BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0244500 Os05g0244500|AK064349
(525 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0244500 Glycoside hydrolase, family 5 protein 938 0.0
Os10g0370500 Actin-crosslinking proteins family protein 661 0.0
Os10g0370800 Similar to Exo-1,3-beta-glucanase precursor (E... 639 0.0
>Os05g0244500 Glycoside hydrolase, family 5 protein
Length = 525
Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/501 (92%), Positives = 462/501 (92%)
Query: 25 DAKRKTXXXXXXXXXXFGLPVRAVCLGGWLVTEGWILPSLFDAIPNKDLLDGAQLQLKAV 84
DAKRKT FGLPVRAVCLGGWLVTEGWILPSLFDAIPNKDLLDGAQLQLKAV
Sbjct: 25 DAKRKTPPSPPPPPSSFGLPVRAVCLGGWLVTEGWILPSLFDAIPNKDLLDGAQLQLKAV 84
Query: 85 AAGAYLTXXXXXXXXXXXXNRTQAAPSASETFKLWRINETTFNFRASSGRFXXXXXXXXX 144
AAGAYLT NRTQAAPSASETFKLWRINETTFNFRASSGRF
Sbjct: 85 AAGAYLTAADQGGAAAVVANRTQAAPSASETFKLWRINETTFNFRASSGRFVGAGSDGGA 144
Query: 145 XXXXXXXXPGPSETFQVVRDDGDKSRVRIRAPNGHFLQIALGSNSVTADYYGESTSWGDD 204
PGPSETFQVVRDDGDKSRVRIRAPNGHFLQIALGSNSVTADYYGESTSWGDD
Sbjct: 145 AVVAVAAAPGPSETFQVVRDDGDKSRVRIRAPNGHFLQIALGSNSVTADYYGESTSWGDD 204
Query: 205 DPSVFVVTKVLELQGEYQICNGYGTAKATPILRNHWSTYIVEDDFKFISASGLTAVRIPV 264
DPSVFVVTKVLELQGEYQICNGYGTAKATPILRNHWSTYIVEDDFKFISASGLTAVRIPV
Sbjct: 205 DPSVFVVTKVLELQGEYQICNGYGTAKATPILRNHWSTYIVEDDFKFISASGLTAVRIPV 264
Query: 265 GWWIASDPNPPAPYVGGSLQTLDNAFKWAEKYKLGVIIDLHAAPGSQNPWEHSSSRDGTQ 324
GWWIASDPNPPAPYVGGSLQTLDNAFKWAEKYKLGVIIDLHAAPGSQNPWEHSSSRDGTQ
Sbjct: 265 GWWIASDPNPPAPYVGGSLQTLDNAFKWAEKYKLGVIIDLHAAPGSQNPWEHSSSRDGTQ 324
Query: 325 EWGTSDANIAETVQVIDFLASRYAKSPSLLAVELMNEPFAPRATLESLMKYYHDGYNAVR 384
EWGTSDANIAETVQVIDFLASRYAKSPSLLAVELMNEPFAPRATLESLMKYYHDGYNAVR
Sbjct: 325 EWGTSDANIAETVQVIDFLASRYAKSPSLLAVELMNEPFAPRATLESLMKYYHDGYNAVR 384
Query: 385 KYSSTAYVIMSNRLGPHDPTEFLQFANGFPRAVIDVHYYTVFNDLFNNLTVQQNIDFIKS 444
KYSSTAYVIMSNRLGPHDPTEFLQFANGFPRAVIDVHYYTVFNDLFNNLTVQQNIDFIKS
Sbjct: 385 KYSSTAYVIMSNRLGPHDPTEFLQFANGFPRAVIDVHYYTVFNDLFNNLTVQQNIDFIKS 444
Query: 445 NFSSELKNVTTQNGPLTFVGEWVAEWRVPNATKEEYQRYAKVQMDVYGQATFGWSYWTLK 504
