BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0209100 Os05g0209100|AK069043
(645 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0209100 Glycoside hydrolase, family 47 protein 1283 0.0
Os04g0606400 Similar to Mannosyl-oligosaccharide 1,2-alpha-... 350 3e-96
Os01g0773600 Glycoside hydrolase, family 47 protein 178 1e-44
AK110459 108 1e-23
Os02g0741300 Glycoside hydrolase, family 47 protein 105 1e-22
>Os05g0209100 Glycoside hydrolase, family 47 protein
Length = 645
Score = 1283 bits (3321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/636 (98%), Positives = 626/636 (98%)
Query: 10 PLPYSMRDVDGRGAYNNAKFRHRSRLKMASQALFTNSSKYQCGKFTVGKFLSLLMVSGVI 69
PLPYSMRDVDGRGAYNNAKFRHRSRLKMASQALFTNSSKYQCGKFTVGKFLSLLMVSGVI
Sbjct: 10 PLPYSMRDVDGRGAYNNAKFRHRSRLKMASQALFTNSSKYQCGKFTVGKFLSLLMVSGVI 69
Query: 70 YLLVHKSSDGFVSGELHEKVGNTHTKKDFPKIRTFWRKXXXXXXXXXXNEIYRNNSLLLQ 129
YLLVHKSSDGFVSGELHEKVGNTHTKKDFPKIRTFWRK NEIYRNNSLLLQ
Sbjct: 70 YLLVHKSSDGFVSGELHEKVGNTHTKKDFPKIRTFWRKPPRLPPRLPPNEIYRNNSLLLQ 129
Query: 130 SPQSEWTLRQKKVKEAFEHAWSGYRNYAMGYDELMPLTRRGIDGLGGLGATVVDSLDTAI 189
SPQSEWTLRQKKVKEAFEHAWSGYRNYAMGYDELMPLTRRGIDGLGGLGATVVDSLDTAI
Sbjct: 130 SPQSEWTLRQKKVKEAFEHAWSGYRNYAMGYDELMPLTRRGIDGLGGLGATVVDSLDTAI 189
Query: 190 IMGADDVVSEASKWIEDNLMKKLSEKGQVNLFETTIRVLGGLLSAYHLSGGDKARGDSGI 249
IMGADDVVSEASKWIEDNLMKKLSEKGQVNLFETTIRVLGGLLSAYHLSGGDKARGDSGI
Sbjct: 190 IMGADDVVSEASKWIEDNLMKKLSEKGQVNLFETTIRVLGGLLSAYHLSGGDKARGDSGI 249
Query: 250 PMTSKRANPERLLEVSKDLADRLLLAFTSSPTAIPLSDVVLRDRTAHAAPDGLSSTSEAT 309
PMTSKRANPERLLEVSKDLADRLLLAFTSSPTAIPLSDVVLRDRTAHAAPDGLSSTSEAT
Sbjct: 250 PMTSKRANPERLLEVSKDLADRLLLAFTSSPTAIPLSDVVLRDRTAHAAPDGLSSTSEAT 309
Query: 310 TLQLEYSYLSTISGDPKYDLEAMKVLEHMRTLPTVEGLVPIYINPSSGQFSGENIRLGSR 369
TLQLEYSYLSTISGDPKYDLEAMKVLEHMRTLPTVEGLVPIYINPSSGQFSGENIRLGSR
Sbjct: 310 TLQLEYSYLSTISGDPKYDLEAMKVLEHMRTLPTVEGLVPIYINPSSGQFSGENIRLGSR 369
Query: 370 GDSYYEYLLKVWVQQERYRDTSLKYLFEMYTEAMKGVKHLLVRKTIPNGLVFVGELPYGR 429
GDSYYEYLLKVWVQQERYRDTSLKYLFEMYTEAMKGVKHLLVRKTIPNGLVFVGELPYGR
Sbjct: 370 GDSYYEYLLKVWVQQERYRDTSLKYLFEMYTEAMKGVKHLLVRKTIPNGLVFVGELPYGR 429
Query: 430 NSGFSPKMDHLVCFLPGTLALGATKGITKKKALENHLLTAEDIDNLQLAEDLAKTCVEMY 489
NSGFSPKMDHLVCFLPGTLALGATKGITKKKALENHLLTAEDIDNLQLAEDLAKTCVEMY
Sbjct: 430 NSGFSPKMDHLVCFLPGTLALGATKGITKKKALENHLLTAEDIDNLQLAEDLAKTCVEMY 489
Query: 490 FVTSTGLAPEIAYFHIEGNSEGGPDGGNKSSQYVNDIIIKPLDRHNLLRPETVESLFVLY 549
FVTSTGLAPEIAYFHIEGNSEGGPDGGNKSSQYVNDIIIKPLDRHNLLRPETVESLFVLY
Sbjct: 490 FVTSTGLAPEIAYFHIEGNSEGGPDGGNKSSQYVNDIIIKPLDRHNLLRPETVESLFVLY 549
Query: 550 RITEDPKYREWGWQIFQAFEKYTRVDSGGYTSLDDVTSLPPPRRDKMETFFLGETLKYLY 609
RITEDPKYREWGWQIFQAFEKYTRVDSGGYTSLDDVTSLPPPRRDKMETFFLGETLKYLY
Sbjct: 550 RITEDPKYREWGWQIFQAFEKYTRVDSGGYTSLDDVTSLPPPRRDKMETFFLGETLKYLY 609
Query: 610 LLFGESNILPLDKYVFNTEAHPLPIIQSAQQISHSV 645
LLFGESNILPLDKYVFNTEAHPLPIIQSAQQISHSV
Sbjct: 610 LLFGESNILPLDKYVFNTEAHPLPIIQSAQQISHSV 645
>Os04g0606400 Similar to Mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC
3.2.1.113)
Length = 572
Score = 350 bits (897), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 219/512 (42%), Positives = 298/512 (58%), Gaps = 64/512 (12%)
Query: 138 RQKKVKEAFEHAWSGYRNYAMGYDELMPLTRRGIDGLGGLGATVVDSLDTAIIMGADDVV 197
R++KVKEA HAW+ Y YA G DEL P ++ G++ GGLGAT+VDSLDT IMG D
Sbjct: 103 RREKVKEAMAHAWNSYVKYAWGMDELQPQSKNGVNSFGGLGATLVDSLDTLYIMGLKDEF 162
Query: 198 SEASKWIEDNLMKKLSEKGQVNLFETTIRVLGGLLSAYHLSGGDKARGDSGIPMTSKRAN 257
A W+ D+L + ++FETTIRV+GGLLSAY LS GDK
Sbjct: 163 QRARDWVADSL--SFDKDYDASVFETTIRVVGGLLSAYDLS-GDKV-------------- 205
Query: 258 PERLLEVSKDLADRLLLAFTSSPTAIPLSDVVLRDRTAH--AAPDGLSSTSEATTLQLEY 315
LE +KD+ DRLL A+ +P+ IP + + L AH +G S +++ T QLE+
Sbjct: 206 ---FLEKAKDITDRLLPAW-DTPSGIPYNRINLAHGRAHNPGWTNGDSILADSGTEQLEF 261
Query: 316 SYLSTISGDPKYDLEAMKVLEHMRTLPTVEGLVPIYINPSSGQFSGENIRLGSRGDSYYE 375
LS +GDPKY +A V+ ++ + +GL+PIYINP SG S I G+ GDS+YE
Sbjct: 262 IALSQRTGDPKYQQKAENVIRQLQKIYPSDGLLPIYINPHSGTASYSTITFGAMGDSFYE 321
Query: 376 YLLKVWVQQERYRDTSLKYLFEMYTEAMKGVKHLLVRKTIPNGLVFVGELPYGRNSG-FS 434
YLLKVWVQ + +K+ +M+ +M+G+ L +KT P+ ++ E +N G S
Sbjct: 322 YLLKVWVQGN--KTEHVKHYRQMWETSMEGLLS-LTKKTTPSNYYYICE----KNGGSLS 374
Query: 435 PKMDHLVCFLPGTLALGATKGITKKKALENHLLTAEDIDNLQLAEDLAKTCVEMYFVTST 494
KMD L CF PG LALGA+ +K AE+I N LA++LA+TC Y T T
Sbjct: 375 DKMDELACFAPGMLALGASGYEETEK--------AEEIMN--LAKELARTCYNFYQTTPT 424
Query: 495 GLAPEIAYFHIEGNSEGGPDGGNKSSQYVNDIIIKPLDRHNLLRPETVESLFVLYRITED 554
LA E +FH G D +S N+LRPETVESL L+R+T +
Sbjct: 425 KLAGENYFFHT------GQDMNVGTSW-------------NILRPETVESLMYLWRLTGN 465
Query: 555 PKYREWGWQIFQAFEKYTRVDSGGYTSLDDVTSLPPPRRDKMETFFLGETLKYLYLLFGE 614
