BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0350700 Os05g0350700|AK071365
(1251 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0350700 Conserved hypothetical protein 2363 0.0
Os01g0967100 Conserved hypothetical protein 311 2e-84
Os05g0107300 Conserved hypothetical protein 234 2e-61
AK122175 173 6e-43
>Os05g0350700 Conserved hypothetical protein
Length = 1251
Score = 2363 bits (6124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1160/1251 (92%), Positives = 1160/1251 (92%)
Query: 1 MASSTKSDLMSGSPDGHGYFSGQRGLYSAASLERSASFRESGDSYAAFPVSGSSRSPAVD 60
MASSTKSDLMSGSPDGHGYFSGQRGLYSAASLERSASFRESGDSYAAFPVSGSSRSPAVD
Sbjct: 1 MASSTKSDLMSGSPDGHGYFSGQRGLYSAASLERSASFRESGDSYAAFPVSGSSRSPAVD 60
Query: 61 SATLLQSLAMDLRTTTLEPKTSRLDVKKSISLILGISPEESTSTPCTGRNSSLPFEEIRR 120
SATLLQSLAMDLRTTTLEPKTSRLDVKKSISLILGISPEESTSTPCTGRNSSLPFEEIRR
Sbjct: 61 SATLLQSLAMDLRTTTLEPKTSRLDVKKSISLILGISPEESTSTPCTGRNSSLPFEEIRR 120
Query: 121 MKNNLSDISNKARERSRAYGAAVTKIERCCPNILRKRSRGDGSSNERSTALLSGGLISKM 180
MKNNLSDISNKARERSRAYGAAVTKIERCCPNILRKRSRGDGSSNERSTALLSGGLISKM
Sbjct: 121 MKNNLSDISNKARERSRAYGAAVTKIERCCPNILRKRSRGDGSSNERSTALLSGGLISKM 180
Query: 181 PPQGHLNADDTELVSPRGEERIKNAGQNRRLRTSMSEMDARTTVLSRGLGSTDRSADPGK 240
PPQGHLNADDTELVSPRGEERIKNAGQNRRLRTSMSEMDARTTVLSRGLGSTDRSADPGK
Sbjct: 181 PPQGHLNADDTELVSPRGEERIKNAGQNRRLRTSMSEMDARTTVLSRGLGSTDRSADPGK 240
Query: 241 VTGGGPAVPEEKIRGLATGIDGWEKPKMKKKRSAIKADVSMTGPSRNVDVDREQKPGMQH 300
VTGGGPAVPEEKIRGLATGIDGWEKPKMKKKRSAIKADVSMTGPSRNVDVDREQKPGMQH
Sbjct: 241 VTGGGPAVPEEKIRGLATGIDGWEKPKMKKKRSAIKADVSMTGPSRNVDVDREQKPGMQH 300
Query: 301 KFNNEARARMTNXXXXXXXXXXXXXXXXXXXXXXGQNGVGRSLSRSDQDSGFHPTNKRDR 360
KFNNEARARMTN GQNGVGRSLSRSDQDSGFHPTNKRDR
Sbjct: 301 KFNNEARARMTNSPSFRSGTVSSVSSISKSDLLSGQNGVGRSLSRSDQDSGFHPTNKRDR 360
Query: 361 QAVLDKEISAPKSHNKPSEDDGGANVTAVPKANGSTRGPRSNSGSLLKSSPNIHRLQANS 420
QAVLDKEISAPKSHNKPSEDDGGANVTAVPKANGSTRGPRSNSGSLLKSSPNIHRLQANS
Sbjct: 361 QAVLDKEISAPKSHNKPSEDDGGANVTAVPKANGSTRGPRSNSGSLLKSSPNIHRLQANS 420
Query: 421 DDWEHPSGMTKLNSTSGSGNPKRTKSTHSLSPPTQWGGQRPQKISRSARKSNLVAIITNT 480
