BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0350700 Os05g0350700|AK071365
(1251 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G29790.1 | chr4:14584228-14590123 FORWARD LENGTH=1212 424 e-118
AT2G19390.1 | chr2:8390136-8396477 REVERSE LENGTH=1212 421 e-117
AT5G22450.1 | chr5:7437145-7442856 REVERSE LENGTH=1155 100 5e-21
>AT4G29790.1 | chr4:14584228-14590123 FORWARD LENGTH=1212
Length = 1211
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 397/1325 (29%), Positives = 613/1325 (46%), Gaps = 188/1325 (14%)
Query: 1 MASSTKSDLMSGSPDGHGYFSGQRGLYS---AASLERSASFRESGDSYAAFPVSGS---- 53
M++ K D SG P +R LY AA +ERS+SFRE+ + PVS S
Sbjct: 1 MSAPGKFDYSSGGP--------ERPLYRSNLAAQMERSSSFRETME----HPVSSSHPSM 48
Query: 54 --SRSPA--VDSATLLQSLAMDLRTTTLEPKTSRL-DVKKSISLILGISPEESTSTPCTG 108
S SP D Q L D + + K+ R D K+ +++ LGI +ES STP G
Sbjct: 49 LRSTSPIAQTDVTNFFQCLRFDPKVVAADHKSIRQGDFKRHVNIALGIQGDESPSTPLKG 108
Query: 109 RNSSLPF-EEIRRMKNNLSDISNKARERSRAYGAAVTKIERCCPNI-LRKRSRGDGSSNE 166
+ P EEI+R+K L + + KARER + + A + + P++ +KRSR +G SN+
Sbjct: 109 KLIPSPIPEEIKRLKAGLRENNVKARERLKIFNEASSVFNKFFPSVPTKKRSRPEGFSND 168
Query: 167 RSTALLSGGL-ISKMPPQGHLNADDTELVSPRGEERIKNAGQNRRLRTSMSEMDARTTVL 225
RS L+ G + KM QG EL + +ER K+ N+R RTSM MD R+ +
Sbjct: 169 RSGDRLALGPGMGKMGIQGQTLPGCFELDQQKLDERPKSGALNKRTRTSM--MDVRSNAI 226
Query: 226 SRGLGSTDRSADPGKVTGGGPAVPEEKIRGLATGIDGWEKPKMKKKRSAIKADVSMTGPS 285
R DR D ++ E++ + GIDGWEK KMKKKRS IK D GPS
Sbjct: 227 VRQSAGVDRDKDTMRLANHNAVQGEDRS---SIGIDGWEKSKMKKKRSGIKTD----GPS 279
Query: 286 -----RNVDVDREQKPGMQHKFNNEARARMTNXXXXXXXXXXXXXXXXXXXXXXGQNG-- 338
+ VD R+ K G+ K ++R+R+ Q
Sbjct: 280 SLASNKAVDGYRDLKQGIP-KLAVDSRSRLNGDSNMLRHGAVNGAVPYGRSDSLSQQTGL 338
Query: 339 VGRSLSRSDQDSGFHPTNKRDRQAVLDKEISAPKSHNKPSEDD--GGANVTAVPKANGST 396
RSL D D KR+R DKE ++ NK + D ++ T+ K + S
Sbjct: 339 AARSLLSRDSDHNPLYNEKRERATGSDKERVNLRAVNKSNIHDESNSSSPTSNLKISASV 398
Query: 397 RGPRSNSGSLLKSSPNIHRLQANSDDWEHPSGMTKLNSTSGSGNPKRTKSTHSLSPP-TQ 455
RGPRS SG K SP +H + SD W+ K SG N KR S S SPP TQ
Sbjct: 399 RGPRSGSGLPPKLSPVVHNTPSPSD-WDIAGCTNKPPLLSGVPNRKRMTSNRSSSPPVTQ 457
Query: 456 WGGQRPQKISRSARKSNLVAIITNTDGQSVSGSLESPSINEESAGLPRRASINCSQQTRR 515
