BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0606400 Os04g0606400|AK102588
(572 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G51590.1 | chr1:19128315-19132132 REVERSE LENGTH=561 790 0.0
AT3G21160.1 | chr3:7414129-7418328 REVERSE LENGTH=573 790 0.0
AT1G30000.1 | chr1:10509532-10512320 REVERSE LENGTH=625 343 1e-94
AT5G43710.1 | chr5:17552252-17556523 REVERSE LENGTH=625 211 1e-54
AT1G27520.1 | chr1:9558752-9562091 FORWARD LENGTH=575 207 2e-53
>AT1G51590.1 | chr1:19128315-19132132 REVERSE LENGTH=561
Length = 560
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/560 (70%), Positives = 451/560 (80%), Gaps = 14/560 (2%)
Query: 13 GAWRYLNPAYYLKRPKRXXXXXXXXXXXXXXXWDRQSLVREYESEISRLDDKVNQLRDQL 72
G W+YLNPAYYL+RP+R WDR +L RE+E E+ +L+++V++L L
Sbjct: 11 GIWKYLNPAYYLRRPRRLALLFIVFVSVSMLVWDRINLAREHEVEVFKLNEEVSRLEQML 70
Query: 73 RKAGVHLDENPTGDKVSREKLVEIDPINNERREKVKEAMAHAWNSYVKYAWGMDELQPQS 132
+ + P + K DP++ +RR+KVKEAM HAW+SY KYAWG DELQP++
Sbjct: 71 EELNGGVGNKP----LKTLKDAPEDPVDKQRRQKVKEAMIHAWSSYEKYAWGKDELQPRT 126
Query: 133 KNGVNSFGGLGATLVDSLDTLYIMGLKDEFQRARDWVADSLSFDKDYDASVFETTIRVVG 192
K+G +SFGGLGAT+VDSLDTLYIMGL ++FQ+AR+WVA SL FDKDYDAS+FETTIRVVG
Sbjct: 127 KDGTDSFGGLGATMVDSLDTLYIMGLDEQFQKAREWVASSLDFDKDYDASMFETTIRVVG 186
Query: 193 GLLSAYDLSGDKVFLEKAKDITDRLLPAWDTPSGIPYNRINLAHGRAHNPGWT-NGDSIL 251
GLLSAYDLSGDK+FLEKAKDI DRLLPAW+TP+GIPYN INL +G AHNP W GDSIL
Sbjct: 187 GLLSAYDLSGDKMFLEKAKDIADRLLPAWNTPTGIPYNIINLRNGNAHNPSWAAGGDSIL 246
Query: 252 ADSGTEQLEFIALSQRTGDPKYQQKAENVIRQLQKIYPSDGLLPIYINPHSGTASYSTIT 311
ADSGTEQLEFIALSQRTGDPKYQQK E VI +L K +P+DGLLPIYINP + SYST T
Sbjct: 247 ADSGTEQLEFIALSQRTGDPKYQQKVEKVITELNKNFPADGLLPIYINPDNANPSYSTTT 306
Query: 312 FGAMGDSFYEYLLKVWVQGNKTEHVKHYRQMWETSMEGLLSLTKKTTPSNYYYICEKNGG 371
FGAMGDSFYEYLLKVWVQGNKT VK YR MWE SM+GLLSL KK+TPS++ YICEKNG
Sbjct: 307 FGAMGDSFYEYLLKVWVQGNKTSAVKPYRDMWEKSMKGLLSLVKKSTPSSFTYICEKNGN 366
Query: 372 SLSDKMDELACFAPGMLALGASGYEETEKAEEIMNLAKELARTCYNFYQTTPTKLAGENY 431
+L DKMDELACFAPGMLALGASGY E+ ++ ++LA ELA TCYNFYQ+TPTKLAGENY
Sbjct: 367 NLIDKMDELACFAPGMLALGASGYGPDEE-KKFLSLAGELAWTCYNFYQSTPTKLAGENY 425