Y++WGW IFQAFEK +R++S GY L DV + + + M++FFL ETLKYLYLLF
Sbjct: 466 KTYQDWGWDIFQAFEKNSRIES-GYVGLRDVNT--GEKDNMMQSFFLAETLKYLYLLFSP 522
Query: 615 SNILPLDKYVFNTEAHPLPIIQ-SAQQISHSV 645
+++ D++VFNTEAHPL I+ + +HSV
Sbjct: 523 PSVISFDEWVFNTEAHPLRIVPLNDNSKAHSV 554
>Os01g0773600 Glycoside hydrolase, family 47 protein
Length = 684
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 155/507 (30%), Positives = 237/507 (46%), Gaps = 75/507 (14%)
Query: 133 SEWTLRQKKVKEAFEHAWSGYRNYAMGYDELMPLTRRGIDGLGGLGATVVDSLDTAIIMG 192
SE + +VK+ F HA+ GY +A DEL PL+ +G D LGG T++DSLDT ++G
Sbjct: 51 SEARRLRDEVKDMFYHAFDGYMQHAFPLDELRPLSCQGEDSLGGYALTLIDSLDTLALLG 110
Query: 193 ADDVVSEASKWIEDNLMKKLSEKGQVNLFETTIRVLGGLLSAYHLSGGDKARGDSGIPMT 252
+ A +W+ N+ +++ V++FET IR+LGGLLSA HL D A G
Sbjct: 111 DKERFDAAVEWVGKNVRFDINKT--VSVFETNIRILGGLLSA-HLIASDYATG------M 161
Query: 253 SKRANPERLLEVSKDLADRLLLAFTSSPTAIPLSDVVLRDRTAHAAPDGLSSTSEATTLQ 312
++ ++LL ++ DLA RLL AF +PT IP V L ++ST+ TL
Sbjct: 162 RIQSYDDQLLHLAADLAQRLLPAF-DTPTGIPFGSVNLL-YGVDENESKITSTAGGGTLT 219
Query: 313 LEYSYLSTISGDPKYDLEAMKVLEHMRTLPTVEGLVPIYINPSSGQFSGENIRLGSRGDS 372
LE+ LS ++ D Y+ + + + LV +IN +G+++ ++ +G+ DS
Sbjct: 220 LEFGVLSRLTNDSVYERVTKNSVRGIWARRSKLDLVGAHINVFTGEWTQKDAGIGTSIDS 279
Query: 373 YYEYLLKVWVQQERYRDTSLKYLFEMYTEAMKGVKHLLVRKTIPNGLVFVGELPYGRNSG 432
+YEYLLK ++ + D Y+F+ EA K H L + E+ +
Sbjct: 280 FYEYLLKAYL---LFGDEEYLYIFQ---EAYKAAMHYLHHDP------WYVEVNMNSGAT 327
Query: 433 FSPKMDHLVCFLPGTLALGATKGITKKKALENHLLTAEDIDNLQLAEDLAKTCVEMYFVT 492
P + L F PG L A D+D
Sbjct: 328 VWPLFNSLQAFWPGLQVL------------------AGDVD------------------- 350
Query: 493 STGLAPEIAYFHIEGNSEGGPDGGNKSSQYVNDIIIKPLDRHNLLRPETVESLFVLYRIT 552
+ A+F + P+G N ++ V + R LRPE +ES + L++ T
Sbjct: 351 -PAIRTHAAFFSVWKKYGFTPEGFNLATSTVQNG-----QRSYPLRPELIESTYWLFKAT 404
Query: 553 EDPKYREWGWQIFQAFEKYTRVDSGGYTSLDDVTSLPPPRRDKMETFFLGETLKYLYLLF 612
D +Y + G I + + Y GY + DV + + D ME+FFL ET+KYL+LLF
Sbjct: 405 RDYRYLDVGRDILASLQ-YGAKCPCGYCHISDVET--HQQDDHMESFFLAETVKYLWLLF 461
Query: 613 ----GESNILPLD--KYVFNTEAHPLP 633
G NI+ KY+F+TE H LP
Sbjct: 462 DLAAGPDNIVENGPYKYIFSTEGHLLP 488
>AK110459
Length = 440
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Query: 533 RHNLLRPETVESLFVLYRITEDPKYREWGWQIFQAFEKYTRVDSGGYTSLDDVTSLPPPR 592
R +LRPE +ES++ +YRIT D +RE GW++F+A E++T G +++DDVT L P
