Os05g0350700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0350700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.74 | 0.224 | 10.3 | 0.49 | 0.214 | 0.323 | -0.696 | -0.0987 | 0.276 | 4.86 | 79.4 | 316 | -- | -- |
| 22.75 | 0.222 | 10.3 | 0.482 | 0.217 | 0.324 | -0.75 | -- | 0.277 | 4.76 | 79.47 | 338 | -- | -- |
| 23.59 | 0.226 | 10.3 | 0.499 | 0.232 | 0.304 | -- | -0.436 | 0.275 | 5.01 | 79.61 | 311 | -- | -- |
| 24.21 | 0.229 | 10.3 | 0.49 | 0.23 | 0.303 | -- | -- | 0.277 | 4.84 | 79.11 | 353 | -- | -- |
| 24.52 | 0.231 | 10.3 | 0.52 | -- | 0.482 | -- | -0.516 | 0.294 | -- | 74.27 | 315 | -- | -- |
| 25.03 | 0.235 | 10.3 | 0.523 | 0.433 | -- | -0.673 | -- | 0.239 | 5.04 | -- | -- | -- | -- |
| 26.18 | 0.24 | 10.3 | 0.524 | 0.429 | -- | -- | -- | 0.242 | 5.09 | -- | -- | -- | -- |
| 25.23 | 0.234 | 10.3 | 0.493 | -- | 0.469 | -- | -- | 0.291 | -- | 74.57 | 316 | -- | -- |
| 30.32 | 0.256 | 10.3 | -- | 0.213 | 0.381 | -- | -- | 0.241 | 4.33 | 82 | 374 | -- | -- |
| 35.84 | 0.28 | 10.3 | 0.539 | -- | -- | -- | -- | 0.253 | -- | -- | -- | -- | -- |
| 33.42 | 0.27 | 10.3 | -- | 0.438 | -- | -- | -- | 0.184 | 5.05 | -- | -- | -- | -- |
| 31.33 | 0.261 | 10.3 | -- | -- | 0.506 | -- | -- | 0.25 | -- | 79 | 316 | -- | -- |
| 43.52 | 0.308 | 10.3 | -- | -- | -- | -- | -- | 0.193 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.59 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 4 | 20.86 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 5 | 20.89 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 9 | 20.94 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 10 | 20.94 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 12 | 20.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 13 | 20.97 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 14 | 20.97 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 15 | 20.98 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 16 | 21.00 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 7 |
| 21 | 21.06 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 23 | 21.06 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 25 | 21.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 27 | 21.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 30 | 21.10 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 31 | 21.10 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 34 | 21.10 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 48 | 21.16 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 69 | 21.26 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 8 |
| 70 | 21.27 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 72 | 21.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 9 |
| 73 | 21.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 9 |
| 76 | 21.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 9 |
| 91 | 21.31 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 94 | 21.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 11 |
| 105 | 21.33 | wind | 1.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 120 | 21.35 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 125 | 21.36 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 135 | 21.36 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 145 | 21.38 | wind | 1.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 154 | 21.38 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 156 | 21.38 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 10 |
| 168 | 21.39 | wind | 1.0 | 43200 | < th | dose dependent | sin | 16 | NA |
| 174 | 21.40 | wind | 1.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 195 | 21.42 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 19 | 14 |
| 201 | 21.43 | wind | 1.0 | 43200 | < th | dose independent | rect. | 11 | 17 |
| 210 | 21.44 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 12 |
| 231 | 21.46 | wind | 3.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 236 | 21.46 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 14 |
| 266 | 21.49 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 272 | 21.49 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 11 |
| 336 | 21.55 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 373 | 21.57 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 18 |
| 394 | 21.59 | wind | 1.0 | 43200 | > th | dose independent | rect. | 11 | 17 |
| 403 | 21.60 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 410 | 21.60 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 18 |
| 413 | 21.60 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 436 | 21.62 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 444 | 21.62 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 455 | 21.63 | wind | 1.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 457 | 21.63 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 20 |
| 458 | 21.63 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 22 | NA |
| 471 | 21.64 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 7 |
| 495 | 21.66 | wind | 3.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 510 | 21.67 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 18 |
| 519 | 21.68 | wind | 3.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 583 | 21.72 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 604 | 21.73 | wind | 3.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 606 | 21.73 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 644 | 21.74 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 14 |
| 656 | 21.75 | wind | 3.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 690 | 21.76 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 22 |
| 716 | 21.77 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 22 |
| 725 | 21.77 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 756 | 21.79 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 784 | 21.79 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 12 | 22 |
| 791 | 21.80 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 19 |
| 805 | 21.80 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 21 |
| 841 | 21.82 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 866 | 21.83 | wind | 3.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 867 | 21.83 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 22 | NA |
| 871 | 21.83 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 11 |
| 900 | 21.84 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 22 | NA |
| 922 | 21.84 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 22 | NA |
| 934 | 21.85 | wind | 1.0 | 43200 | < th | dose independent | sin | 8 | NA |