Os05g0209100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 47 protein.
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Os05g0209100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 47 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.64 | 0.4 | 8.36 | -0.211 | 0.941 | 1.37 | 0.422 | 0.367 | 0.042 | 9.54 | 20.3 | 1205 | -- | -- |
| 72.94 | 0.398 | 8.36 | -0.256 | 0.951 | 1.3 | 0.37 | -- | 0.0408 | 9.47 | 20.3 | 1187 | -- | -- |
| 73.23 | 0.399 | 8.36 | -0.209 | 0.941 | 1.35 | -- | 0.285 | 0.0403 | 9.41 | 20.34 | 1205 | -- | -- |
| 73.21 | 0.398 | 8.37 | -0.225 | 0.973 | 1.26 | -- | -- | 0.0315 | 9.43 | 20.6 | 1114 | -- | -- |
| 120.57 | 0.511 | 8.38 | -0.213 | -- | 1.35 | -- | 0.325 | 0.0507 | -- | 20.3 | 1449 | -- | -- |
| 112.53 | 0.497 | 8.3 | 0.266 | 0.88 | -- | 0.235 | -- | 0.316 | 9.13 | -- | -- | -- | -- |
| 112.7 | 0.497 | 8.3 | 0.273 | 0.881 | -- | -- | -- | 0.315 | 9.03 | -- | -- | -- | -- |
| 120.86 | 0.512 | 8.39 | -0.273 | -- | 1.33 | -- | -- | 0.0339 | -- | 20.3 | 1450 | -- | -- |
| 74.39 | 0.402 | 8.35 | -- | 0.962 | 1.16 | -- | -- | 0.0739 | 9.43 | 20.54 | 1113 | -- | -- |
| 157.36 | 0.586 | 8.33 | 0.272 | -- | -- | -- | -- | 0.321 | -- | -- | -- | -- | -- |
| 114.67 | 0.501 | 8.31 | -- | 0.882 | -- | -- | -- | 0.285 | 9.01 | -- | -- | -- | -- |
| 122.45 | 0.515 | 8.38 | -- | -- | 1.17 | -- | -- | 0.0711 | -- | 20.5 | 1434 | -- | -- |
| 159.31 | 0.589 | 8.33 | -- | -- | -- | -- | -- | 0.29 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.74 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 2 | 69.21 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 18 |
| 6 | 69.92 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 7 | 69.94 | temperature | 30 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 12 | 70.40 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 22 |
| 14 | 70.46 | temperature | 15 | 90 | > th | dose dependent | rect. | 4 | 19 |
| 24 | 71.18 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 18 |
| 34 | 71.69 | temperature | 10 | 720 | > th | dose dependent | sin | 6 | NA |
| 55 | 72.19 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 13 |
| 56 | 72.20 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 89 | 72.75 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 14 |
| 91 | 72.78 | temperature | 20 | 720 | > th | dose independent | sin | 6 | NA |
| 104 | 72.97 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 141 | 73.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 143 | 73.48 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 22 |
| 162 | 73.79 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 21 |
| 172 | 73.89 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 180 | 73.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 15 |
| 195 | 74.08 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 17 |
| 197 | 74.08 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 293 | 74.62 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 11 |
| 333 | 74.78 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 5 |
| 336 | 74.79 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 341 | 74.80 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 349 | 74.85 | temperature | 20 | 1440 | > th | dose independent | sin | 13 | NA |
| 350 | 74.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 11 |
| 366 | 74.90 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 380 | 74.97 | temperature | 20 | 1440 | < th | dose independent | sin | 13 | NA |
| 406 | 75.05 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 410 | 75.06 | temperature | 20 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 412 | 75.07 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 434 | 75.10 | temperature | 20 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 484 | 75.23 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 495 | 75.25 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 17 |
| 502 | 75.26 | temperature | 20 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 505 | 75.27 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 506 | 75.27 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 7 |
| 513 | 75.28 | temperature | 20 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 520 | 75.30 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 521 | 75.30 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 20 |
| 550 | 75.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 558 | 75.39 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 7 |
| 560 | 75.39 | temperature | 20 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 620 | 75.54 | temperature | 20 | 720 | < th | dose independent | sin | 4 | NA |
| 647 | 75.58 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 693 | 75.69 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 698 | 75.72 | temperature | 20 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 713 | 75.75 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 20 |
| 757 | 75.83 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 3 |
| 847 | 76.04 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 15 |
| 875 | 76.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 3 |
| 938 | 76.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 8 |