BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0143100 Os02g0143100|AK063330
(423 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G35840.1 | chr2:15053952-15055776 FORWARD LENGTH=423 565 e-161
AT1G51420.1 | chr1:19064852-19066704 REVERSE LENGTH=424 492 e-139
AT3G52340.1 | chr3:19407412-19409182 FORWARD LENGTH=424 468 e-132
AT3G54270.1 | chr3:20087419-20089735 REVERSE LENGTH=426 426 e-119
>AT2G35840.1 | chr2:15053952-15055776 FORWARD LENGTH=423
Length = 422
Score = 565 bits (1455), Expect = e-161, Method: Compositional matrix adjust.
Identities = 276/421 (65%), Positives = 319/421 (75%), Gaps = 3/421 (0%)
Query: 1 MDKLNGSARLMIVSDLDHTMVDHHDEENLSLLRFGALWESVYCQDSLLVFSTGRSPTLYM 60
M++L RLMIVSDLDHTMVDHHD ENLSLLRF +LWE Y DSLLVFSTGRSPTLY
Sbjct: 1 MERLTSPPRLMIVSDLDHTMVDHHDPENLSLLRFNSLWEHAYRHDSLLVFSTGRSPTLYK 60
Query: 61 ELRKEKPMLTPDITIMSVGTEITYGEEMVPDDGWVEYLNNKWDRNIVVEETANVSELKLQ 120
ELRKEKP+LTPDITIMSVGTEITYG MVPD GWVE LNNKWD IV +E +N ELKLQ
Sbjct: 61 ELRKEKPLLTPDITIMSVGTEITYGNSMVPDHGWVEALNNKWDLGIVKQEASNFPELKLQ 120
Query: 121 VESEQRPHKVSFYVDKKSAQEVIKSLSEKLEKRGLDVKIIYSGGQDLDVLPQGAGKGQAL 180
E+EQRPHKVSFYV+K AQEV K LS++ KRGLDVKIIYSGG DLD+LPQGAGKGQAL
Sbjct: 121 AETEQRPHKVSFYVEKSKAQEVTKELSQRFLKRGLDVKIIYSGGMDLDILPQGAGKGQAL 180
Query: 181 AYLLKKLSSCGKPPNNTLACGDSGNDAELFSIPGVHGVMVSNAQEELLQWYSENAKDNPK 240
AYLLKKL + GK P NTLACGDSGNDAELFSIP V+GVMVSNAQEELL+W++ENAKDNPK
Sbjct: 181 AYLLKKLKTEGKLPVNTLACGDSGNDAELFSIPDVYGVMVSNAQEELLKWHAENAKDNPK 240
Query: 241 IIHATERCAAGIIQAIGHFKLGPNVSPRDV-DFPYVKENPVKPTDAVVKFYVLYEKWRRA 299
+IHA ERCA GIIQAIGHFKLGPN+SPRDV DF +K V P VVKF++ YE+WRR
Sbjct: 241 VIHAKERCAGGIIQAIGHFKLGPNLSPRDVSDFLEIKVENVNPGHEVVKFFLFYERWRRG 300
Query: 300 EVPKSDSVTQYFKNITHANGVIIHPAGLECSLHASIDALGSCYGDKQGKKYRAWVDRLVV 359
EV S++ T K H GV +HP+G E SL +ID L +GDKQGKK+R W D+++
Sbjct: 301 EVENSEAYTASLKASVHPGGVFVHPSGTEKSLRDTIDELRKYHGDKQGKKFRVWADQVLA 360
Query: 360 SQCGSEGWLVRFNLWELEGDVWSCCLTSLALNAKPETPEGFVVTHIHKTWLKGYSSADEQ 419
+ W+V+ + WE +GD CC T++ +K EG V H+ +TW K D+
Sbjct: 361 TDTTPGTWIVKLDKWEQDGDERRCCTTTVKFTSK--EGEGLVWEHVQQTWSKETMVKDDS 418
Query: 420 S 420
S
Sbjct: 419 S 419
>AT1G51420.1 | chr1:19064852-19066704 REVERSE LENGTH=424
Length = 423
Score = 492 bits (1266), Expect = e-139, Method: Compositional matrix adjust.