DDWEHPSGMTKLNSTSGSGNPKRTKSTHSLSPPTQWGGQRPQKISRSARKSNLVAIITNT
Sbjct: 421 DDWEHPSGMTKLNSTSGSGNPKRTKSTHSLSPPTQWGGQRPQKISRSARKSNLVAIITNT 480
Query: 481 DGQSVSGSLESPSINEESAGLPRRASINCSQQTRRGDHGLSTGSEGDESGVAEKKLRDKS 540
DGQSVSGSLESPSINEESAGLPRRASINCSQQTRRGDHGLSTGSEGDESGVAEKKLRDKS
Sbjct: 481 DGQSVSGSLESPSINEESAGLPRRASINCSQQTRRGDHGLSTGSEGDESGVAEKKLRDKS 540
Query: 541 KRAGELDDGHSGFQKIAMLGHPSKRNKLSADDDVGDAARRQGRIGRGFTPTRPSTPASID 600
KRAGELDDGHSGFQKIAMLGHPSKRNKLSADDDVGDAARRQGRIGRGFTPTRPSTPASID
Sbjct: 541 KRAGELDDGHSGFQKIAMLGHPSKRNKLSADDDVGDAARRQGRIGRGFTPTRPSTPASID 600
Query: 601 KLENAPTTKQRSVRTVTERNESKSGRPLIKKMSERKGNARPRHISSNAQLDSPVQSEDDH 660
KLENAPTTKQRSVRTVTERNESKSGRPLIKKMSERKGNARPRHISSNAQLDSPVQSEDDH
Sbjct: 601 KLENAPTTKQRSVRTVTERNESKSGRPLIKKMSERKGNARPRHISSNAQLDSPVQSEDDH 660
Query: 661 EEXXXXXXXXXXXXXXXPFWRQVEPFFSYLTTEDIAYLSQQIHLSDDSTASRSIEGDESR 720
EE PFWRQVEPFFSYLTTEDIAYLSQQIHLSDDSTASRSIEGDESR
Sbjct: 661 EELLAAANSALRSANSSPFWRQVEPFFSYLTTEDIAYLSQQIHLSDDSTASRSIEGDESR 720
Query: 721 KYKGSLEYISQPSTPAGSNKDDHSALQNGYTLNEIDNDVGIAWETSCIEPILDQLVQGIG 780
KYKGSLEYISQPSTPAGSNKDDHSALQNGYTLNEIDNDVGIAWETSCIEPILDQLVQGIG
Sbjct: 721 KYKGSLEYISQPSTPAGSNKDDHSALQNGYTLNEIDNDVGIAWETSCIEPILDQLVQGIG 780
Query: 781 ARGGASVGQRLMQALIDEDKVDNITNNIYRSETYPFDTHEIHFEEGGWKSHSQGYKLESL 840
ARGGASVGQRLMQALIDEDKVDNITNNIYRSETYPFDTHEIHFEEGGWKSHSQGYKLESL
Sbjct: 781 ARGGASVGQRLMQALIDEDKVDNITNNIYRSETYPFDTHEIHFEEGGWKSHSQGYKLESL 840
Query: 841 MNFEAAGKGSNGLMLDSDWKYHDELSHKGNNAMEKAKVWPEFQYSEMCFSDRIIIELSEV 900
MNFEAAGKGSNGLMLDSDWKYHDELSHKGNNAMEKAKVWPEFQYSEMCFSDRIIIELSEV
Sbjct: 841 MNFEAAGKGSNGLMLDSDWKYHDELSHKGNNAMEKAKVWPEFQYSEMCFSDRIIIELSEV 900
Query: 901 GVSIEPVPDLAQSEDEDINSEICKLEGQLHKEVVDKKNLLRKLDGILRTKKESQHREFSR 960
GVSIEPVPDLAQSEDEDINSEICKLEGQLHKEVVDKKNLLRKLDGILRTKKESQHREFSR
Sbjct: 901 GVSIEPVPDLAQSEDEDINSEICKLEGQLHKEVVDKKNLLRKLDGILRTKKESQHREFSR 960
Query: 961 RAMERLLLIAYEKYMAFCGSSSSKNVNRAGKHAALSFVKRTIARCQNYEESGACCFDETP 1020
RAMERLLLIAYEKYMAFCGSSSSKNVNRAGKHAALSFVKRTIARCQNYEESGACCFDETP
Sbjct: 961 RAMERLLLIAYEKYMAFCGSSSSKNVNRAGKHAALSFVKRTIARCQNYEESGACCFDETP 1020
Query: 1021 FKDMFVSATSHRSDPDSASQDNITVPKSVQXXXXXXXXXXXXHLTDLSFSKEDPWTNNVK 1080