NFSSELKNVTTQNGPLTFVGEWVAEWRVPNATKEEYQRYAKVQMDVYGQATFGWSYWTLK
Sbjct: 445 NFSSELKNVTTQNGPLTFVGEWVAEWRVPNATKEEYQRYAKVQMDVYGQATFGWSYWTLK 504
Query: 505 NVNNHWNLEWMINNGYISLKT 525
NVNNHWNLEWMINNGYISLKT
Sbjct: 505 NVNNHWNLEWMINNGYISLKT 525
>Os10g0370500 Actin-crosslinking proteins family protein
Length = 510
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/482 (68%), Positives = 374/482 (77%), Gaps = 8/482 (1%)
Query: 44 PVRAVCLGGWLVTEGWILPSLFDAIPNKDLLDGAQLQLKAVAAGAYLTXXXXXXXXXXXX 103
P+RAV LGGWLVTEGWILPSLFD IPNKDLLDG QLQ K+V YL
Sbjct: 37 PIRAVNLGGWLVTEGWILPSLFDDIPNKDLLDGTQLQFKSVTQNMYLCAEQGGGTILVA- 95
Query: 104 NRTQAAPSASETFKLWRINETTFNFRASSGRFXXXXXXXXXXXXXXXXXPGPSETFQVVR 163
NRT A S ETFKLWRI+E TF+ R F PGP E FQ+VR
Sbjct: 96 NRTSA--SGWETFKLWRIDEDTFDLRVFDNLFVTVAGDGVTVVATVAS-PGPGEAFQIVR 152
Query: 164 DDGDKSRVRIRAPNGHFLQIALGSNSVTADYYGESTSWGDDDPSVFVVTKVLELQGEYQI 223
+ GDK+R RIRAPNG FLQ A S+SVTADY GE T+WGDDDPSVFVVT+V LQGEYQI
Sbjct: 153 N-GDKTRARIRAPNGMFLQ-AKTSDSVTADYDGE-TNWGDDDPSVFVVTRVGGLQGEYQI 209
Query: 224 CNGYGTAKATPILRNHWSTYIVEDDFKFISASGLTAVRIPVGWWIASDPNPPAPYVGGSL 283
CNGYG AKAT +LR HW TYIVE DFKFIS SGL AVRIPVGWWIASDPNPPAP+VGGSL
Sbjct: 210 CNGYGKAKATQVLREHWRTYIVESDFKFISTSGLNAVRIPVGWWIASDPNPPAPFVGGSL 269
Query: 284 QTLDNAFKWAEKYKLGVIIDLHAAPGSQNPWEHSSSRDGTQEWGTSDANIAETVQVIDFL 343
Q LDNAFKWAEKY LGVI+DLHAAPGSQNP+EHS+SRDG+Q+WGT+DANIA+TVQVIDFL
Sbjct: 270 QALDNAFKWAEKYNLGVIVDLHAAPGSQNPFEHSASRDGSQDWGTTDANIAQTVQVIDFL 329
Query: 344 ASRYAKSPSLLAVELMNEPFAPRATLESLMKYYHDGYNAVRKYSSTAYVIMSNRLGPHDP 403
RYA SPSLLAVEL+NEP AP TL +LM+YY DGYNAVRKY+STAYV+MSNRL +
Sbjct: 330 THRYASSPSLLAVELLNEPLAPGVTLPALMRYYKDGYNAVRKYTSTAYVVMSNRLSASN- 388
Query: 404 TEFLQFANGFPRAVIDVHYYTVFNDLFNNLTVQQNIDFIKSNFSSELKNVTTQNGPLTFV 463
TE L FA GFP AV+DVHYY +F FN LTV QNID++++N S EL VT NGPLTFV
Sbjct: 389 TELLGFAAGFPGAVLDVHYYNLFTSSFNGLTVDQNIDYVRTNRSDELSTVTRPNGPLTFV 448
Query: 464 GEWVAEWRVPNATKEEYQRYAKVQMDVYGQATFGWSYWTLKNVNNHWNLEWMINNGYISL 523
GEWVAEW V A+ ++YQR+A+ Q+DVYG+ATFGW+YWT KNVNNHW+++W I NG ISL
Sbjct: 449 GEWVAEWNVQGASNQDYQRFAQAQLDVYGRATFGWAYWTYKNVNNHWSMQWNIQNGIISL 508
Query: 524 KT 525
K+
Sbjct: 509 KS 510
>Os10g0370800 Similar to Exo-1,3-beta-glucanase precursor (EC 3.2.1.58) (Fragment)
Length = 1449
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/482 (65%), Positives = 364/482 (75%), Gaps = 8/482 (1%)
Query: 44 PVRAVCLGGWLVTEGWILPSLFDAIPNKDLLDGAQLQLKAVAAGAYLTXXXXXXXXXXXX 103
P+R+V LGGWLVTEGWILPSLFD IPN DLLDG L +K+V YL
Sbjct: 974 PIRSVNLGGWLVTEGWILPSLFDGIPNNDLLDGTTLHIKSVIQDKYLAAEQGGGQTIVA- 1032
Query: 104 NRTQAAPSASETFKLWRINETTFNFRASSGRFXXXXXXXXXXXXXXXXXPGPSETFQVVR 163
NR A S E+F LWR++ETTFN R +F PG SETFQ+VR
Sbjct: 1033 NRVVA--SDWESFTLWRVDETTFNLRVFKKQFMGIDSNGTVIATATT--PGLSETFQIVR 1088
Query: 164 DDGDKSRVRIRAPNGHFLQIALGSNSVTADYYGESTSWGDDDPSVFVVTKVLELQGEYQI 223
D DK+RVRIRAPNG FLQ A +NSVTADY GEST+WG+DDPSVF+V V QGEYQI
Sbjct: 1089 SDTDKNRVRIRAPNGSFLQ-AKTANSVTADY-GESTNWGNDDPSVFIVDMVGGPQGEYQI 1146
Query: 224 CNGYGTAKATPILRNHWSTYIVEDDFKFISASGLTAVRIPVGWWIASDPNPPAPYVGGSL 283
CNGYG KA+ +LR HWSTYIVE DF+FIS+SGL AVRIPVGWWIASDPNPPAP+VGGSL
Sbjct: 1147 CNGYGAEKASQVLREHWSTYIVESDFEFISSSGLNAVRIPVGWWIASDPNPPAPFVGGSL 1206
Query: 284 QTLDNAFKWAEKYKLGVIIDLHAAPGSQNPWEHSSSRDGTQEWGTSDANIAETVQVIDFL 343
Q LDNAFKWAE Y +GVI+DLHAAPGSQN WEHS++RDG+ EWGT+D +I +TVQ+IDFL
Sbjct: 1207 QALDNAFKWAENYNIGVIVDLHAAPGSQNHWEHSATRDGSLEWGTTDTSITQTVQIIDFL 1266
Query: 344 ASRYAKSPSLLAVELMNEPFAPRATLESLMKYYHDGYNAVRKYSSTAYVIMSNRLGPHDP 403
ASRYA SPSLLA+EL+NEP+ P LE L KYY D YN VRKY++ AYVIMSNRL
Sbjct: 1267 ASRYANSPSLLAIELLNEPWGPDVPLEKLKKYYEDAYNVVRKYTAKAYVIMSNRLAGESN 1326
Query: 404 TEFLQFANGFPRAVIDVHYYTVFN-DLFNNLTVQQNIDFIKSNFSSELKNVTTQNGPLTF 462
TE L FA+ FP VIDVHYY +FN D F NL V+QNI+F+K++ +E N+T Q PLTF
Sbjct: 1327 TELLDFASRFPGVVIDVHYYNLFNDDTFKNLNVEQNIEFVKNSRKAEFSNITKQKSPLTF 1386
Query: 463 VGEWVAEWRVPNATKEEYQRYAKVQMDVYGQATFGWSYWTLKNVNNHWNLEWMINNGYIS 522
VGEW AEW+V A+KEEYQR+A+ Q+DVYG+ATFGW+YW KNVNNHW+LEWMI NGYIS
Sbjct: 1387 VGEWAAEWKVNGASKEEYQRFAQAQLDVYGRATFGWAYWNFKNVNNHWSLEWMIKNGYIS 1446