Query: 432 FFHTGQDMNVGTSWNILRPETVESLMYLWRLTGNKTYQDWGWDIFQAFEKNSRIESGYVG 491
FF GQDM+VGTSWNILRPETVESL YLWRLTGNKTYQ+WGW+IFQAFEKNSR+ESGYVG
Sbjct: 426 FFTAGQDMSVGTSWNILRPETVESLFYLWRLTGNKTYQEWGWNIFQAFEKNSRVESGYVG 485
Query: 492 LRDVNTGEKDNMMQSFFLAETLKYLYLLFSPPSVISFDEWVFNTEAHPLRIVPLNDNSKA 551
L+DVNTG KDN MQSFFLAETLKYLYLLFSP SVIS DEWVFNTEAHPL+IV ND K
Sbjct: 486 LKDVNTGAKDNKMQSFFLAETLKYLYLLFSPSSVISLDEWVFNTEAHPLKIVARNDPRK- 544
Query: 552 HSVGIATPTVRPFGRKQGKQ 571
PT+ RK G Q
Sbjct: 545 -------PTIALRQRKFGHQ 557
>AT3G21160.1 | chr3:7414129-7418328 REVERSE LENGTH=573
Length = 572
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/562 (69%), Positives = 452/562 (80%), Gaps = 9/562 (1%)
Query: 13 GAWRYLNPAYYLKRPKRXXXXXXXXXXXXXXXWDRQSLVREYESEISRLDDKVNQLRDQL 72
G W+Y NPA+YL+RP+R WDRQSL R+Y+ E+S+L+++V +L+ L
Sbjct: 12 GIWKYFNPAFYLRRPRRLALLIILFVSVSMVVWDRQSLSRDYQFEVSKLNEEVLRLQQML 71
Query: 73 RKAGVHLDENPTGD-KVSREKLVEIDPINNERREKVKEAMAHAWNSYVKYAWGMDELQPQ 131
+ ++ T D V+ K V+ DP++ +R ++VKEAM HAW+SY KYAWG DELQPQ
Sbjct: 72 EEI-----KSVTEDVSVNSLKDVQEDPVDAQRMQRVKEAMVHAWSSYEKYAWGQDELQPQ 126
Query: 132 SKNGVNSFGGLGATLVDSLDTLYIMGLKDEFQRARDWVADSLSFDKDYDASVFETTIRVV 191
+K+GV+SFGGLGAT++D+LDTLYIMGL ++FQ+AR+WVA SL FDKDY AS+FETTIRVV
Sbjct: 127 TKDGVDSFGGLGATMIDALDTLYIMGLDEQFQKAREWVASSLDFDKDYAASMFETTIRVV 186
Query: 192 GGLLSAYDLSGDKVFLEKAKDITDRLLPAWDTPSGIPYNRINLAHGRAHNPGWTNGDSIL 251
GGLLSAYDLSGDK+FLEKA DI DRLLPAWDT SGIPYN INL HG AHNP W GDSIL
Sbjct: 187 GGLLSAYDLSGDKIFLEKAMDIADRLLPAWDTQSGIPYNIINLKHGNAHNPTWAGGDSIL 246
Query: 252 ADSGTEQLEFIALSQRTGDPKYQQKAENVIRQLQKIYPSDGLLPIYINPHSGTASYSTIT 311
ADSGTEQLEFIALSQRTGDPKYQQK E VI L K +P+DGLLPIYINP + S STIT
Sbjct: 247 ADSGTEQLEFIALSQRTGDPKYQQKVEKVISVLNKNFPADGLLPIYINPDTANPSQSTIT 306
Query: 312 FGAMGDSFYEYLLKVWVQGNKTEHVKHYRQMWETSMEGLLSLTKKTTPSNYYYICEKNGG 371
FGAMGDSFYEYLLKVWV GNKT VKHYR MWE SM GLLSL KK+TP ++ YICEK+G
Sbjct: 307 FGAMGDSFYEYLLKVWVFGNKTSAVKHYRDMWEKSMNGLLSLVKKSTPLSFTYICEKSGN 366
Query: 372 SLSDKMDELACFAPGMLALGASGYEETEKAEEIMNLAKELARTCYNFYQTTPTKLAGENY 431
SL DKMDELACFAPGMLALGASGY + + ++ + LA+ELA TCYNFYQ+TPTKLAGENY
Sbjct: 367 SLIDKMDELACFAPGMLALGASGYSDPAEGKKFLTLAEELAWTCYNFYQSTPTKLAGENY 426