Sbjct: 338 RDYILRPEAIESVWYMYRITGDNHWREAGWRMFKAIEEHTATKFGN-SAIDDVTKLIPAI 396
Query: 593 RDKMETFFLGETLKYLYLLFGESNILPLDKYVFNTEAHPL 632
+D+ME+F+L ETLKY YLLF +++ LD +V NTEAHP
Sbjct: 397 KDEMESFWLAETLKYFYLLFDTEDVISLDDWVLNTEAHPF 436
>Os02g0741300 Glycoside hydrolase, family 47 protein
Length = 585
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 134/273 (49%), Gaps = 38/273 (13%)
Query: 139 QKKVKEAFEHAWSGYRNYAMGYDELMPLTRRGIDGLGGLG---------------ATVVD 183
+ KV E F HA+ Y YA +DEL PLT+ D L LG T+V+
Sbjct: 49 RNKVLEMFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLNLEHLPNDYNGSALTLVE 108
Query: 184 SLDTAIIMGADDVVSEASKWIEDNLMKKLSEKGQVNLFETTIRVLGGLLSAYHLSGGDKA 243
SL + +++G W+ +NL ++NLFE IR+LGGL+S + L+ +
Sbjct: 109 SLSSLVVLGNLTEFERGVLWLSENL--TFDVDARINLFECNIRLLGGLISGHILAKEHSS 166
Query: 244 RGDSGIPMTSKRANPERLLEVSKDLADRLLLAFTSSPTAIPLSDV-----VLRDRTAHAA 298
G ++LL ++++L R L AF +PT +P + + V+ + T
Sbjct: 167 HLKDG-------PYQDQLLHLAENLGSRFLPAF-ETPTGLPYAWINLKYGVMENETTE-- 216
Query: 299 PDGLSSTSEATTLQLEYSYLSTISGDPKYDLEAMKVLEHMRTLPTVEGLVPIYINPSSGQ 358
+STS +L LE LS ++GD +Y+ A++ L + ++ + LV ++ +G+
Sbjct: 217 ----TSTSGCGSLILEMGALSRLTGDSRYEAAALRALRKLWSMRSSLNLVGTTLDVLTGK 272
Query: 359 FSGENIRLGSRGDSYYEYLLKVWV--QQERYRD 389
+ + +G+ DS+YEYL+K +V E Y D
Sbjct: 273 WIEYSSGIGAGVDSFYEYLIKAYVLFGSEEYWD 305
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Query: 527 IIKPLDRHNLLRPETVESLFVLYRITEDPKYREWGWQIFQAFEKYTRVDSGGYTSLDDVT 586
++ P +++ LRPE ES F LY+ T+DP Y E G I + YT+VD GG+ S+ DV+
Sbjct: 386 MLHPTEKYYPLRPEFAESTFYLYQATKDPWYLEVGEAIIGSLNYYTKVD-GGFASVRDVS 444
Query: 587 SLPPPRRDKMETFFLGETLKYLYLLFGESNILPLDKYVFNTEAHPLPIIQSAQQI 641
++ D +FFL ET KYL+LL+ +S L Y+F TE HPLPI + +I
Sbjct: 445 TM--KLEDHQHSFFLSETCKYLFLLYDDS-FLRNQNYIFTTEGHPLPIRSTWHEI 496
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.135 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,707,560
Number of extensions: 915168
Number of successful extensions: 2270
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2254
Number of HSP's successfully gapped: 6
Length of query: 645
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 538
Effective length of database: 11,448,903
Effective search space: 6159509814
Effective search space used: 6159509814
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)