BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0141000 Os05g0141000|Os05g0141000
(868 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0141000 Conserved hypothetical protein 1667 0.0
Os05g0141200 Conserved hypothetical protein 1166 0.0
Os01g0523500 283 4e-76
Os01g0522433 Armadillo-like helical domain containing protein 162 9e-40
Os01g0522800 Armadillo-like helical domain containing protein 129 6e-30
>Os05g0141000 Conserved hypothetical protein
Length = 868
Score = 1667 bits (4317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 816/868 (94%), Positives = 816/868 (94%)
Query: 1 MKLTAVQFIDRFLGGYEDPAQQIFLRAPEALMKYKRTSTLKGLSWWXXXXXXXXXXXXXX 60
MKLTAVQFIDRFLGGYEDPAQQIFLRAPEALMKYKRTSTLKGLSWW
Sbjct: 1 MKLTAVQFIDRFLGGYEDPAQQIFLRAPEALMKYKRTSTLKGLSWWRRRGTQQQQQEPTR 60
Query: 61 XXXXXXXHKEEKIWYLCSIYGCQALLGMTIXXXXXXXXXXXXXXXXXXSWKRLKKQDYLN 120
HKEEKIWYLCSIYGCQALLGMTI SWKRLKKQDYLN
Sbjct: 61 RTRGGRRHKEEKIWYLCSIYGCQALLGMTILAAVWLARVAAVVTVLALSWKRLKKQDYLN 120
Query: 121 PGDIMNDQNQNITWSLNIFYSLVFAQGIMFVTILLNPLSYYFLFNAGIKYKLFDPSGLKI 180
PGDIMNDQNQNITWSLNIFYSLVFAQGIMFVTILLNPLSYYFLFNAGIKYKLFDPSGLKI
Sbjct: 121 PGDIMNDQNQNITWSLNIFYSLVFAQGIMFVTILLNPLSYYFLFNAGIKYKLFDPSGLKI 180
Query: 181 ILNYKRCNYLEFIAGNVKATLQMHLVTFAKKLAVSNMADDKLLGVGAMDRILRSMEFRSL 240
ILNYKRCNYLEFIAGNVKATLQMHLVTFAKKLAVSNMADDKLLGVGAMDRILRSMEFRSL
Sbjct: 181 ILNYKRCNYLEFIAGNVKATLQMHLVTFAKKLAVSNMADDKLLGVGAMDRILRSMEFRSL 240
Query: 241 ALRKLRAFMEPDELGKLVNMLGYDKSHKNKTTEEEDIRGHTARVVLKLSPDLLVQSYPQI 300
ALRKLRAFMEPDELGKLVNMLGYDKSHKNKTTEEEDIRGHTARVVLKLSPDLLVQSYPQI
Sbjct: 241 ALRKLRAFMEPDELGKLVNMLGYDKSHKNKTTEEEDIRGHTARVVLKLSPDLLVQSYPQI 300
Query: 301 LYAIXXXXXXXXXXXXXRVCKCNMDSDLVWFGLRILDKLTDNPENCRKATNDESGGDLLS 360
LYAI RVCKCNMDSDLVWFGLRILDKLTDNPENCRKATNDESGGDLLS
Sbjct: 301 LYAISSSLLSTSKSNNKRVCKCNMDSDLVWFGLRILDKLTDNPENCRKATNDESGGDLLS 360
Query: 361 TIIDLTIPCCHGHGHGRSMRSNTSTISDSWIEQEIIPLLQTENEIPLPFIDKLDQEIIVG 420
TIIDLTIPCCHGHGHGRSMRSNTSTISDSWIEQEIIPLLQTENEIPLPFIDKLDQEIIVG