FKDMFVSATSHRSDPDSASQDNITVPKSVQ HLTDLSFSKEDPWTNNVK
Sbjct: 1021 FKDMFVSATSHRSDPDSASQDNITVPKSVQRASTSDASRASSHLTDLSFSKEDPWTNNVK 1080
Query: 1081 QRELLLDEVVXXXXXXXXXXXXXXXXXXXNTKGKRSEREGKGHNRDXXXXXXXXXXNAKG 1140
QRELLLDEVV NTKGKRSEREGKGHNRD NAKG
Sbjct: 1081 QRELLLDEVVGSITGGTLKTSGLGTSLVSNTKGKRSEREGKGHNRDGSRSGRPSSSNAKG 1140
Query: 1141 ERKNKTKPKQKTANISAPVSSALTRDPQSQAKITPSGNGRDNTSAASARHEEPANASNDA 1200
ERKNKTKPKQKTANISAPVSSALTRDPQSQAKITPSGNGRDNTSAASARHEEPANASNDA
Sbjct: 1141 ERKNKTKPKQKTANISAPVSSALTRDPQSQAKITPSGNGRDNTSAASARHEEPANASNDA 1200
Query: 1201 EMPDLSNLELPGMDVDFGGWLNIEXXXXXXXXXXXXXEIPMDDINEINLMI 1251
EMPDLSNLELPGMDVDFGGWLNIE EIPMDDINEINLMI
Sbjct: 1201 EMPDLSNLELPGMDVDFGGWLNIEDDDGLQDLDLMGLEIPMDDINEINLMI 1251
>Os01g0967100 Conserved hypothetical protein
Length = 1245
Score = 311 bits (798), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 305/1034 (29%), Positives = 484/1034 (46%), Gaps = 127/1034 (12%)
Query: 93 ILGIS--PEESTSTPCTGRNSSLPFEEIRRMKNNLSDISNKARERSRAYGAAVTKIERCC 150
+LG++ E+S T S+ EE++R++ + + S KA+E++++ ++ K+++
Sbjct: 61 VLGVTVEAEQSFGLVQTKPLPSIASEELKRIRGGVVESSAKAKEKTKSLQDSIQKLDKYR 120
Query: 151 PNILRKRSRGDGSSNERSTALLSGGLISKMPPQGHLNADDTELVSPRGEERIKNAGQNRR 210
+ R+R R +G + ERS+ SG L +M Q ++ L EER K+A ++R
Sbjct: 121 NVVTRRRQRSEGGATERSSGSGSGSL--RMGAQNSMDNPGQRL-----EERAKSATTSKR 173
Query: 211 LRTSMS---EMDARTTVLSRG--LGSTDRSADPGKV------TGGGPAVPEEKIRGLATG 259
+R+S++ ++ R V +R L +++S+ K E+K+RGLA G
Sbjct: 174 VRSSLAADARLEGRGNVPTRQGPLADSEKSSSLEKEKNSLRNVNAASGFSEDKLRGLAPG 233
Query: 260 IDGWEKPKMKKKRSAIKADVSMTGPSRNVDVDREQKPGMQHKFNNEARARMTNXXXXXXX 319
+GWEK K+K+KRS T +R DVDR+ KP +QH+ NNEAR R ++
Sbjct: 234 GEGWEK-KLKRKRSV------GTMLNRGNDVDRDVKPLVQHRPNNEARMRSSDGLPIRHG 286
Query: 320 XXXXXXXXXXXXXXXGQNGVG-RSLSRSDQDSGFHPTNKRDRQAVLDKEISAPKSHN-KP 377
Q+ G R L ++D DS P +R+R +DKE K +
Sbjct: 287 ASAGALGGSKMDGGSQQSNAGSRYLLKADMDSTSLPNERRERHLGIDKERVLVKGNKANT 346
Query: 378 SEDDGGANVTAVPKANGSTRGPRSNSGSLLKSSPNIHRLQANSDDWEHPSGMTKLNSTSG 437
SED + + K + R PR++S ++ SS + R D+WE K + G