W QRPQKISR AR++NLV I+++ D S ++ +E S G RR+ Q +
Sbjct: 458 WASQRPQKISRVARRTNLVPIVSSNDDIPSSDNMSDVGCSETSFGFYRRSPAASPQMKMK 517
Query: 516 GDHGLSTG--SEGDESGVAEKKLRDKSKRAGELDDGHS-GFQKIAMLGHPSKRNKLSADD 572
G++ LST S +E E K +DK K++ E++ S K+++ G S++NKL++ +
Sbjct: 518 GENSLSTTALSGSEEFSPPEIKSKDKGKQSDEVNGKTSQNVPKVSIPGLQSRKNKLASGE 577
Query: 573 DVGDAARRQGRIGRGFTPTRPSTPASIDKLENAPTTKQRSVRTVTERNESKSGRPLIKKM 632
++GD RRQGR GRGF TR P + +++ + RS R +++NES++GRP +K+
Sbjct: 578 ELGDGVRRQGRTGRGFASTRSVNPMGV--MKHGTAKQLRSARNGSDKNESRAGRPPTRKL 635
Query: 633 SERKGNARPRHISSNAQ-LDSPVQSEDDHEEXXXXXXXXXXXXXXXP--FWRQVEPFFSY 689
S+RK R ++ ++NA LD +D HEE P FW+Q+E +F +
Sbjct: 636 SDRKAYKRQKNTATNATTLDF---LDDGHEELLAAVNSAINFAQNFPSSFWKQMERYFCF 692
Query: 690 LTTEDIAYLSQQIHLSDDSTASRSIEGDESRKYKGSLEYISQPSTPAGSNKDDHSALQNG 749
++ I ++ QQ G L ++ +TP G++ D
Sbjct: 693 ISDAHINFMKQQ----------------------GELSFMG--TTPGGTSSD-------- 720
Query: 750 YTLNEIDNDVGIAWETSCIEPILDQLVQGIGARGGASVGQRLMQALIDEDKVDNITNNIY 809
+++ I P ++L A + QRL+ ALI ED
Sbjct: 721 -------------FDSHEIFP--EELASSKVDSKAAPLYQRLLSALISEDSASV------ 759
Query: 810 RSETYPFDTHEIHFEEGGWKSHSQGYKLESLMNFEAAGKGSNGLMLDSDWKYHDELS--- 866
++ F+ G S+ L +M F G S+ L D + D++S
Sbjct: 760 --------NEDLQFDGFGADVESEFSVLNHMMEFN--GYRSDRLEFD---ELEDDVSVIP 806
Query: 867 --------HKGNNAMEK--AKVWPEFQYSEMCFSDRIIIELSEVGVSIEPVPDLAQSEDE 916
H N + + + + QY + ++I +E +G+ ++P+P ++ EDE
Sbjct: 807 LKGVNSSAHHVNGRLSDHLSIDFSDIQYETLGIDEKIYMEAQSIGICLDPMPSISNVEDE 866
Query: 917 DINSEICKLEGQLHKEVVDKKNLLRKLDGILRTKKESQHREFSRRAMERLLLIAYEKYMA 976
I +I LE + + V KK++L +L KE Q +EF R E+L+ +AYEK A
Sbjct: 867 GIVDDIKTLEEAICEVVSKKKDMLNRLLKPALEMKERQEKEFERLGYEKLIEMAYEKSKA 926
Query: 977 ---FCGSSSSKNVNRAGKHAALSFVKRTIARCQNYEESGACCFDETPFKDMFVSATSHRS 1033
+S + + K AA +FVKRT+ RC+ +EE+G CF E+ FK++ ++ +
Sbjct: 927 SRRHHSASGKSSATKISKQAAFAFVKRTLERCRQFEETGKSCFSESTFKNIIIAGLTQFE 986
Query: 1034 DPDSASQDNITV-------PKSVQXXXXXXXXXXXXHLTDLSFSK---EDPWTNNVKQRE 1083
D + +D ++ P S + ++ + + E W+N +K+RE
Sbjct: 987 DNPTDKEDILSASTLMGSQPSSSLALPMTQSTENHANSSENALREGRDEMMWSNRMKKRE 1046
Query: 1084 LLLDEVVXXXXXXXXXXXXXXXXXXXNTKGKRSE--REGKGHNRDXXXXXXX-----XXX 1136
LLLD+V +TKGKRSE R+GKG
Sbjct: 1047 LLLDDV-------------GGKPLSSSTKGKRSERDRDGKGQASSSRGGSTNKIGRPALV 1093
