Os05g0107300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0107300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.21 | 0.183 | 11.4 | 0.0231 | 0.0835 | -0.921 | 0.106 | -0.851 | 0.2 | 0.689 | 24.25 | 1337 | -- | -- |
| 15.84 | 0.185 | 11.4 | -0.102 | 0.0568 | -0.797 | 0.166 | -- | 0.169 | 0.299 | 24.9 | 1181 | -- | -- |
| 15.25 | 0.182 | 11.4 | 0.021 | 0.0767 | -0.92 | -- | -0.85 | 0.198 | 0.43 | 24.25 | 1298 | -- | -- |
| 15.95 | 0.186 | 11.4 | -0.113 | 0.0582 | -0.801 | -- | -- | 0.168 | 0.672 | 24.9 | 1204 | -- | -- |
| 15.43 | 0.183 | 11.4 | 0.0248 | -- | -0.896 | -- | -0.772 | 0.202 | -- | 24.6 | 1136 | -- | -- |
| 24.69 | 0.233 | 11.4 | 0.128 | 0.122 | -- | 0.153 | -- | 0.335 | 1.18 | -- | -- | -- | -- |
| 24.79 | 0.233 | 11.4 | 0.123 | 0.121 | -- | -- | -- | 0.335 | 1.09 | -- | -- | -- | -- |
| 16.07 | 0.187 | 11.4 | -0.114 | -- | -0.805 | -- | -- | 0.166 | -- | 25 | 1105 | -- | -- |
| 16.24 | 0.188 | 11.4 | -- | 0.0531 | -0.741 | -- | -- | 0.191 | 1.03 | 24.91 | 1152 | -- | -- |
| 25.71 | 0.237 | 11.3 | 0.127 | -- | -- | -- | -- | 0.337 | -- | -- | -- | -- | -- |
| 25.19 | 0.235 | 11.4 | -- | 0.124 | -- | -- | -- | 0.321 | 1.13 | -- | -- | -- | -- |
| 16.36 | 0.188 | 11.4 | -- | -- | -0.753 | -- | -- | 0.187 | -- | 25.1 | 1099 | -- | -- |
| 26.13 | 0.239 | 11.4 | -- | -- | -- | -- | -- | 0.323 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 13 |
| 18 | 14.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 20 | 14.73 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 21 | 14.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 9 |
| 36 | 14.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 42 | 14.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 45 | 14.76 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 69 | 14.79 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 75 | 14.80 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 433 | 15.34 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 449 | 15.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 23 |
| 462 | 15.38 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 484 | 15.41 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 513 | 15.45 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 525 | 15.47 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 538 | 15.49 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 582 | 15.54 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 588 | 15.55 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 613 | 15.59 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 654 | 15.64 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 659 | 15.65 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 714 | 15.73 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 734 | 15.75 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 761 | 15.78 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 11 |
| 770 | 15.79 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 847 | 15.84 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 889 | 15.87 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 949 | 15.90 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |