Os05g0144900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sucrose-phosphatase (EC 3.1.3.24).
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Os05g0144900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sucrose-phosphatase (EC 3.1.3.24).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 220.98 | 0.698 | 6.03 | -2.4 | 1.51 | -0.771 | 0.229 | -3.69 | -0.406 | 3.28 | 66.26 | 7277 | -- | -- |
| 235.53 | 0.715 | 6.04 | -2.36 | 1.51 | -0.567 | -0.00799 | -- | -0.377 | 3.21 | 54.66 | 7321 | -- | -- |
| 221.15 | 0.693 | 6.03 | -2.41 | 1.51 | -0.767 | -- | -3.69 | -0.407 | 3.28 | 66.33 | 7270 | -- | -- |
| 228.27 | 0.704 | 6 | -2.16 | 1.46 | -1.06 | -- | -- | -0.444 | 3.33 | 51.17 | 7057 | -- | -- |
| 346.87 | 0.867 | 6.04 | -2.33 | -- | -0.903 | -- | -3.05 | -0.39 | -- | 62.86 | 7534 | -- | -- |
| 249.58 | 0.741 | 6.04 | -2.46 | 1.48 | -- | 0.085 | -- | -0.404 | 3.29 | -- | -- | -- | -- |
| 249.6 | 0.74 | 6.04 | -2.46 | 1.48 | -- | -- | -- | -0.405 | 3.29 | -- | -- | -- | -- |
| 348.55 | 0.87 | 6.06 | -2.04 | -- | -1.27 | -- | -- | -0.399 | -- | 52 | 7530 | -- | -- |
| 325.65 | 0.84 | 6.01 | -- | 1.46 | -2.19 | -- | -- | -0.285 | 3.3 | 51 | 7058 | -- | -- |
| 374.14 | 0.904 | 6.04 | -2.4 | -- | -- | -- | -- | -0.366 | -- | -- | -- | -- | -- |
| 408.99 | 0.946 | 5.98 | -- | 1.44 | -- | -- | -- | -0.131 | 3.29 | -- | -- | -- | -- |
| 442.45 | 0.98 | 6 | -- | -- | -2.21 | -- | -- | -0.243 | -- | 51 | 7506 | -- | -- |
| 525.6 | 1.07 | 5.98 | -- | -- | -- | -- | -- | -0.1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 211.18 | humidity | 60 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 4 | 214.48 | wind | 1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 5 | 214.57 | wind | 5 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 6 | 214.61 | wind | 3 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 12 | 214.77 | wind | 7 | 14400 | < th | dose dependent | rect. | 3 | 5 |
| 17 | 214.84 | wind | 3 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 20 | 214.92 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 24 | 215.03 | wind | 3 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 25 | 215.07 | wind | 3 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 31 | 215.21 | wind | 9 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 34 | 215.24 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 58 | 215.77 | wind | 5 | 14400 | < th | dose dependent | rect. | 1 | 7 |
| 73 | 215.97 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 102 | 216.34 | wind | 9 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 119 | 216.48 | humidity | 60 | 14400 | < th | dose dependent | rect. | 20 | 21 |
| 120 | 216.49 | humidity | 60 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 165 | 216.73 | humidity | 60 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 173 | 216.86 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 180 | 216.95 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 193 | 217.10 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 198 | 217.16 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 200 | 217.18 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 202 | 217.18 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 203 | 217.18 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 207 | 217.19 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 235 | 217.27 | humidity | 60 | 14400 | < th | dose dependent | sin | 23 | NA |
| 250 | 217.32 | humidity | 60 | 14400 | < th | dose dependent | rect. | 13 | 23 |
| 254 | 217.35 | wind | 3 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 278 | 217.47 | humidity | 60 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 290 | 217.55 | humidity | 60 | 14400 | < th | dose dependent | rect. | 9 | 23 |
| 308 | 217.60 | humidity | 60 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 353 | 217.65 | wind | 3 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 372 | 217.78 | humidity | 60 | 14400 | < th | dose dependent | no | NA | NA |
| 492 | 217.96 | humidity | 60 | 14400 | < th | dose independent | rect. | 20 | 16 |
| 502 | 218.03 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 511 | 218.03 | humidity | 60 | 14400 | < th | dose independent | rect. | 14 | 22 |
| 571 | 218.36 | humidity | 70 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 579 | 218.40 | humidity | 80 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 647 | 218.69 | humidity | 70 | 14400 | < th | dose dependent | rect. | 21 | 13 |
| 652 | 218.72 | wind | 9 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 658 | 218.74 | humidity | 50 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 659 | 218.74 | humidity | 90 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 669 | 218.80 | humidity | 70 | 14400 | < th | dose dependent | rect. | 6 | 4 |
| 684 | 218.84 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 701 | 218.88 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 15 |
| 717 | 218.98 | humidity | 60 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 734 | 219.05 | humidity | 60 | 14400 | > th | dose independent | rect. | 23 | 12 |
| 740 | 219.07 | humidity | 60 | 14400 | > th | dose independent | rect. | 15 | 20 |
| 806 | 219.44 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 820 | 219.50 | humidity | 90 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 846 | 219.60 | humidity | 80 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 889 | 219.76 | atmosphere | 1015 | 14400 | > th | dose dependent | sin | 19 | NA |
| 896 | 219.80 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 904 | 219.84 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 914 | 219.88 | humidity | 80 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 923 | 219.91 | wind | 3 | 14400 | < th | dose independent | sin | 8 | NA |
| 925 | 219.91 | wind | 9 | 14400 | < th | dose dependent | sin | 7 | NA |
| 930 | 219.93 | humidity | 60 | 14400 | < th | dose independent | sin | 7 | NA |
| 931 | 219.93 | humidity | 80 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 946 | 220.02 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 948 | 220.02 | wind | 1 | 14400 | > th | dose dependent | sin | 7 | NA |