Query: 432 FFHTGQDMNVGTSWNILRPETVESLMYLWRLTGNKTYQDWGWDIFQAFEKNSRIESGYVG 491
FF++G DM+VGTSWNILRPETVESL YLWRLTGNKTYQ+WGW+IF+AFEKNSRIESGYVG
Sbjct: 427 FFNSGSDMSVGTSWNILRPETVESLFYLWRLTGNKTYQEWGWNIFEAFEKNSRIESGYVG 486
Query: 492 LRDVNTGEKDNMMQSFFLAETLKYLYLLFSPPSVISFDEWVFNTEAHPLRIVPLNDN--- 548
L+DVNTG KDN MQSFFLAETLKYLYLLFSP +VI DEWVFNTEAHPL+I ND
Sbjct: 487 LKDVNTGVKDNKMQSFFLAETLKYLYLLFSPTTVIPLDEWVFNTEAHPLKIKSRNDQVNL 546
Query: 549 SKAHSVGIATPTVRPFGRKQGK 570
+++ V + P R R G+
Sbjct: 547 KQSNKVLLRKPAFRIRQRHYGR 568
>AT1G30000.1 | chr1:10509532-10512320 REVERSE LENGTH=625
Length = 624
Score = 343 bits (880), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 212/502 (42%), Positives = 288/502 (57%), Gaps = 59/502 (11%)
Query: 97 DPINNERREKVKEAMAHAWNSYVKYAWGMDELQPQSKNGVNSFGGLGATLVDSLDTLYIM 156
DP R++ VKEA HAW+ Y KYA G DEL P S+ GV+ GGLGAT+VD+LDT IM
Sbjct: 122 DPKWAARQQSVKEAFDHAWSGYRKYAMGYDELMPISQKGVDGLGGLGATVVDALDTAMIM 181
Query: 157 GLKDEFQRARDWVADSL--SFDKDYDASVFETTIRVVGGLLSAYDLSGDK---------- 204
GL + A WV L + ++FETTIRV+GGLLSAY LSG +
Sbjct: 182 GLDNIVSEAGSWVETHLLERISQKGQVNLFETTIRVLGGLLSAYHLSGGEQGTVNMTHVG 241
Query: 205 ----VFLEKAKDITDRLLPAW-DTPSGIPYNRINLAHGRAH-NPGWTNGDSILADSGTEQ 258
++L AKD+ DRLL A+ +P+ +P+ + L AH PG G S A+ + Q
Sbjct: 242 PKPVIYLNIAKDLADRLLSAFTSSPTPVPFCDVILHESTAHPAPG---GASSTAEVASVQ 298
Query: 259 LEFIALSQRTGDPKYQQKAENVIRQLQKIYPSDGLLPIYINPHSGTASYSTITFGAMGDS 318
LEF LS +GDPKY +A V+ ++ + ++GL+PIYI+P +G I G+ GDS
Sbjct: 299 LEFNYLSSISGDPKYSTEAMKVLAHIKTLPKTEGLVPIYISPQTGDFVGENIRLGSRGDS 358
Query: 319 FYEYLLKVWV-QGNK-TEHVKHYRQMWETSMEGLLS-LTKKTTPSNYYYICE---KNGGS 372
+YEYL+KVW+ QG K + + M+ +M+G+ L + + P ++ E + G
Sbjct: 359 YYEYLIKVWLQQGAKLNSNFTYLHDMYIEAMKGVRHLLVQNSIPKGLVFVGELPYGSKGE 418
Query: 373 LSDKMDELACFAPGMLALGASGYEETEKA----------EEIMNLAKELARTCYNFYQTT 422
S KMD L CF PG LALGA+ E+A E + LA++LA+TC+ Y+ T
Sbjct: 419 FSPKMDHLVCFLPGTLALGATKGLTKEQALKENLLSFEDLENLKLAEDLAKTCFEMYEVT 478
Query: 423 PTKLAGENYFFHT------GQDMNVGTSW-------------NILRPETVESLMYLWRLT 463
T LA E +FHT G D +S N+LRPETVESL L+R+T
Sbjct: 479 ATGLAPEIAYFHTKDYTEDGLDGGNKSSMYANDIIIKPADRHNLLRPETVESLFVLYRIT 538
Query: 464 GNKTYQDWGWDIFQAFEKNSRIES-GYVGLRDVN--TGEKDNMMQSFFLAETLKYLYLLF 520