Query: 1137 NAKGERKNKTKPKQKTANISAPVSSALTRDPQSQAKITPSGNGRDNTSAASARHEEPANA 1196
NAKGERK+KTKP+QKT + + S+ + Q++ ++ + N ++ + +E
Sbjct: 1094 NAKGERKSKTKPRQKTTPMFSSSSTCVNIVEQTRTSLSKTTNSNNSEYSNLETLDE---- 1149
Query: 1197 SNDAEMPDLSNLELP----GMD------VDFGGWLNIEXXXXXXXXXXXXXEIPMDDINE 1246
+E DLS+L++P G D D WLNI+ +IPMDD+++
Sbjct: 1150 ---SEPLDLSHLQIPDGLGGPDDFDTQAGDLSSWLNIDDDALPDTDDLLGLQIPMDDLSD 1206
Query: 1247 INLMI 1251
+N+M+
Sbjct: 1207 LNMMV 1211
>AT2G19390.1 | chr2:8390136-8396477 REVERSE LENGTH=1212
Length = 1211
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 403/1312 (30%), Positives = 592/1312 (45%), Gaps = 176/1312 (13%)
Query: 13 SPDGHGYFSG--QRGLYS---AASLERSASFRESGDS-YAAFPVSGSSRSPA--VDSATL 64
+P Y SG R LY AA +ERS+SFRES + + P+ + SP D
Sbjct: 3 APGKFDYSSGGLDRPLYRSNFAAQMERSSSFRESMEHPVPSHPIMLRTTSPIAQTDVTNF 62
Query: 65 LQSLAMDLRTTTLEPKTSRL-DVKKSISLILGISPEESTSTPCTGRNSSLPF-EEIRRMK 122
Q L D + + K+ R D K+ +S+ LGI +ES S G+ P EEI+R K
Sbjct: 63 FQCLRFDPKVVAADHKSIRQGDFKRHVSIALGILGDESPSGSLKGKFIPSPIPEEIKRFK 122
Query: 123 NNLSDISNKARERSRAYGAAVTKIERCCPNI-LRKRSRGDGSSNERS-TALLSGGLISKM 180
L + + KARER + + A + + P++ +KRSR +G S +RS L+SG + KM
Sbjct: 123 AGLRENNVKARERVKIFNEASSVFNKFFPSVPTKKRSRPEGFSGDRSGDRLVSGPGLGKM 182
Query: 181 PPQGHLNADDTELVSPRGEERIKNAGQNRRLRTSMSEMDARTTVLSRGLGSTDRSADPGK 240
QG A EL + +ER K+ N+R RTSM MD R + R + D+ + +
Sbjct: 183 GIQGQTLAGGFELDQQKLDERPKSGVPNKRTRTSM--MDVRNNCIVRQSAAVDKDKEIMR 240
Query: 241 VTGGGPAVPEEKIRGLATGIDGWEKPKMKKKRSAIKADVSMTGPS-RNVDVDREQKPGMQ 299
V E++ +TGIDGWE KMKKKRS+I AD S + VD R+ K G+Q
Sbjct: 241 VGNHNAVQGEDRT---STGIDGWETSKMKKKRSSINADCHPNLASNKVVDGYRDLKQGIQ 297
Query: 300 HKFNNEARARMTNXXXXXXXXXXXXXXXXXXXXXXGQNGVGRS--------------LSR 345
K ++R+R+ G G GRS L+R
Sbjct: 298 QKPTGDSRSRVNGDSNMFRQSAGN-----------GATGYGRSDSLSHQTSLAGHSPLAR 346
Query: 346 SDQDSGFHPTNKRDRQAVLDKEISAPKSHNKPSEDD--GGANVTAVPKANGSTRGPRSNS 403
D D + KR+R V DKE + NK + D +++ + K N S RGPRS S
Sbjct: 347 VDSDHNSLYSEKRERSIVSDKERVNLRGVNKSNIHDEFNSSSLVSNTKTNASVRGPRSGS 406
Query: 404 GSLLKSSPNIHRLQANSDDWEHPSGMTKLNSTSGSGNPKRTKSTHSLSPP-TQWGGQRPQ 462
G K SP +H + +W+ K + SG KR S S SPP TQW QRPQ