Sbjct: 347 SEDMQPGTLNPLTKGK-ACRAPRTSSLVVMNSSSTLQRSSGGIDEWEETPSTNKSSPLGG 405
Query: 438 SGNPKRTKSTHSLSPPTQWGGQRPQKISRSARKSNLVAIITNTD-GQSVSGSLES---PS 493
+ N KR + SPP W GQRPQK+SR+ R++N+V+ ++N D G S L++ P+
Sbjct: 406 TANRKRPMTASGSSPPVAWVGQRPQKMSRT-RRANVVSPVSNFDEGLSEGSPLDAAVRPA 464
Query: 494 INEESAGLPRRASINCSQQTRRGDHGLSTG--SEGDESGVAEKKLRDKSKRAGELD-DGH 550
+ LPR + N SQ T R D+ S SE ++S E K +DK +G+ + +G
Sbjct: 465 VESPGLLLPRGVASNNSQVTPRMDNISSPAGLSESEDSAATENKNKDKISNSGDFENEGA 524
Query: 551 SGFQKIAMLGHPSKRNKLSADDDVGDAA-RRQGRIGRGFTPTRPSTPASIDKLENAPTTK 609
+ A L SK++++ +++ D + RRQGR GR + +KL++ T K
Sbjct: 525 NSAHNSADLIISSKKSRILLKEELEDGSIRRQGRSGRNTMHVKGCASMPREKLDSPETRK 584
Query: 610 -QRSVRTVTERNESKSGRPLIKKMSERKGNARPRHISSNAQLDSPVQSEDDHEE---XXX 665
+S R V+E+NESK GRP KK S+RK ++R I + D +SEDD EE
Sbjct: 585 LLKSGRPVSEKNESKLGRPPTKKGSDRKASSRHSEILNCGLTDISGESEDDREELLAAAN 644
Query: 666 XXXXXXXXXXXXPFWRQVEPFFSYLTTEDIAYLSQQIHLSDDSTASRSIEGDE-----SR 720
PFW+++EP +++++ED+++L QI ++ S DE S
Sbjct: 645 AARSAIVNAYAGPFWKKIEPMLTFISSEDLSFLKHQITFLEELEMGMSKSSDEHNLNTST 704
Query: 721 KYKGSLEYISQPSTPAGSN--KDDHSALQNGYTLNEID----NDVGIAWETSCIEPILDQ 774
Y G L S P ++ + S T ID ND A + + E +
Sbjct: 705 NYSGPLSMGQNSSLPQSNSCVSLEQSEANGPRTRESIDILSPNDENTASQKTHAEELFG- 763
Query: 775 LVQGIGARGGASVGQRLMQALIDEDKVDNITNN------IYRSETYPFDTH---EIHFEE 825
G AS+ +L A I ED ++ N + ++ P+ + E FE
Sbjct: 764 --------GMASLTHKLFSAFIVEDGDNSSECNGGDILLEFSNDFLPYAANMNLENDFEA 815
Query: 826 GGWKS---------HSQGYKLESLMNFEAAGKGSNGLMLDSDWK---------------- 860
KS HS + + M SNG S+ +
Sbjct: 816 SAVKSNFGSSPDFKHSNHSSVHNSM--------SNGFTASSNLRASYSPNSICSENASDA 867
Query: 861 -----------YHDELSHKGNNAMEKAKVWP----EFQYSEMCFSDRIIIELSEVGVSIE 905
+H+ + H AK P E+QY ++ DR +IEL + + E
Sbjct: 868 IKFAVYPENGGFHEFVPHISQQYQNCAKSTPLPPYEYQYDQLPVHDRALIELHSIDLCPE 927
Query: 906 PVPDLAQSEDEDINSEICKLEGQLHKEVVDKKNLLRKLDGILRTKKESQHREFSRRAMER 965
+P L EDEDI+ I +L+ +L ++V KK L KLD +R K + R + AM +
Sbjct: 928 -MPKLDDGEDEDIDKVITELQKRLFEQVNQKKCQLHKLDKAIRDTKNMEERSLEQHAMNK 986
Query: 966 LLLIAYEKYMAFCGSSS-----SKNVNRAGKHAALSFVKRTIARCQNYEESGACCFDETP 1020
