BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0144900 Os05g0144900|AK064563
(227 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0144900 Similar to Sucrose-phosphatase (EC 3.1.3.24) 472 e-133
Os02g0143100 Similar to Sucrose-phosphatase (EC 3.1.3.24) 304 3e-83
Os01g0376700 Similar to Sucrose-phosphatase (EC 3.1.3.24) 301 2e-82
>Os05g0144900 Similar to Sucrose-phosphatase (EC 3.1.3.24)
Length = 227
Score = 472 bits (1214), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/227 (100%), Positives = 227/227 (100%)
Query: 1 RSQGPHKVSFFVDKEGAREVMDSLPETLNRRGLDVKIIFSSGEALDVLPQGAGKGQALLY 60
RSQGPHKVSFFVDKEGAREVMDSLPETLNRRGLDVKIIFSSGEALDVLPQGAGKGQALLY
Sbjct: 1 RSQGPHKVSFFVDKEGAREVMDSLPETLNRRGLDVKIIFSSGEALDVLPQGAGKGQALLY 60
Query: 61 LLKKFNSDGKPPNSTLVCGDSGNDAELFSVPSVHGVMVSNAQEELLQWYEENARGNPMMI 120
LLKKFNSDGKPPNSTLVCGDSGNDAELFSVPSVHGVMVSNAQEELLQWYEENARGNPMMI
Sbjct: 61 LLKKFNSDGKPPNSTLVCGDSGNDAELFSVPSVHGVMVSNAQEELLQWYEENARGNPMMI 120
Query: 121 HATERCAAGIMQAIGHFNLGPNVSPRDLEFPYPKLDAIKPADVVVKFYVLYEKWRQGEVQ 180
HATERCAAGIMQAIGHFNLGPNVSPRDLEFPYPKLDAIKPADVVVKFYVLYEKWRQGEVQ
Sbjct: 121 HATERCAAGIMQAIGHFNLGPNVSPRDLEFPYPKLDAIKPADVVVKFYVLYEKWRQGEVQ 180
Query: 181 KAPFIIQYLKRITVSTFLSYILRITQSSFVHKPLFLKSIIPFVDCYS 227
KAPFIIQYLKRITVSTFLSYILRITQSSFVHKPLFLKSIIPFVDCYS
Sbjct: 181 KAPFIIQYLKRITVSTFLSYILRITQSSFVHKPLFLKSIIPFVDCYS 227
>Os02g0143100 Similar to Sucrose-phosphatase (EC 3.1.3.24)
Length = 423
Score = 304 bits (779), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 142/191 (74%), Positives = 162/191 (84%)
Query: 3 QGPHKVSFFVDKEGAREVMDSLPETLNRRGLDVKIIFSSGEALDVLPQGAGKGQALLYLL 62
Q PHKVSF+VDK+ A+EV+ SL E L +RGLDVKII+S G+ LDVLPQGAGKGQAL YLL
Sbjct: 125 QRPHKVSFYVDKKSAQEVIKSLSEKLEKRGLDVKIIYSGGQDLDVLPQGAGKGQALAYLL 184
Query: 63 KKFNSDGKPPNSTLVCGDSGNDAELFSVPSVHGVMVSNAQEELLQWYEENARGNPMMIHA 122
KK +S GKPPN+TL CGDSGNDAELFS+P VHGVMVSNAQEELLQWY ENA+ NP +IHA
Sbjct: 185 KKLSSCGKPPNNTLACGDSGNDAELFSIPGVHGVMVSNAQEELLQWYSENAKDNPKIIHA 244
Query: 123 TERCAAGIMQAIGHFNLGPNVSPRDLEFPYPKLDAIKPADVVVKFYVLYEKWRQGEVQKA 182
TERCAAGI+QAIGHF LGPNVSPRD++FPY K + +KP D VVKFYVLYEKWR+ EV K+
Sbjct: 245 TERCAAGIIQAIGHFKLGPNVSPRDVDFPYVKENPVKPTDAVVKFYVLYEKWRRAEVPKS 304
Query: 183 PFIIQYLKRIT 193
+ QY K IT
Sbjct: 305 DSVTQYFKNIT 315
>Os01g0376700 Similar to Sucrose-phosphatase (EC 3.1.3.24)
Length = 423
Score = 301 bits (772), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 141/191 (73%), Positives = 162/191 (84%)
Query: 3 QGPHKVSFFVDKEGAREVMDSLPETLNRRGLDVKIIFSSGEALDVLPQGAGKGQALLYLL 62
Q PHKVSFFVDK+ A+EV+ SL + + GLDVKII+S G+ LD+LPQGAGKGQAL YLL
Sbjct: 125 QRPHKVSFFVDKKSAQEVIKSLSGNMEKCGLDVKIIYSGGQDLDILPQGAGKGQALAYLL 184
Query: 63 KKFNSDGKPPNSTLVCGDSGNDAELFSVPSVHGVMVSNAQEELLQWYEENARGNPMMIHA 122
KK +S GKPPN+TLVCGDSGNDAELFS+P VHGVMVSNAQEELLQWY ENA+GNP +IHA
Sbjct: 185 KKLSSCGKPPNNTLVCGDSGNDAELFSIPGVHGVMVSNAQEELLQWYAENAKGNPKIIHA 244
Query: 123 TERCAAGIMQAIGHFNLGPNVSPRDLEFPYPKLDAIKPADVVVKFYVLYEKWRQGEVQKA 182
TERCAAGI++AIGHF LGP+VSPRD+ FPY K D IKP D VVKFYVLYEKWR+ EV K+
Sbjct: 245 TERCAAGIIEAIGHFKLGPSVSPRDVGFPYVKEDHIKPTDAVVKFYVLYEKWRRAEVPKS 304
Query: 183 PFIIQYLKRIT 193
++QY K IT
Sbjct: 305 DSVVQYFKNIT 315
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.138 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,222,336
Number of extensions: 358503
Number of successful extensions: 630
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 630
Number of HSP's successfully gapped: 3
Length of query: 227
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 130
Effective length of database: 11,971,043
Effective search space: 1556235590
Effective search space used: 1556235590
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)