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Os01g0967100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0132) R2 : 0.0166
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0774 (0.0279) R2dN8 : 0.0215 R2N8 : 0.0166
σ : 0.249
deviance : 28.51
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.05 0.221 10.9 -0.0414 0.4 0.493 0.037 0.499 -0.135 6.27 13.43 342 -- --
22.16 0.219 10.9 -0.106 0.4 0.445 -0.0666 -- -0.154 6.2 17.27 319 -- --
22.05 0.219 10.9 -0.043 0.4 0.49 -- 0.48 -0.135 6.3 13.14 349 -- --
22.17 0.219 10.9 -0.115 0.401 0.446 -- -- -0.156 6.2 17.32 319 -- --
26.25 0.239 10.9 0.114 -- 0.171 -- 0.663 -0.0648 -- 23 2814 -- --
24.83 0.234 10.9 -0.00681 0.262 -- -0.186 -- -0.0834 6.82 -- -- -- --
24.92 0.234 10.9 -0.0101 0.262 -- -- -- -0.0829 6.8 -- -- -- --
26.28 0.239 10.9 -0.0761 -- 0.239 -- -- -0.128 -- 23.8 5723 -- --
22.48 0.221 10.9 -- 0.387 0.391 -- -- -0.137 6.24 17.84 319 -- --
28.5 0.249 10.9 -0.00427 -- -- -- -- -0.0779 -- -- -- -- --
24.92 0.234 10.9 -- 0.262 -- -- -- -0.0818 6.81 -- -- -- --
26.2 0.238 10.9 -- -- 0.211 -- -- -0.0439 -- 29.16 5699 -- --
28.51 0.249 10.9 -- -- -- -- -- -0.0774 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.55 temperature 10 90 > th dose dependent rect. 23 23
2 21.61 wind 1 14400 > th dose independent rect. 20 3
3 21.61 temperature 20 10 > th dose independent rect. 15 15
4 21.65 atmosphere 995 90 > th dose dependent rect. 5 22
10 21.75 humidity 80 14400 > th dose independent rect. 7 2
11 21.75 temperature 10 1440 > th dose dependent rect. 8 1
15 21.76 temperature 30 1440 < th dose dependent rect. 8 1
16 21.76 temperature 15 270 > th dose dependent rect. 12 23
22 21.81 temperature 10 270 > th dose dependent rect. 10 23
23 21.81 temperature 10 270 > th dose dependent rect. 21 23
49 21.89 atmosphere 1005 90 > th dose independent rect. 5 21
69 21.92 atmosphere 1015 10 < th dose dependent rect. 15 15
71 21.92 atmosphere 1015 90 < th dose dependent rect. 23 23
73 21.93 atmosphere 1015 270 < th dose dependent rect. 13 16
85 21.95 temperature 30 90 < th dose dependent rect. 8 17
86 21.95 temperature 30 10 < th dose dependent rect. 6 20
100 21.97 temperature 30 90 < th dose dependent rect. 5 22
101 21.98 humidity 70 14400 > th dose independent rect. 9 1
102 21.98 humidity 80 14400 < th dose independent rect. 8 1
116 21.99 atmosphere 995 270 > th dose dependent rect. 3 21
120 22.00 wind 1 14400 < th dose independent rect. 18 5
124 22.00 temperature 30 10 < th dose dependent rect. 9 17
129 22.01 humidity 80 14400 < th dose independent rect. 7 3
130 22.01 atmosphere 1010 90 < th dose dependent rect. 15 17
132 22.01 atmosphere 1010 90 < th dose dependent rect. 13 19
140 22.01 atmosphere 1010 90 < th dose dependent rect. 11 22
146 22.02 temperature 15 270 > th dose dependent rect. 7 23
162 22.04 atmosphere 1010 10 < th dose dependent rect. 15 17
180 22.05 atmosphere 1015 10 < th dose dependent rect. 24 22
186 22.06 temperature 15 270 > th dose dependent rect. 13 15
197 22.07 radiation 10 720 > th dose dependent rect. 16 15
225 22.09 radiation 30 1440 > th dose independent rect. 15 1
226 22.09 wind 1 14400 < th dose independent rect. 20 3
228 22.09 radiation 10 720 > th dose independent rect. 16 15
230 22.09 temperature 25 4320 > th dose dependent rect. 2 5
239 22.10 temperature 30 270 < th dose independent rect. 5 19
240 22.10 temperature 10 270 > th dose dependent no NA NA