L+ +AY+K M GSSS +K N+A K AL+F KRT+ARCQ +EE+ CF E P
Sbjct: 987 LVEMAYKKLMGGRGSSSHKGGLNKAANKAAKQVALAFAKRTLARCQKFEETEKSCFRE-P 1045
Query: 1021 FKDMFVSATSHRSD 1034
F +SA ++D
Sbjct: 1046 FLWNVLSAPLPKND 1059
>Os05g0107300 Conserved hypothetical protein
Length = 1210
Score = 234 bits (598), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 265/993 (26%), Positives = 454/993 (45%), Gaps = 136/993 (13%)
Query: 116 EEIRRMKNNLSDISNKARERSRAYGAAVTKIERCCPNILRKRSRGDGSSNERSTALLSGG 175
+E+RR++++++D S+KARE+ R+ AV K++RC + RKR R + ++ + A G
Sbjct: 64 QELRRIRSSVADSSSKAREKVRSMQEAVQKVDRCRNVLNRKRQRSEPAAAAAAGAEKPSG 123
Query: 176 LISKMPPQGHLNADDTELVSPRGEERIKNAGQNRRLRTSMSE--MDARTTVLSRG--LGS 231
S G N++ + ++S +R+R+S+++ ++ R+ + +R L +
Sbjct: 124 --SGALRIGAQNSNSSAVMS-------------KRVRSSLADGRLEGRSNISTRQSPLVN 168
Query: 232 TDRSA--DPGKVTGGGPAVPEEKIRGLATGIDGWEKPKMKKKRSAIKADVSMTGPSRNVD 289
++S+ + K G + E+K++GL+TG +GWEK K+K+KRS T +R D
Sbjct: 169 NEKSSLVEKEKSCGRTSGLSEDKLQGLSTGGEGWEK-KLKRKRSI------GTVLNRGND 221
Query: 290 VDREQKPGMQHKFNNEARARMTNX-XXXXXXXXXXXXXXXXXXXXXGQNGVGRSLSRSDQ 348
DR+ K G QH+ NEA R ++ + R L ++D
Sbjct: 222 ADRDVKSGGQHRPANEANPRPSDGPSHRHGASAVEYAGSRMDGSSQQNSNSSRILCKTDM 281
Query: 349 DSGFHPTNKRDRQAVLDKEISAPKSHN-KPSEDDGGANVTAVPKANGSTRGPRSNSGSLL 407
D P +R+R ++KE K + + SED +++ +PKA + R PR+ S +
Sbjct: 282 DHATLPNERRERYVGIEKERGMVKGNRAQASEDMQTGSISPLPKAK-ACRAPRTGSHGM- 339
Query: 408 KSSPNIHRLQANSDDWEHPSGMTKLNSTSGSGNPKRTKSTHSLSPPTQWGGQRPQKISRS 467
S+ + R SD+WE K + G N KR+ +++ SPP W GQRPQK+SR+
Sbjct: 340 GSASSFQRSTGGSDEWEEIPYSNKASLLGGMTNRKRSIHSNASSPPIAWVGQRPQKMSRT 399
Query: 468 ARKSNLVAIITNTD-----GQSVSGSLESPSINEESAGL---PRRASINCSQQTRRGDHG 519
R++N+V+ ++N D G + ++ + + ES G+ + S N D
Sbjct: 400 -RRANVVSPVSNFDEVLSEGSPLDTAIAAKPTSTESCGVVLTKKGTSSNTQMANTMNDIP 458
Query: 520 LSTG-SEGDESGVAEKKLRDKSKRAGELDDGHSGF-QKIAMLGHPSKRNKLSADDDVGD- 576
G SE + S V E+K+++K+ GE+++ + + A S +N + +++ D
Sbjct: 459 SPVGLSESEGSAVKERKVKEKATNNGEVENEAANLVRNSAGSIVSSNKNTIPLKEELQDG 518
Query: 577 AARRQGRIGRGFTPTRPSTPASI--DKLENAPTTK-QRSVRTVTERNESKSGRPLIKKMS 633
RRQGR GRG + + +SI +KL+ A T K + R +E+NESK GRP +KK S