Sbjct: 407 GLPPKLSPGLHNTPS-PIEWDISGCTNKPPTLSGVTQRKRMTSNRSSSPPVTQWASQRPQ 465
Query: 463 KISRSARKSNLVAIITNTDGQSVSGSLESPSINEESAGLPRRASINCSQQTRRGDHGLST 522
KISR AR++NLV I+++ D S ++ +E G +R+ Q +G+ ST
Sbjct: 466 KISRIARRTNLVPIVSSQDEVPYSDNISDVGCSETGFGFHKRSPAASPQLKLKGESSFST 525
Query: 523 G--SEGDESGVAEKKLRDKSKRAGELDDGHSGFQKIAMLGHPS----KRNKLSADDDVGD 576
SE +ESG E K +DK K++ E+D + Q I + P+ K NK +A +++GD
Sbjct: 526 AALSESEESGHPEIKSKDKGKQSDEVDGKAA--QNIPRVSIPALQSRKSNKPAAGEEIGD 583
Query: 577 AARRQGRIGRGFTPTRPSTPASIDKLENAPTTKQ-RSVRTVTERNESKSGRPLIKKMSER 635
RRQGR GRGF+ TR P ++KL+N T K RS R + ++NESK GRP +K+S+R
Sbjct: 584 GVRRQGRTGRGFSSTRSLNPNGVNKLKNVGTAKHLRSARPIFDKNESKVGRPPTRKLSDR 643
Query: 636 KGNARPRHISSNA-QLDSPVQSEDDHEEXXXXXXXXXXXXXXXP--FWRQVEPFFSYLTT 692
K R R ++NA LD V S D EE P FW+Q+E +F Y++
Sbjct: 644 KAYKRQRATATNAPTLDFHVGSNDGREELLAAVNSAINIAQNFPNSFWKQMERYFGYISD 703
Query: 693 EDIAYLSQQIHLSDDSTASRSIEGDESRKYKGSLEYISQPSTPAGSNKDDHSALQNGYTL 752
+ I +L QQ LS S TP ++ + S +
Sbjct: 704 DHINFLKQQGELS------------------------SMGPTPVLTSSEFDSPV------ 733
Query: 753 NEIDNDVGIAWETSCIEPILDQLVQGIGARGGASVGQRLMQALIDEDKVDNITNNIYRSE 812
++ + S P+ +L+ + + V + L Q +D+D ++ NN+
Sbjct: 734 --FPEELATSRADSKASPLYQRLLSALISEDSMGVNEDL-QVDLDDDSEFSVLNNM---- 786
Query: 813 TYPFDTHEIHFEEGGWKSHSQGYKLESLMNFEAAGKGSNGLMLDSDWKYHDELSHKGNNA 872
E G++++ E L E+ GS L D H H
Sbjct: 787 -----------EFNGFRNN------ERLELDESENDGSAILFKGVDKSAH----HCNGKF 825
Query: 873 MEKAKV-WPEFQYSEMCFSDRIIIELSEVGVSIEPVPDLAQSEDEDINSEICKLEGQLHK 931
+ + + + + QY ++ ++I +E +G+SI+ +P ++ EDE I EI KLE +
Sbjct: 826 PDNSPIDFVDIQYDKLGIDEKIYLEAQSLGISIDLMPSISNVEDEGIADEIKKLEEAICN 885
Query: 932 EVVDKKNLLRKLDGILRTKKESQHREFSRRAMERLLLIAYEKYMA---FCGSSSSKNVNR 988
E KK ++ +L KE Q +E + E+L+ +AYEK A + + N+
Sbjct: 886 EGSKKKEIVDRLLKPAIEMKELQEKELDQLGYEKLIEMAYEKSKASRRHHNAGGKNSNNK 945
Query: 989 AGKHAALSFVKRTIARCQNYEESGACCFDETPFKDMFVS--ATSHRSDPDSASQDNITVP 1046
K AAL+FV+RT+ RC +E++G CF E KDMF++ AT+ + D + + P
Sbjct: 946 ISKQAALAFVRRTLERCHQFEKTGKSCFSEPEIKDMFIAGLATAEDTLMDKEYNTSTSTP 1005
Query: 1047 KSVQXXXXXXXXXXXXH--------------LTDLSFSKED-PWTNNVKQRELLLDEVVX 1091
Q L + + KED W+N VK+RELLLD+V
Sbjct: 1006 MGSQPSSSLALIGQNSENYAKSSDVLPSENALLEQTTGKEDTAWSNRVKKRELLLDDV-- 1063