Identities = 250/411 (60%), Positives = 298/411 (72%), Gaps = 4/411 (0%)
Query: 1 MDKLNGSARLMIVSDLDHTMVDHH-DEENLSLLRFGALWESVYCQDSLLVFSTGRSPTLY 59
M++L RLMIVSDLD TMVDHH D ENL+LLRF +LWE Y DSLLVFSTGR+ T+Y
Sbjct: 1 MERLTSPPRLMIVSDLDETMVDHHKDPENLALLRFNSLWEDAYRHDSLLVFSTGRAQTMY 60
Query: 60 MELRKEKPMLTPDITIMSVGTEITYGEEMVPDDGWVEYLNNKWDRNIVVEETANVSELKL 119
+LRKEKP+LTPD+ I SVGTEI YG MVPDD WVE LN KWDR IV EET+ EL L
Sbjct: 61 KKLRKEKPLLTPDVIITSVGTEIAYGNSMVPDDNWVEILNKKWDRGIVQEETSKFPELTL 120
Query: 120 QVESEQRPHKVSFYVDKKSAQEVIKSLSEKLEKRGLDVKIIYSGGQDLDVLPQGAGKGQA 179
Q E+EQRPHK+SF +DK + V K LS +LEKRG+DVK I+SGG DVL +G GKGQA
Sbjct: 121 QGETEQRPHKLSFNIDKSKVKAVTKELSPRLEKRGVDVKFIFSGGNAFDVLAKGGGKGQA 180
Query: 180 LAYLLKKLSSCGKPPNNTLACGDSGNDAELFSIPGVHGVMVSNAQEELLQWYSENAKDNP 239
LAYLLKKL + GK P NTLACGDSGND ELF+IP V+GVMVSNAQEELL+WY+ENAKDN
Sbjct: 181 LAYLLKKLKTEGKLPINTLACGDSGNDTELFTIPNVYGVMVSNAQEELLEWYAENAKDNA 240
Query: 240 KIIHATERCAAGIIQAIGHFKLGPNVSPRDV-DFPYVKENPVKPTDAVVKFYVLYEKWRR 298
IIHA+ERCA GI QAIGHFKLGPN+SPRDV DF K + V P VVKF++ YE+WRR
Sbjct: 241 NIIHASERCAGGITQAIGHFKLGPNLSPRDVSDFLECKADNVNPGHEVVKFFLFYERWRR 300
Query: 299 AEVPKSDSVTQYFKNITHANGVIIHPAGLECSLHASIDALGSCYGDKQGKKYRAWVDRLV 358
EV + T K H +GV +HP+G E SL +ID LG YGDK+GKK+R W D+++
Sbjct: 301 GEVENCTTYTSSLKASCHPSGVFVHPSGAEKSLRDTIDELGKYYGDKKGKKFRVWTDQVL 360
Query: 359 VSQCGSEGWLVRFNLWELEGDVWSCCLTSLALNAKPETPEGFVVTHIHKTW 409
+ W+V+ + WE GD CC T++ +K EGFV H+ + W
Sbjct: 361 ATDTTPGTWIVKLDKWEQTGDERKCCTTTVKFTSKE--GEGFVWEHVQQIW 409
>AT3G52340.1 | chr3:19407412-19409182 FORWARD LENGTH=424
Length = 423
Score = 468 bits (1205), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/395 (59%), Positives = 291/395 (73%), Gaps = 2/395 (0%)
Query: 1 MDKLNGSARLMIVSDLDHTMVDHHDEENLSLLRFGALWESVYCQDSLLVFSTGRSPTLYM 60
M++L LMIVSDLDHTMVDH D ENLSLLRF +LWE Y +DSLLVFST RSP LY
Sbjct: 1 MERLISHPPLMIVSDLDHTMVDHQDHENLSLLRFNSLWEYAYRRDSLLVFSTARSPVLYK 60
Query: 61 ELRKEKPMLTPDITIMSVGTEITYGEEMVPDDGWVEYLNN-KWDRNIVVEETANVSELKL 119
ELRKEKP+LTPDI I S+GTEI +G MVPD WVE LN+ KW+R IV+EET+ EL L
Sbjct: 61 ELRKEKPLLTPDIIITSIGTEIAFGNSMVPDHAWVESLNSCKWNREIVLEETSKFPELTL 120
Query: 120 QVESEQRPHKVSFYVDKKSAQEVIKSLSEKLEKRGLDVKIIYSGGQDLDVLPQGAGKGQA 179
Q ++EQR HKVSFY+D+ + + K LS+ LEKRGLDVKIIYS G+++DV+P+GAGKG+A
Sbjct: 121 QPKTEQRLHKVSFYIDEGKGEALTKELSQLLEKRGLDVKIIYSWGKNVDVIPRGAGKGEA 180
Query: 180 LAYLLKKLSSCGKPPNNTLACGDSGNDAELFSIPGVHGVMVSNAQEELLQWYSENAKDNP 239
L YLLKKL + G P NTLACGDS +DAELFSIP VHGVMVSN+QEELL+W SENA +N
Sbjct: 181 LEYLLKKLQAEGIFPVNTLACGDSEHDAELFSIPDVHGVMVSNSQEELLKWRSENALNNL 240
Query: 240 KIIHATERCAAGIIQAIGHFKLGPNVSPRDV-DFPYVKENPVKPTDAVVKFYVLYEKWRR 298