Sbjct: 519 GVRRQGRSGRGTMHVKEYSSSSISKEKLDAAETRKPNKGGRPGSEKNESKVGRPTMKKGS 578
Query: 634 ERKG-NARPRHISSNAQLDSPVQSEDDHEEXXXXXXXXXXXXXXX---PFWRQVEPFFSY 689
++ + P+ ++ + DD EE PFW+++EP ++
Sbjct: 579 DQNNLSCFPQALN--------CEHTDDREELLAAVNAARGAIVGAYCGPFWKKMEPMLTF 630
Query: 690 LTTEDIAYLSQQIHLSDDSTASRSIEGDESRKYKGSLEYISQPSTPAGSNKDDHSALQ-- 747
+++E++++L +QI + ++ S D EY+ P+ + + S +
Sbjct: 631 ISSENLSFLKKQIDIVEELDLGMSCVPDG--------EYVLAPTNYSRQQTTEFSCQELV 682
Query: 748 --NGYTLNEID--NDVGIAWETSCIEPILD---QLVQGIGA----RGGASVGQRLMQALI 796
N L E N VG+ C P + + Q I A + RL+ A++
Sbjct: 683 PSNSSILPEQSETNGVGLKGTIDCFSPSEENQHHVPQKIEADKWFHEMVPMEHRLLSAIV 742
Query: 797 DEDKVDNITNNIYRSETYPFDTHEIHFEEGGWKSHSQGYKLESLMNFEAAGKGSNGLMLD 856
E+ + N + R + F + S G +L++ G + + +
Sbjct: 743 MEEDISE-PNVVQRDILFEFSNSHVPCA----ASRFLGNELQASAISSNFGLSVDFMNSN 797
Query: 857 SDWKYHDELS------------------HKGNNAMEKAKVWPE----------------- 881
+ H LS H N + E V+PE
Sbjct: 798 NSSVVHQSLSNGFTSSSSFISSSSQSSVHNDNLSDEVNFVYPENGPFDNLIPQTSSLRQK 857
Query: 882 -----------FQYSEMCFSDRIIIELSEVGVSIEPVPDLAQSEDEDINSEICKLEGQLH 930
+QY +M +D+I IEL +G+ E VP L ED +IN I +L +LH
Sbjct: 858 PGKNFSSSPHEYQYGQMSVNDKIFIELQSIGIFPEAVPKLDDGEDNNINKMISELRKRLH 917
Query: 931 KEVVDKKNLLRKLDGILRTKKESQHREFSRRAMERLLLIAYEKYM-AFCGSS----SSKN 985
+V KK L KL+ ++ K + R + AM +L+ AY K GSS +SK+
Sbjct: 918 DQVKQKKCKLSKLEKAIQDTKSIEERSLEQHAMNKLVERAYRKLKGGRTGSSHKAGASKS 977
Query: 986 VNRAGKHAALSFVKRTIARCQNYEESGACCFDE 1018
++A K AL F KRT+ RCQ +EE+ CF E
Sbjct: 978 ASKAAKQLALDFAKRTLLRCQKFEETKKSCFSE 1010
>AK122175
Length = 947
Score = 173 bits (439), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 166/574 (28%), Positives = 259/574 (45%), Gaps = 74/574 (12%)
Query: 524 SEGDESGVAEKKLRDKSKRAGELD-DGHSGFQKIAMLGHPSKRNKLSADDDVGDAA-RRQ 581
SE ++S E K +DK +G+ + +G + A L SK++++ +++ D + RRQ
Sbjct: 199 SESEDSAATENKNKDKISNSGDFENEGANSAHNSADLIISSKKSRILLKEELEDGSIRRQ 258
Query: 582 GRIGRGFTPTRPSTPASIDKLENAPTTKQ-RSVRTVTERNESKSGRPLIKKMSERKGNAR 640
GR GR + +KL++ T K +S R V+E+NESK GRP KK S+RK ++R
Sbjct: 259 GRSGRNTMHVKGCASMPREKLDSPETRKLLKSGRPVSEKNESKLGRPPTKKGSDRKASSR 318