Query: 1092 XXXXXXXXXXXXXXXXXXNTKGKRS--EREGKGHNRDXXXXXXX---XXXNAKGERKNKT 1146
NTKGKRS +R+GKG NAKGERK K
Sbjct: 1064 ----------GIGTQLSSNTKGKRSDRDRDGKGQASSRGGTNKIGRPSLSNAKGERKTKA 1113
Query: 1147 KPKQKTANISAPVSSALTRDPQSQAKITPSGNGRDNTSAASARHEEPANASNDAEMPDLS 1206
KPKQKT IS V R P+ P N A++ + + DLS
Sbjct: 1114 KPKQKTTQISPSV-----RVPEQPKPSLPKPN------EANSEYNNLEALEETEPILDLS 1162
Query: 1207 NLELPGMDVDF-------GGWLNIEXXXXXXXXXXXXXEIPMDDINEINLMI 1251
L++P DF W N++ IP DDI+E+N+ +
Sbjct: 1163 QLQIPDGLGDFDAQPGDINSWFNMDDEEDFDMTELG---IPTDDISELNIKL 1211
>AT5G22450.1 | chr5:7437145-7442856 REVERSE LENGTH=1155
Length = 1154
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 150/626 (23%), Positives = 272/626 (43%), Gaps = 107/626 (17%)
Query: 116 EEIRRMKNNLSDISNKARERSRAYGAAVTKIERCCPNI-LRKRSRGDGSSNERSTALLSG 174
EE++ K ++ D S +A + + + K+++ I +KR R D ER A
Sbjct: 75 EELKHFKESVLDTSREAGDLVKKLSENIFKLDKYAETINSKKRRRNDIPPGERMDAATFD 134
Query: 175 GLISKMPPQGHLNADDTELVSPRGEERIKNAGQNRRLRTSMSEM--DARTTVLSRGLGST 232
+ +++P ++++ R EER K G N+R RT+++++ DAR + L+R
Sbjct: 135 KVRNQVPRT-------QDIMAQRSEERKKMLGLNKRARTTVADVRGDARISALARQHVIE 187
Query: 233 DRSADPGKVTGGGPAVPEEKIRGLATGIDGWEKPKMKKKRSAIKADVSMTGPSRNVDVDR 292
S P V+G + EEKIR L G +GWE +MK+KRS + P + V
Sbjct: 188 KGSDSPPSVSGESVRI-EEKIRRLPVGGEGWET-RMKRKRSVATLGNRIMNPEQRV---- 241
Query: 293 EQKPGMQHKFNNEARARMTNXXXXXXXXXXXXXXXXXXXXXXGQNGVGRSLSRSDQDSGF 352
MQ K +++ R + G +G+ R D+ F
Sbjct: 242 -----MQPKPTADSKLRSCDSQNFRSKSSP------------GVSGINR------LDTSF 278
Query: 353 HPTN----------------KRDRQAVLDKEISAPKSHNKPSEDDGGANVTAVPKANGST 396
P + RDR + ++ ++ + +D + TA+ K S
Sbjct: 279 EPDSPCMGALSRNELETVSIARDRSVLAEQRLAKGNNKRNLLDDSPTNSSTAILKGKVS- 337
Query: 397 RGPRSNSGSLLKSSPNIHRLQANSDDWEHPSGMTKLNSTSGSGNPKRTKSTHSLSPPTQW 456
R PR+ + ++SS + + PSG+ + GS S H+++ QW
Sbjct: 338 RAPRTAAIMGVESSAKV----------DSPSGVLQ-----GS-------SAHAMA---QW 372
Query: 457 GGQRPQKISRSARKSNLVAIITNTD----GQSVSGSLESPSINEESAG---LPRRASINC 509
GQRP K SR+ R + + +I +++ GQ + S SP + + G + + +
Sbjct: 373 VGQRPHKNSRTRRTNVVSPVIKHSESKISGQGFATSDFSPRASPGTTGPLSVVDSSPLKM 432
Query: 510 SQQTRRGD--HGLSTGSEGDESGVAEKKLRDKSKRAGELDDGHSGFQKIAMLGHPSKRNK 567
++ R +GLS E ++SG + K R+++ +G+L K L P+++NK