K+IH+TERCA GIIQAIGHF LGP++SPRDV +F K + V P VV+FY+ YE+ RR
Sbjct: 241 KVIHSTERCADGIIQAIGHFNLGPDLSPRDVSEFLDRKMDNVNPGHEVVRFYLFYERLRR 300
Query: 299 AEVPKSDSVTQYFKNITHANGVIIHPAGLECSLHASIDALGSCYGDKQGKKYRAWVDRLV 358
E+ ++ FK+ V+ HP+G E SL +ID L CYGDK+GKK+ WVD+++
Sbjct: 301 GEIKNYETYIASFKDSCLHAAVLFHPSGAEKSLRDTIDELKKCYGDKRGKKFWVWVDQVL 360
Query: 359 VSQCGSEGWLVRFNLWELEGDVWSCCLTSLALNAK 393
V+ W+V+F+ WE D CC T++ +K
Sbjct: 361 VTDTIPGKWIVKFDKWEQCEDESQCCKTTVEFTSK 395
>AT3G54270.1 | chr3:20087419-20089735 REVERSE LENGTH=426
Length = 425
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/423 (52%), Positives = 286/423 (67%), Gaps = 6/423 (1%)
Query: 1 MDKLNGSARLMIVSDLDHTMVDHHDEENLSLLRFGALWESVYCQDSLLVFSTGRSPTLYM 60
MD+L G RL++V+DLD T+VDH D EN LLRF ALWE+ Y DSLLV+ TGRS + Y
Sbjct: 1 MDRLEGPPRLILVADLDCTLVDHDDPENNDLLRFNALWEAHYRHDSLLVYCTGRSFSSYS 60
Query: 61 ELRKEKPMLTPDITIMSVGTEITYG--EEMVPDDGWVEYLNNKWDRNIVVEETANVSELK 118
LRK++P+LTPDI + SVG+EI YG E V D W L+ KW+R+IVVEET +L+
Sbjct: 61 SLRKKRPLLTPDIAVTSVGSEIVYGGGESTVSDVVWTARLDYKWNRDIVVEETLKFPKLE 120
Query: 119 LQVESEQRPHKVSFYVDKKSAQEVIKSLSEKLEKRGLDVKIIYSGGQDLDVLPQGAGKGQ 178
Q + Q HKVSF+V ++ A E++K L LE+RG+DVK++YS G DVLP+GAGK
Sbjct: 121 PQPDKSQEEHKVSFFVGREDAVEIMKVLPGILEERGVDVKLVYSNGYAFDVLPRGAGKQG 180
Query: 179 ALAYLLKKLSSCGKPPNNTLACGDSGNDAELFSIPGVHGVMVSNAQEELLQWYSENAKDN 238
AL YLL KL GK P+NTL CGDSGNDAELF+I V+GVMVSN+ EELLQWY ENAKDN
Sbjct: 181 ALTYLLDKLDIEGKQPSNTLVCGDSGNDAELFNISDVYGVMVSNSHEELLQWYEENAKDN 240
Query: 239 PKIIHATERCAAGIIQAIGHFKLGPNVSPRDV-DFPYVKENPVKPTDAVVKFYVLYEKWR 297
PKI HA+ERC AG+I+AI F LGPNVSPRDV D + P VV+FY+ YE+WR
Sbjct: 241 PKIFHASERCGAGMIEAIQRFNLGPNVSPRDVMDTENFHGESLNPAHEVVQFYLFYERWR 300
Query: 298 RAEVPKSDSVTQYFKNITHANGVIIHPAGLECSLHASIDALGSCYGDKQGKKYRAWVDRL 357
EV KSD Q K+++ G+ +HP+G+E +H ID + + YGD + KK+R W+D +
Sbjct: 301 CGEVEKSDKYLQNLKSLSSPLGIFVHPSGVEKPIHEWIDEMENLYGDGKEKKFRIWLDNV 360
Query: 358 VVSQCGSEGWLVRFNLWEL-EGDVWSCCLTSLALNAKPETPEGFVVTHIHKTWLKGYSSA 416
S S+ WL +F EL EG V SC T + L+ K E + HIH++WL SS
Sbjct: 361 TSSHISSDTWLAKFVKHELSEGKVRSCS-TKVLLSYKEEK-QRLTWMHIHQSWLDESSSD 418
Query: 417 DEQ 419
D++
Sbjct: 419 DQE 421
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.133 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,136,027
Number of extensions: 450901
Number of successful extensions: 1114
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1111
Number of HSP's successfully gapped: 4
Length of query: 423
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 322
Effective length of database: 8,337,553
Effective search space: 2684692066
Effective search space used: 2684692066
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)