Query: 641 PRHISSNAQLDSPVQSEDDHEE---XXXXXXXXXXXXXXXPFWRQVEPFFSYLTTEDIAY 697
I + D +SEDD EE PFW+++EP +++++ED+++
Sbjct: 319 HSEILNCGLTDISGESEDDREELLAAANAARSAIVNAYAGPFWKKIEPMLTFISSEDLSF 378
Query: 698 LSQQIHLSDDSTASRSIEGDE-----SRKYKGSLEYISQPSTPAGSN--KDDHSALQNGY 750
L QI ++ S DE S Y G L S P ++ + S
Sbjct: 379 LKHQITFLEELEMGMSKSSDEHNLNTSTNYSGPLSMGQNSSLPQSNSCVSLEQSEANGPR 438
Query: 751 TLNEID----NDVGIAWETSCIEPILDQLVQGIGARGGASVGQRLMQALIDEDKVDNITN 806
T ID ND A + + E + G AS+ +L A I ED ++
Sbjct: 439 TRESIDILSPNDENTASQKTHAEELFG---------GMASLTHKLFSAFIVEDGDNSSEC 489
Query: 807 N------IYRSETYPFDTH---EIHFEEGGWKSH-------------------SQGYKLE 838
N + ++ P+ + E FE KS+ S G+
Sbjct: 490 NGGDILLEFSNDFLPYAANMNLENDFEASAVKSNFGSSPDFKHSNHSSVHNSMSNGFTAS 549
Query: 839 SLMNF---------EAAGKGSNGLMLDSDWKYHDELSHKGNNAMEKAKVWP----EFQYS 885
S + E A + + +H+ + H AK P E+QY
Sbjct: 550 SNLRASYSPNSICSENASDAIKFAVYPENGGFHEFVPHISQQYQNCAKSTPLPPYEYQYD 609
Query: 886 EMCFSDRIIIELSEVGVSIEPVPDLAQSEDEDINSEICKLEGQLHKEVVDKKNLLRKLDG 945
++ DR +IEL + + E +P L EDEDI+ I +L+ +L ++V KK L KLD
Sbjct: 610 QLPVHDRALIELHSIDLCPE-MPKLDDGEDEDIDKVITELQKRLFEQVNQKKCQLHKLDK 668
Query: 946 ILRTKKESQHREFSRRAMERLLLIAYEKYMAFCGSSS-----SKNVNRAGKHAALSFVKR 1000
+R K + R + AM +L+ +AY+K M GSSS +K N+A K AL+F KR
Sbjct: 669 AIRDTKNMEERSLEQHAMNKLVEMAYKKLMGGRGSSSHKGGLNKAANKAAKQVALAFAKR 728
Query: 1001 TIARCQNYEESGACCFDETPFKDMFVSATSHRSD 1034
T+ARCQ +EE+ CF E PF +SA ++D
Sbjct: 729 TLARCQKFEETEKSCFRE-PFLWNVLSAPLPKND 761
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.309 0.127 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 41,882,693
Number of extensions: 1839957
Number of successful extensions: 4900
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 4872
Number of HSP's successfully gapped: 7
Length of query: 1251
Length of database: 17,035,801
Length adjustment: 112
Effective length of query: 1139
Effective length of database: 11,187,833
Effective search space: 12742941787
Effective search space used: 12742941787
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 162 (67.0 bits)