Query: 523 LK 524
LK
Sbjct: 1447 LK 1448
Score = 636 bits (1641), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/482 (65%), Positives = 372/482 (77%), Gaps = 10/482 (2%)
Query: 43 LPVRAVCLGGWLVTEGWILPSLFDAIPNKDLLDGAQLQLKAVAAGAYLTXXXXXXXXXXX 102
LP+RAV LGGWLVTEGWI PSLFD I NKDLLDG QLQ K+V YL
Sbjct: 493 LPIRAVNLGGWLVTEGWIKPSLFDGISNKDLLDGTQLQFKSVTNNMYLAAENGGGSAIVA 552
Query: 103 XNRTQAAPSASETFKLWRINETTFNFRASSGRFXXXXXXXXXXXXXXXXXPGPSETFQVV 162
NR +A S ETFKLWRINETTFN R + +F PGP+ETFQ++
Sbjct: 553 -NREKA--SGWETFKLWRINETTFNLRVFNNQFVSIGGNGAVIATATV--PGPNETFQII 607
Query: 163 RDDGDKSRVRIRAPNGHFLQI-ALGSNSVTADYYGESTSWGDDDPSVFVVTKVLELQGEY 221
R D DKSR+RIRAPNG FLQ+ A+GS VTAD+ G ST+WG+DDPSVFVV + LQGEY
Sbjct: 608 RLDSDKSRMRIRAPNGKFLQVKAMGS--VTADH-GASTNWGNDDPSVFVVNNIYGLQGEY 664
Query: 222 QICNGYGTAKATPILRNHWSTYIVEDDFKFISASGLTAVRIPVGWWIASDPNPPAPYVGG 281
QICNGY AT +LR HW+T+IVEDDFKFIS++GL AVRIPVGWWIASDPNPPAP+VGG
Sbjct: 665 QICNGYSAGNATEVLREHWNTFIVEDDFKFISSNGLNAVRIPVGWWIASDPNPPAPFVGG 724
Query: 282 SLQTLDNAFKWAEKYKLGVIIDLHAAPGSQNPWEHSSSRDGTQEWGTSDANIAETVQVID 341
SLQ LDNAFKWAEKY +G+I+DLHAAPGSQN +HS+SRDG+ EWGTS ANIA+TV VID
Sbjct: 725 SLQALDNAFKWAEKYNIGIIVDLHAAPGSQNRLDHSASRDGSLEWGTSAANIAQTVGVID 784
Query: 342 FLASRYAKSPSLLAVELMNEPFAPRATLESLMKYYHDGYNAVRKYSSTAYVIMSNRLGPH 401
FLASRYAKS SLLA+EL+NEP AP +++L KYY D YNAVRKY+ AYVI+S R+
Sbjct: 785 FLASRYAKSSSLLAIELLNEPLAPDVPVDTLTKYYQDAYNAVRKYTLQAYVILSTRMS-G 843
Query: 402 DPTEFLQFANGFPRAVIDVHYYTVFNDLFNNLTVQQNIDFIKSNFSSELKNVTTQNGPLT 461
DPTEFL A+ AVIDVHYY ++N +F+N TV+QNI+F+++N SS++ VT QN PLT
Sbjct: 844 DPTEFLSVASSLFGAVIDVHYYNLYNSMFDNYTVEQNINFVRNNRSSDINTVTKQNVPLT 903
Query: 462 FVGEWVAEWRVPNATKEEYQRYAKVQMDVYGQATFGWSYWTLKNVNNHWNLEWMINNGYI 521
FVGEWVAEW V NA+KE+YQ +A+ Q+D+YG+ATFGWSYWT KNV NHW++EWMI NGYI
Sbjct: 904 FVGEWVAEWYVDNASKEDYQNFAQAQLDLYGKATFGWSYWTFKNVKNHWSMEWMIKNGYI 963
Query: 522 SL 523
SL
Sbjct: 964 SL 965
Score = 623 bits (1607), Expect = e-179, Method: Compositional matrix adjust.