+ Y+D GW IF+AFEK ++++S GY L DV + + M++FFL ETLKYLYLLF
Sbjct: 539 KDTKYRDQGWQIFEAFEKYTKVKSGGYTSLDDVTEVPPHRRDKMETFFLGETLKYLYLLF 598
Query: 521 SPPSVISFDEWVFNTEAHPLRI 542
SVI D++VFNTEAHPL I
Sbjct: 599 GDDSVIPLDKFVFNTEAHPLPI 620
>AT5G43710.1 | chr5:17552252-17556523 REVERSE LENGTH=625
Length = 624
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/474 (30%), Positives = 237/474 (50%), Gaps = 50/474 (10%)
Query: 102 ERREKVKEAMAHAWNSYVKYAWGMDELQPQSKNGVNSFGGLGATLVDSLDTLYIMGLKDE 161
+ R++V+ HA++ Y+ A+ +DEL+P S G ++ GG TL+DSLDTL ++G ++
Sbjct: 39 QLRDEVRGMFYHAFDGYMNNAFPLDELRPLSCQGEDTLGGYALTLIDSLDTLALLGDRER 98
Query: 162 FQRARDWVADSLSFDKDYDASVFETTIRVVGGLLSAYDLSGDKV-----------FLEKA 210
F + +W+ +L F+ + SVFETTIRV+GGLLSA+ ++ D L A
Sbjct: 99 FTSSVEWIGKNLQFNINKTVSVFETTIRVLGGLLSAHLIASDYATGMRIPSYNNELLVLA 158
Query: 211 KDITDRLLPAWDTPSGIPYNRINLAHG-RAHNPGWTNGDSILADSGTEQLEFIALSQRTG 269
+++ R+LPA+DTP+GIP+ +NL +G H T+ A GT LEF LS+ T
Sbjct: 159 ENLARRMLPAFDTPTGIPFGSVNLMYGVDKHESKITS----TAGGGTLSLEFGVLSRLTN 214
Query: 270 DPKYQQKAENVIRQLQKIYPSDGLLPIYINPHSGTASYSTITFGAMGDSFYEYLLKVWVQ 329
DP ++Q A+N +R L + L+ +IN +G + G DSFYEYLLK ++
Sbjct: 215 DPVFEQVAKNAVRGLWARRSNLDLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYIL 274
Query: 330 GNKTEHVKHYRQMWETSMEGLLSLTKKTTPSNYYYICEKNGGSLSDKMDELACFAPGMLA 389
E++ +++ + ++M+ L P Y + + + + L F PG+
Sbjct: 275 FGDEEYLYIFQEAYRSAMQYL-----HKDPW-YVEVNMDSAAIVWPVFNSLQAFWPGLQV 328
Query: 390 LGASGYEETEKAEEIMNLAKELARTCYNFYQTTPTKLAGENYFFHTGQDMNVGTSWNILR 449
L ++ K T F T + G+ + LR
Sbjct: 329 LAGDVDPAIRTHTAFFSVWKRYGFTPEGFNLATLSVQYGQKSY--------------PLR 374
Query: 450 PETVESLMYLWRLTGNKTYQDWGWDIFQAFEKNSRIESGYVGLRDVNTGEKDNMMQSFFL 509
PE +ES +L++ T + Y D G D + + ++ GY + DV ++++ M+SFFL
Sbjct: 375 PELIESTYWLYKATRDPRYLDAGRDFVASLQYGAKCPCGYCHITDVELHKQEDHMESFFL 434
Query: 510 AETLKYLYLLFSPPSVISFD----------EWVFNTEAHPLRIVPLNDNSKAHS 553
AET+KYL+LLF ++ D +++F+TE H L I P ++ H
Sbjct: 435 AETVKYLWLLFD----LAVDSDNLVDNGPYKYIFSTEGHLLPITPQISLAREHC 484
>AT1G27520.1 | chr1:9558752-9562091 FORWARD LENGTH=575
Length = 574
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/478 (30%), Positives = 237/478 (49%), Gaps = 56/478 (11%)
