Os02g0143100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sucrose-phosphatase (EC 3.1.3.24).
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Os02g0143100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sucrose-phosphatase (EC 3.1.3.24).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.83 | 0.381 | 11.9 | -0.943 | 0.199 | -0.139 | -0.562 | -6.35 | -0.441 | 3.86 | 29.8 | 4258 | -- | -- |
| 74.94 | 0.403 | 11.9 | -1.92 | 0.129 | -0.623 | -1.06 | -- | -0.355 | 3.68 | 31.5 | 5720 | -- | -- |
| 66.23 | 0.379 | 11.9 | -1.01 | 0.232 | -0.188 | -- | -5.75 | -0.441 | 5.34 | 29.88 | 4479 | -- | -- |
| 68.77 | 0.386 | 12 | -2.01 | 0.212 | -0.696 | -- | -- | -0.576 | 5.07 | 29.88 | 5811 | -- | -- |
| 68.86 | 0.386 | 11.9 | -0.96 | -- | -0.177 | -- | -6.24 | -0.434 | -- | 29.83 | 4260 | -- | -- |
| 96.88 | 0.461 | 12 | -1.84 | 0.277 | -- | -0.358 | -- | -0.628 | 4.12 | -- | -- | -- | -- |
| 97.16 | 0.462 | 12 | -1.84 | 0.281 | -- | -- | -- | -0.626 | 4.62 | -- | -- | -- | -- |
| 71.31 | 0.393 | 12 | -2.06 | -- | -0.731 | -- | -- | -0.562 | -- | 29.68 | 5785 | -- | -- |
| 176.93 | 0.62 | 11.9 | -- | 0.223 | -0.495 | -- | -- | -0.312 | 4.99 | 30.6 | 4370 | -- | -- |
| 101.36 | 0.47 | 12 | -1.83 | -- | -- | -- | -- | -0.619 | -- | -- | -- | -- | -- |
| 186.24 | 0.638 | 12 | -- | 0.247 | -- | -- | -- | -0.422 | 4.82 | -- | -- | -- | -- |
| 179.26 | 0.624 | 11.9 | -- | -- | -0.526 | -- | -- | -0.309 | -- | 30.71 | 4132 | -- | -- |
| 189.47 | 0.642 | 12 | -- | -- | -- | -- | -- | -0.416 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.95 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 17 | 64.35 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 19 | 64.51 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 21 | 64.53 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 20 | 16 |
| 24 | 64.56 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 22 | 14 |
| 25 | 64.57 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 8 |
| 26 | 64.57 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 2 | 10 |
| 27 | 64.58 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 7 | 5 |
| 37 | 64.70 | temperature | 30.0 | 4320 | < th | dose independent | sin | 8 | NA |
| 120 | 64.90 | temperature | 30.0 | 4320 | > th | dose independent | sin | 8 | NA |
| 121 | 64.91 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 17 | 21 |
| 130 | 64.97 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 160 | 65.11 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 292 | 65.54 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 9 |
| 326 | 65.74 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 9 | 9 |
| 329 | 65.74 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 334 | 65.76 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 20 | 22 |
| 336 | 65.77 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 14 |
| 340 | 65.77 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 22 | 20 |
| 465 | 65.93 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 9 | 14 |
| 467 | 65.93 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 9 | 21 |
| 469 | 65.94 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 9 | 12 |
| 486 | 65.96 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 19 |
| 494 | 65.97 | temperature | 30.0 | 4320 | < th | dose independent | no | NA | NA |
| 499 | 65.97 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 17 |
| 525 | 65.97 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 22 | 23 |
| 595 | 65.99 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 621 | 66.05 | temperature | 30.0 | 4320 | > th | dose independent | no | NA | NA |
| 733 | 66.07 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 7 | NA |
| 772 | 66.11 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 23 |
| 926 | 66.49 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 20 | 13 |