Sbjct: 433 KRELRNASSPYGLS---ESEDSGAGDNKTRERAFASGDL----FTTPKSGSLLLPTRKNK 485
Query: 568 LSADDDVGDAARRQGRIGRGFTPTRPSTPASIDKLENAPTTKQ-RSVRTVTERNESKSGR 626
+ G A +QG+ + T P + K EN P K +++ +++N SK GR
Sbjct: 486 IQTSHK-GGGAWKQGKSESVSSLTTPGFHPIMVKSENLPVEKPFHNIKIASDKNRSKYGR 544
Query: 627 PLIKKMSERKGNARPRHISSNAQLDSPV--QSEDDHEE---XXXXXXXXXXXXXXXPFWR 681
P KK+ +RK R ++SNA S + +S+DD E+ FW+
Sbjct: 545 PPAKKVKDRKPATR---LASNANTPSDITGESDDDREDIFAAANSARKAANLACSGKFWK 601
Query: 682 QVEPFFSYLTTEDIAYLSQQIHLSDD 707
+++ F+ + +D+ + Q++ + +
Sbjct: 602 KMDHIFAAVNVDDMQNMKDQLNFAQE 627
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 140/278 (50%), Gaps = 33/278 (11%)
Query: 859 WKYHDELSHK----GN----NAMEKAKV----WPEF-----QYSEMCFSDRIIIELSEVG 901
W D+LSH GN N++ + + P F QY M +R+++EL +G
Sbjct: 788 WIGDDDLSHSDAALGNETYSNSLGQLQAREVNIPNFPVSDTQYQLMSLDERLLLELQSIG 847
Query: 902 VSIEPVPDLAQSEDEDINSEICKLEGQLHKEVVDKKNLLRKLDGILRTKKESQHREFSRR 961
V E +PDLA+ E +++++ +L+ +++E+++KK L KL ++ K+ + R+
Sbjct: 848 VFPEAMPDLAE---ETMSTDVMELKEGIYQEILNKKKKLEKLIITIQKGKDVEKRKIEHL 904
Query: 962 AMERLLLIAYEKYMAFCGSSSSKNVNRAGKHAALSFVKRTIARCQNYEESGACCFDETPF 1021
AM++L+ A++K MA GS ++K VN+ + AL F++RT+ARC+ +EE+G CF +
Sbjct: 905 AMDQLVETAHKKRMACRGSKAAK-VNKVTRQVALGFIRRTVARCRKFEETGFSCFSDPAL 963
Query: 1022 KDMFVSATSHRSDPDSASQDNITVPKSVQXXXXXXXXXXXXHLTDLSFSKEDPWTNNVKQ 1081
+D+ S+ S+ D+ S +N H + +K ++ K+
Sbjct: 964 QDILFSSPSN----DAKSSEN-----GGSGTASNTLNEPSNHQAE---AKGSGAVSSTKR 1011
Query: 1082 RELLLDEVVXXXXXXXXXXXXXXXXXXXNTKGKRSERE 1119
RE L+D+V+ +GKRSERE
Sbjct: 1012 REALIDDVIGCASSKVTTSKGSAVLSGGGAQGKRSERE 1049
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.309 0.127 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 26,269,449
Number of extensions: 1136203
Number of successful extensions: 2973
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 2930
Number of HSP's successfully gapped: 6
Length of query: 1251
Length of database: 11,106,569
Length adjustment: 110
Effective length of query: 1141
Effective length of database: 8,090,809
Effective search space: 9231613069
Effective search space used: 9231613069
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 118 (50.1 bits)