Os04g0606400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC 3.2.1.113).
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Os04g0606400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC 3.2.1.113).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.13 | 0.24 | 12.6 | 0.521 | 0.56 | 2.57 | -0.00891 | -6.05 | 0.386 | 23.5 | 0.05446 | 278 | -- | -- |
| 27.54 | 0.244 | 12.6 | 0.628 | 0.536 | 1 | -0.115 | -- | 0.408 | 23.6 | 0.9658 | 302 | -- | -- |
| 26.13 | 0.238 | 12.6 | 0.517 | 0.559 | 2.52 | -- | -5.95 | 0.386 | 23.5 | 0.05468 | 283 | -- | -- |
| 27.01 | 0.242 | 12.6 | 0.585 | 0.541 | 0.74 | -- | -- | 0.373 | 23.5 | 0.6527 | 407 | -- | -- |
| 45.26 | 0.313 | 12.6 | 0.516 | -- | 1.99 | -- | -3.41 | 0.404 | -- | 0.5 | 306 | -- | -- |
| 29.12 | 0.253 | 12.6 | 0.638 | 0.566 | -- | 0.119 | -- | 0.364 | 23.4 | -- | -- | -- | -- |
| 29.18 | 0.253 | 12.6 | 0.633 | 0.565 | -- | -- | -- | 0.364 | 23.5 | -- | -- | -- | -- |
| 44.81 | 0.312 | 12.6 | 0.577 | -- | 0.902 | -- | -- | 0.384 | -- | 1.391 | 515 | -- | -- |
| 33.17 | 0.268 | 12.6 | -- | 0.55 | 0.562 | -- | -- | 0.348 | 23.7 | 0.5 | 6679 | -- | -- |
| 49.23 | 0.328 | 12.6 | 0.648 | -- | -- | -- | -- | 0.37 | -- | -- | -- | -- | -- |
| 39.74 | 0.295 | 12.6 | -- | 0.572 | -- | -- | -- | 0.293 | 23.5 | -- | -- | -- | -- |
| 51.86 | 0.335 | 12.6 | -- | -- | 0.657 | -- | -- | 0.366 | -- | 1.034 | 2090 | -- | -- |
| 60.31 | 0.362 | 12.6 | -- | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.77 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 2 | 23.80 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 4 | 23.86 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 5 | 23.86 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 7 | 23.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 8 | 23.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 53 | 24.45 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 60 | 24.59 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 9 |
| 63 | 24.64 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 66 | 24.66 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 91 | 25.28 | precipitation | 0.1 | 270 | > th | dose independent | sin | 12 | NA |
| 98 | 25.36 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 100 | 25.37 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 18 | 7 |
| 101 | 25.38 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 105 | 25.42 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 9 |
| 114 | 25.47 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 17 | 12 |
| 118 | 25.49 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 127 | 25.54 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 17 |
| 128 | 25.54 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 133 | 25.55 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 7 |
| 138 | 25.58 | wind | 1.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 140 | 25.58 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 5 |
| 146 | 25.60 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 149 | 25.60 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 5 |
| 153 | 25.61 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 10 | NA |
| 157 | 25.63 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 162 | 25.65 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 168 | 25.67 | wind | 1.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 174 | 25.70 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 179 | 25.73 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 1 |
| 180 | 25.73 | wind | 1.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 182 | 25.74 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 184 | 25.75 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 17 |
| 199 | 25.77 | wind | 1.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 208 | 25.79 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 229 | 25.84 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 250 | 25.86 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 14 |
| 251 | 25.87 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 257 | 25.88 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 264 | 25.89 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 265 | 25.89 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 274 | 25.90 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 280 | 25.91 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 14 |
| 281 | 25.91 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 283 | 25.92 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 9 | 9 |
| 284 | 25.92 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 9 | 9 |
| 286 | 25.92 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 291 | 25.92 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 9 | 9 |
| 312 | 25.95 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 313 | 25.95 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 318 | 25.96 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 322 | 25.96 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 10 |
| 323 | 25.96 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 13 |
| 324 | 25.97 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 12 |
| 329 | 25.97 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 12 |
| 333 | 25.98 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 346 | 25.99 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 12 |
| 347 | 25.99 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 22 |
| 359 | 26.00 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 360 | 26.00 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 367 | 26.00 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 6 |
| 380 | 26.01 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 12 | 15 |
| 386 | 26.02 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 23 | NA |
| 393 | 26.03 | wind | 5.0 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 400 | 26.03 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 11 | 17 |
| 402 | 26.04 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 412 | 26.04 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 13 | 13 |
| 419 | 26.05 | wind | 5.0 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 421 | 26.05 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 433 | 26.06 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 458 | 26.08 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 480 | 26.09 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 487 | 26.10 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 491 | 26.10 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 513 | 26.11 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 14 |
| 524 | 26.11 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 14 |
| 527 | 26.12 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 14 |
| 529 | 26.12 | humidity | 70.0 | 43200 | > th | dose dependent | sin | 16 | NA |
| 534 | 26.12 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 10 | 12 |
| 542 | 26.13 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 594 | 26.14 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 17 | 17 |
| 598 | 26.15 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 600 | 26.15 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 602 | 26.15 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 654 | 26.15 | wind | 5.0 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 656 | 26.15 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 23 |
| 658 | 26.15 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 660 | 26.15 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 663 | 26.15 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 731 | 26.16 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 732 | 26.16 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 11 |
| 733 | 26.16 | wind | 5.0 | 14400 | < th | dose independent | rect. | 17 | 19 |
| 746 | 26.17 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 764 | 26.17 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 19 | 9 |
| 778 | 26.18 | precipitation | 0.1 | 270 | > th | dose independent | no | NA | NA |
| 779 | 26.18 | precipitation | 0.1 | 270 | < th | dose independent | no | NA | NA |
| 783 | 26.18 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 6 |
| 785 | 26.18 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 9 |
| 788 | 26.18 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 20 |
| 795 | 26.18 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 21 | 23 |
| 796 | 26.18 | precipitation | 0.1 | 270 | < th | dose dependent | no | NA | NA |
| 815 | 26.19 | precipitation | 0.1 | 270 | < th | dose independent | sin | 14 | NA |
| 823 | 26.19 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 827 | 26.19 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 18 |
| 832 | 26.19 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 23 |
| 835 | 26.19 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 14 | NA |
| 836 | 26.19 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 856 | 26.19 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 19 |
| 866 | 26.20 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 7 |
| 869 | 26.20 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 899 | 26.20 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 17 |
| 907 | 26.21 | wind | 7.0 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 917 | 26.21 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 19 |
| 926 | 26.21 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 4 |
| 932 | 26.21 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 19 | 9 |
| 948 | 26.21 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 17 |
| 970 | 26.22 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 2 |