242 22.10 humidity 50 14400 < th dose dependent rect. 16 1
254 22.10 atmosphere 1010 10 < th dose dependent rect. 12 20
261 22.11 temperature 15 90 > th dose dependent sin 15 NA
289 22.13 humidity 50 14400 > th dose independent rect. 16 1
320 22.14 temperature 30 270 < th dose independent rect. 13 11
344 22.14 temperature 10 10 > th dose dependent rect. 24 22
380 22.15 atmosphere 1015 30 < th dose dependent rect. 7 23
384 22.16 temperature 15 270 > th dose dependent sin 17 NA
386 22.16 humidity 90 14400 > th dose dependent rect. 9 4
410 22.18 temperature 30 4320 > th dose independent rect. 14 1
412 22.18 humidity 70 14400 > th dose independent rect. 8 7
414 22.18 temperature 30 270 < th dose independent rect. 11 13
431 22.18 atmosphere 995 30 > th dose dependent rect. 11 23
434 22.19 temperature 25 720 > th dose dependent sin 8 NA
437 22.19 humidity 60 14400 > th dose dependent rect. 4 6
443 22.19 humidity 50 14400 < th dose dependent rect. 16 18
445 22.19 temperature 20 270 > th dose dependent rect. 10 19
450 22.20 temperature 30 4320 < th dose independent rect. 14 1
458 22.20 humidity 70 14400 > th dose independent rect. 20 19
491 22.21 humidity 70 14400 < th dose independent rect. 9 6
497 22.21 humidity 70 14400 > th dose independent rect. 24 15
507 22.21 humidity 70 14400 > th dose dependent rect. 6 3
515 22.21 temperature 15 10 > th dose dependent rect. 16 14
517 22.21 atmosphere 995 10 > th dose dependent rect. 22 17
552 22.22 humidity 70 14400 > th dose independent rect. 18 22
565 22.22 temperature 25 90 > th dose dependent rect. 17 15
581 22.23 humidity 70 14400 > th dose independent sin 3 NA
584 22.23 humidity 90 14400 > th dose independent rect. 9 4
585 22.23 humidity 90 14400 > th dose independent rect. 9 6
590 22.23 humidity 50 14400 < th dose independent rect. 16 19
591 22.23 humidity 70 14400 < th dose independent rect. 20 20
605 22.23 temperature 25 4320 > th dose dependent rect. 24 8
703 22.24 atmosphere 995 270 > th dose dependent rect. 17 22
710 22.25 humidity 50 14400 < th dose independent rect. 16 1
712 22.25 temperature 25 1440 > th dose independent rect. 3 8
713 22.25 temperature 25 1440 < th dose independent rect. 3 8
718 22.25 temperature 25 4320 > th dose independent rect. 19 10
733 22.25 humidity 80 14400 < th dose dependent rect. 18 1
734 22.25 humidity 50 14400 > th dose dependent rect. 6 2
743 22.25 temperature 30 90 < th dose dependent rect. 21 17
760 22.26 temperature 25 4320 > th dose independent rect. 19 12
770 22.26 humidity 60 14400 > th dose dependent rect. 9 1
787 22.26 temperature 30 90 < th dose dependent rect. 11 14
799 22.26 temperature 30 270 < th dose dependent rect. 19 19
803 22.26 temperature 25 720 > th dose dependent rect. 15 21
821 22.27 humidity 50 14400 > th dose independent rect. 16 18
824 22.27 humidity 70 14400 > th dose independent rect. 14 20
830 22.27 temperature 20 90 > th dose independent rect. 23 23
846 22.27 temperature 25 720 > th dose dependent rect. 20 15
848 22.27 temperature 25 720 > th dose dependent rect. 20 17
853 22.27 humidity 50 14400 > th dose dependent rect. 18 19
866 22.27 atmosphere 995 90 > th dose dependent rect. 19 23
942 22.28 temperature 25 4320 > th dose dependent rect. 21 7
955 22.28 humidity 50 14400 > th dose dependent rect. 21 16
960 22.28 humidity 90 14400 < th dose dependent rect. 18 18
980 22.29 humidity 70 14400 > th dose independent no NA NA