG
Sbjct: 1 MAARPTTSESGSTTTDDDVHLSPTSICSGGGGGACVVVGGSRIKILCSFGGRIMPRPSDG 60
Query: 61 ALKYIGGETRVLAVPRSIPFSDLKKKVEEMFRTEVAAIKYQLVAEDLDVLVSVTCDEDLT 120
ALKYIGGETRVLAVPRSIPFSDLKKKVEEMFRTEVAAIKYQLVAEDLDVLVSVTCDEDLT
Sbjct: 61 ALKYIGGETRVLAVPRSIPFSDLKKKVEEMFRTEVAAIKYQLVAEDLDVLVSVTCDEDLT 120
Query: 121 HMLDEYDRFEAKRSPSASPRFRVYVFSSQPPVAAAVPSTSRHAGYAPPASXXXXXXXXXX 180
HMLDEYDRFEAKRSPSASPRFRVYVFSSQPPVAAAVPSTSRHAGYAPPAS
Sbjct: 121 HMLDEYDRFEAKRSPSASPRFRVYVFSSQPPVAAAVPSTSRHAGYAPPASHHHLLQHHLH 180
Query: 181 XFQPDHYVATPDGSPPYAGHSHGAVSAGNSPRADAVGPDHPAVFGLKMQRVRSTPNLGSL 240
FQPDHYVATPDGSPPYAGHSHGAVSAGNSPRADAVGPDHPAVFGLKMQRVRSTPNLGSL
Sbjct: 181 HFQPDHYVATPDGSPPYAGHSHGAVSAGNSPRADAVGPDHPAVFGLKMQRVRSTPNLGSL 240
Query: 241 DASPQHYHQHAADVXXXXXXXXXXXXXSSPVHAGAGHLVSQGGFHSYYHPHGQYXXXXXX 300
DASPQHYHQHAADV SSPVHAGAGHLVSQGGFHSYYHPHGQY
Sbjct: 241 DASPQHYHQHAADVGGGGGGMAGYMGGSSPVHAGAGHLVSQGGFHSYYHPHGQYAPAPVP 300
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNEMHTPKN 360
YNEMHTPKN
Sbjct: 301 VPHHAGVGRYDTRGGGGYVRGSNYVAAPPPPMMPVAVRSGRPVSRGGGAPPYNEMHTPKN 360
Query: 361 ATTIWD 366
ATTIWD
Sbjct: 361 ATTIWD 366
>Os02g0766800
Length = 200
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/155 (67%), Positives = 110/155 (70%), Gaps = 13/155 (8%)
Query: 23 PTSICSXXXXXXXXXXXXSRIKILCSFGGRIMPRPSDGALKYIGGETRVLAVPRSIPFS- 81
PTSICS SRIKILCSFGGRIMP PSD ALKYI ETR+LAVPRSIPFS
Sbjct: 29 PTSICSGGGRGACVDGG-SRIKILCSFGGRIMPCPSDDALKYIDSETRILAVPRSIPFSP 87
Query: 82 --DLKKKVEEMFRTEVAAIKYQLVAEDLDVLVSVTCDEDLTHMLDEYDRFEAKRSPSASP 139
DLKKKVEEMFRTEVA +VAEDLDVLVSVT DEDLTHMLDEYD + KRSPSASP
Sbjct: 88 RADLKKKVEEMFRTEVA-----VVAEDLDVLVSVTWDEDLTHMLDEYDCSKEKRSPSASP 142
Query: 140 RFRVYVFSSQ----PPVAAAVPSTSRHAGYAPPAS 170
RFRVY+FSS AA VPS R + A+
Sbjct: 143 RFRVYIFSSHGSACTTTAAPVPSPRRRRTWGAIAT 177
>Os12g0594300 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 1133
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Query: 42 RIKILCSFGGRIMPRPSDGALKYIGGETRVLAVPRSIPFSDLKKKVEEMFRTEVAAIKYQ 101
+ K +CSFGG+IMPRPSDG L+Y+GGETR++++PR+ +++L +K +++ ++ IKYQ
Sbjct: 115 KAKFMCSFGGKIMPRPSDGKLRYVGGETRLISIPRNFSWNELVQKTLKIY-SQPHIIKYQ 173
Query: 102 LVAEDLDVLVSVTCDEDLTHMLDEYDRFEAKRSPSASPRFRVYVFS 147
L EDLD L+S++CDEDL +M++EY E S SPR R+++ S
Sbjct: 174 LPEEDLDALISLSCDEDLQNMMEEYSSLEKANS---SPRLRIFLVS 216
>Os11g0444700 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 224
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
Query: 43 IKILCSFGGRIMPRPSDGALKYIGGETRVLAVPRSIPFSDLKKKVEEMFRTEVAAIKYQL 102
+K LCS+GGRI+PR +DGAL+Y+GG+ RV++V RS+PF +L++K+ EM E ++ QL
Sbjct: 40 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQL 99
Query: 103 VAEDLDVLVSVTCDEDLTHMLDEYDRFEAKRSPSASPRFRVYVF 146
EDLD LVSV D+DL ++L+EYD A R + R ++F
Sbjct: 100 PTEDLDALVSVNGDDDLANLLEEYD--AASRDRLQPLKIRAFLF 141
>Os07g0438500 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 862
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 75/107 (70%), Gaps = 4/107 (3%)
Query: 42 RIKILCSFGGRIMPRPSDGALKYIGGETRVLAVPRSIPFSDLKKKVEEMFRTEVAAIKYQ 101
RIKILCSFGG+I+PRPSDG L+Y+GGET ++ + R+I + +LK+K ++ + IKYQ
Sbjct: 165 RIKILCSFGGKILPRPSDGKLRYVGGETHIIRISRNISWQELKQKTTAIY-NQPHVIKYQ 223
Query: 102 LVAEDLDVLVSVTCDEDLTHMLDEYDRFEAKRSPSASPRFRVYVFSS 148
L EDLD L+SV+ DEDL +M++E + + S + R+++ SS
Sbjct: 224 LPGEDLDALISVSNDEDLRNMMEECGFLD---NGEGSQKLRIFLVSS 267
>Os11g0444900 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 108
Score = 109 bits (272), Expect = 4e-24, Method: Composition-based stats.