Identities = 306/477 (64%), Positives = 360/477 (75%), Gaps = 6/477 (1%)
Query: 48 VCLGGWLVTEGWILPSLFDAIPNKDLLDGAQLQLKAVAAGAYLTXXXXXXXXXXXXNRTQ 107
V LGGWLVTEGWILPSLFD IPN D LDG +LQ K+V YL +RT
Sbjct: 17 VNLGGWLVTEGWILPSLFDDIPNNDFLDGTKLQFKSVVHNTYLCAEHGGGDIVVA-DRT- 74
Query: 108 AAPSASETFKLWRINETTFNFRA-SSGRFXXXXXXXXXXXXXXXXXPGPSETFQVVRDDG 166
A S ETFKLWR++E TFN +A PGPSETF +VR D
Sbjct: 75 -AASGWETFKLWRVDENTFNLKAIDDSAVHFVGVDGNGVVVATAATPGPSETFVIVRSDR 133
Query: 167 DKSRVRIRAPNGHFLQIALGSNSVTADYYGESTSWGDDDPSVFVVTKVLELQGEYQICNG 226
D SR+RIRA NG FLQ A + SVTAD+ GE TSWGDDDPSVF + + +LQGEYQ+CNG
Sbjct: 134 DNSRIRIRASNGKFLQ-AKTTVSVTADH-GEGTSWGDDDPSVFAINRGEKLQGEYQLCNG 191
Query: 227 YGTAKATPILRNHWSTYIVEDDFKFISASGLTAVRIPVGWWIASDPNPPAPYVGGSLQTL 286
YG KAT +LR HWSTYI+E+DFKFIS++GL AVRIPVGWWIASDPNPPAP+VGGSL+ L
Sbjct: 192 YGMKKATEVLREHWSTYILENDFKFISSNGLNAVRIPVGWWIASDPNPPAPFVGGSLEAL 251
Query: 287 DNAFKWAEKYKLGVIIDLHAAPGSQNPWEHSSSRDGTQEWGTSDANIAETVQVIDFLASR 346
DNAF+WAEKY LGVI+DLHAAPGSQNPWEHS SRDG+Q WGT+D I +TVQVIDFLASR
Sbjct: 252 DNAFRWAEKYNLGVIVDLHAAPGSQNPWEHSGSRDGSQTWGTTDETIIQTVQVIDFLASR 311
Query: 347 YAKSPSLLAVELMNEPFAPRATLESLMKYYHDGYNAVRKYSSTAYVIMSNRLGPHDPTEF 406
YAKSPSLLAVEL+NEP AP+ + L KYY D YNAVRKY+S AYVIMSN + E
Sbjct: 312 YAKSPSLLAVELLNEPLAPKVSAGMLKKYYQDAYNAVRKYTSDAYVIMSNPINADYSNEI 371
Query: 407 LQFANGFPRAVIDVHYYTVFNDLFNNLTVQQNIDFIKSNFSSELKNVTTQNGPLTFVGEW 466
LQFA GF AV DVHYY +FN F+N T + NI F++++ S+EL++VT QNGPLT+VGEW
Sbjct: 372 LQFAGGFFGAVFDVHYYNMFNGSFDNTTAEWNIQFVRNDRSAELRSVTKQNGPLTYVGEW 431
Query: 467 VAEWRVPNATKEEYQRYAKVQMDVYGQATFGWSYWTLKNVNNHWNLEWMINNGYISL 523
VAEW+V NA++E+Y+R+A+ Q+DVY QATFGW+YW+ K+V NHW+LEWMI NGYISL
Sbjct: 432 VAEWKVNNASEEDYKRFAQAQLDVYSQATFGWAYWSFKHVQNHWSLEWMIKNGYISL 488
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.133 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,695,769
Number of extensions: 674927
Number of successful extensions: 1401
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1383
Number of HSP's successfully gapped: 5
Length of query: 525
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 420
Effective length of database: 11,553,331
Effective search space: 4852399020
Effective search space used: 4852399020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)