Query: 95 EIDPINNERREKVKEAMAHAWNSYVKYAWGMDELQPQSKNGVNSFGGLG----------- 143
I+ + REKV+E HA+++Y+ YA+ DEL+P +K+ +S LG
Sbjct: 29 HIEVKKKQMREKVREMFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLKLEHLPTDY 88
Query: 144 ----ATLVDSLDTLYIMGLKDEFQRARDWVADSLSFDKDYDASVFETTIRVVGGLLSAYD 199
TLV+SL +L I+G EF++ W++++L+FD D ++FE IRV+GGL+SA+
Sbjct: 89 NGSAVTLVESLSSLAILGNSTEFEKGVLWLSENLTFDIDARVNLFECNIRVLGGLISAHL 148
Query: 200 LSGD-----------KVFLEKAKDITDRLLPAWDTPSGIPYNRINLAHGRAHNPGWTNGD 248
L+ D L A+D+ R LPA++TP+G+PY INL +G N +
Sbjct: 149 LAIDPNNRLIQGSYNNQLLRLAEDLGKRFLPAFETPTGLPYAWINLKNGVMEN---ETTE 205
Query: 249 SILADSGTEQLEFIALSQRTGDPKYQQKAENVIRQLQKIYPSDGLLPIYINPHSGTASYS 308
+ + G+ LE ALS+ TGDP+++ A +RQL ++ S LL ++ +G
Sbjct: 206 TSTSGCGSLVLEMGALSRLTGDPRFESAALRALRQLWRMRSSLDLLGTTLDVVTGEWIEY 265
Query: 309 TITFGAMGDSFYEYLLKVWVQGNKTEHVKHYRQMWETSMEGLLSLTKKTTPSNYYYICEK 368
+ + GA DSFYEYLLK ++ K ++ W L+ K +Y+ E
Sbjct: 266 SSSIGAGVDSFYEYLLKAYILFGKEDY-------WRMFHSAYLASQKYFRHGPWYH--EA 316
Query: 369 N---GGSLSDKMDELACFAPGMLALGASGYEETEKAEEIMNLAKELARTCYNFYQTTPTK 425
N G ++ L F PG+ L E ++ ++
Sbjct: 317 NMWSGKPTYWQLTSLQAFWPGLQVLVGDIAAANSSHREFFHVWEKFG------------- 363
Query: 426 LAGENYFFHTGQDMNVGTSWNILRPETVESLMYLWRLTGNKTYQDWGWDIFQAFEKNSRI 485
+ E Y Q ++ + LRPE ES YL++ T + Y D G + ++ +++
Sbjct: 364 VLPERYLL-DHQIIHPTMKYYPLRPELAESTFYLYQATKDPWYLDVGESMVKSLNLYTKV 422
Query: 486 ESGYVGLRDVNTGEKDNMMQSFFLAETLKYLYLLFSPPSVISFDEWVFNTEAHPLRIV 543
G+ +RDV T + ++ SFFLAET KYLYLLF S ++ ++F TE HP+++V
Sbjct: 423 PGGFASVRDVTTMQLEDHQHSFFLAETCKYLYLLFD-DSFVAKRNYIFTTEGHPIQVV 479
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.134 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,729,793
Number of extensions: 553813
Number of successful extensions: 1505
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1486
Number of HSP's successfully gapped: 6
Length of query: 572
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 468
Effective length of database: 8,255,305
Effective search space: 3863482740
Effective search space used: 3863482740
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)