Identities = 47/85 (55%), Positives = 67/85 (78%)
Query: 43 IKILCSFGGRIMPRPSDGALKYIGGETRVLAVPRSIPFSDLKKKVEEMFRTEVAAIKYQL 102
+K LCS+GGRI+PR +DGAL+Y+GG+ RV++V RS+PF +L++K+ EM E ++ QL
Sbjct: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQL 81
Query: 103 VAEDLDVLVSVTCDEDLTHMLDEYD 127
EDLD LVSVT D+DL ++L+EYD
Sbjct: 82 PTEDLDALVSVTGDDDLANLLEEYD 106
>Os01g0139200 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 671
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 78/113 (69%), Gaps = 4/113 (3%)
Query: 42 RIKILCSFGGRIMPRPSDGALKYIGGETRVLAVPRSIPFSDLKKKV-EEMFRTEVAAIKY 100
R++++CSFGGRI+PRP+D +L Y+GGETR++AV R+ +D+ ++ + + +KY
Sbjct: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKY 114
Query: 101 QLVAEDLDVLVSVTCDEDLTHMLDEYDRFEA---KRSPSASPRFRVYVFSSQP 150
QL EDLD L+SV+ DEDL +++DEYDR A S + R R+++F ++P
Sbjct: 115 QLPNEDLDSLISVSTDEDLDNLVDEYDRIAATSSGGGSSRTSRIRLFLFPAKP 167
>Os03g0691650
Length = 250
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 8/111 (7%)
Query: 43 IKILCSFGGRIMPRPSDGALKYIGGETRVLAVPRSIPFSDLKKKVEEMFRT---EVAAIK 99
+++LCS GGR++P G L+Y+GGETR LAVPR PF +L ++ E V A++
Sbjct: 1 MRLLCSHGGRLVPCGPGGGLRYVGGETRALAVPRGAPFRELTARLAEKAGAGGDAVTAVR 60
Query: 100 YQLV--AEDLDVLVSVTCDEDLTHMLDEYDRFEAKRSPSASPRFRVYVFSS 148
Y+L D D+LVSVT DE+L HM DEYDR A R PSAS FRV+V ++
Sbjct: 61 YRLADGGLDEDLLVSVTSDEELAHMRDEYDRLRATR-PSAS--FRVFVSTA 108
>Os07g0556300 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 423
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 78/115 (67%), Gaps = 7/115 (6%)
Query: 43 IKILCSFGGRIMPRPSDGALKYIGGETRVLAVPRSIPFSDLKKKVEE----MFRT--EVA 96
++++CSFGGRI+PRP D L+Y+GGETR+++VPR+ F L + + +F
Sbjct: 94 VRLMCSFGGRILPRPGDHQLRYVGGETRIVSVPRAATFDALVAALAKVAPALFPAGGPSP 153
Query: 97 AIKYQLVAEDLDVLVSVTCDEDLTHMLDEYDRFEAKRSPSAS-PRFRVYVFSSQP 150
A++YQL +DLD L+S+T D+D+ ++++E DRF+ + S PR R+++F+S P
Sbjct: 154 ALRYQLPQDDLDALISITSDDDVDNLIEEIDRFQGLAAASIKPPRLRLFLFASSP 208
>Os02g0809100 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 507
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 11/116 (9%)
Query: 42 RIKILCSFGGRIMPRPSDGALKYIGGETRVLAVPRSIPFSDLKKKVEEMFRTEVA-AIKY 100
+++++ S+GGRI PRP D L Y+ GET++L++ R + F+D ++ + + +KY
Sbjct: 40 KVRLMVSYGGRIQPRPHDHQLSYVNGETKILSLERPLRFADFAARLAGLAGSPGDFCVKY 99
Query: 101 QLVAEDLDVLVSVTCDEDLTHMLDEYDRFEAKR----------SPSASPRFRVYVF 146
QL EDLD LVSVT DEDL H++ EYDR R ++PR RV++F
Sbjct: 100 QLPGEDLDALVSVTNDEDLEHLVLEYDRLHLLRPAPGSGGGSSRGGSTPRLRVFLF 155
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.132 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,696,950
Number of extensions: 434670
Number of successful extensions: 1286
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 1277
Number of HSP's successfully gapped: 10
Length of query: 366
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 264
Effective length of database: 11,709,973
Effective search space: 3091432872
Effective search space used: 3091432872
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)