Sbjct: 361 TIIDLTIPCCHGHGHGRSMRSNTSTISDSWIEQEIIPLLQTENEIPLPFIDKLDQEIIVG 420
Query: 421 MALNILSKLVAAPDEAGEKLRKETSKHVHFLTNTGMILDHVQATRVISCLAVDKEGREYI 480
MALNILSKLVAAPDEAGEKLRKETSKHVHFLTNTGMILDHVQATRVISCLAVDKEGREYI
Sbjct: 421 MALNILSKLVAAPDEAGEKLRKETSKHVHFLTNTGMILDHVQATRVISCLAVDKEGREYI 480
Query: 481 GKFPEIIKKLKDCLLSKTPYVNITKVAAKLLVLECTGDEQLLNQIQLFIEENRTVEDQSF 540
GKFPEIIKKLKDCLLSKTPYVNITKVAAKLLVLECTGDEQLLNQIQLFIEENRTVEDQSF
Sbjct: 481 GKFPEIIKKLKDCLLSKTPYVNITKVAAKLLVLECTGDEQLLNQIQLFIEENRTVEDQSF 540
Query: 541 SLPISAFIEELDFDQLHQPWIWNFVQSLDVEDALFAPRVNHSDAAAKALILLTTECASNV 600
SLPISAFIEELDFDQLHQPWIWNFVQSLDVEDALFAPRVNHSDAAAKALILLTTECASNV
Sbjct: 541 SLPISAFIEELDFDQLHQPWIWNFVQSLDVEDALFAPRVNHSDAAAKALILLTTECASNV 600
Query: 601 EAFLQGINKEELNKIVNALSSEDGDKEKRRALAQFEGRRNLDPETLRRVKKIILAEGEEQ 660
EAFLQGINKEELNKIVNALSSEDGDKEKRRALAQFEGRRNLDPETLRRVKKIILAEGEEQ
Sbjct: 601 EAFLQGINKEELNKIVNALSSEDGDKEKRRALAQFEGRRNLDPETLRRVKKIILAEGEEQ 660
Query: 661 ATGPKEFDEYMKLIDAALPKVLKAVVDAVATLEDPSSAENLDHVKDDMWIKQGKVLESFI 720
ATGPKEFDEYMKLIDAALPKVLKAVVDAVATLEDPSSAENLDHVKDDMWIKQGKVLESFI
Sbjct: 661 ATGPKEFDEYMKLIDAALPKVLKAVVDAVATLEDPSSAENLDHVKDDMWIKQGKVLESFI 720
Query: 721 GLAVQICRSPNKRSDFSTALKYANLTADTLIKKLKKILEVYMSPSTDFPCIRVSTLELIT 780
GLAVQICRSPNKRSDFSTALKYANLTADTLIKKLKKILEVYMSPSTDFPCIRVSTLELIT
Sbjct: 721 GLAVQICRSPNKRSDFSTALKYANLTADTLIKKLKKILEVYMSPSTDFPCIRVSTLELIT 780
Query: 781 WMVEENNSYWEILLQCGVYEELNEVARTARKLESFKLFHCGIGIPTERTIECISSLATKL 840
WMVEENNSYWEILLQCGVYEELNEVARTARKLESFKLFHCGIGIPTERTIECISSLATKL
Sbjct: 781 WMVEENNSYWEILLQCGVYEELNEVARTARKLESFKLFHCGIGIPTERTIECISSLATKL 840
Query: 841 QEKLKKIPDFERRYRYGEHASRISVLIA 868
QEKLKKIPDFERRYRYGEHASRISVLIA
Sbjct: 841 QEKLKKIPDFERRYRYGEHASRISVLIA 868
>Os05g0141200 Conserved hypothetical protein
Length = 957
Score = 1166 bits (3016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/886 (69%), Positives = 688/886 (77%), Gaps = 37/886 (4%)
Query: 3 LTAVQFIDRF--LGGYEDPAQQIFLRAPEALMKYKRTSTL-KGLSWWXXXXXXXXXXXXX 59
+T + F+ LGGYEDPA QIFL APEAL+K + + SWW
Sbjct: 89 VTVIAFVQSIGILGGYEDPAHQIFLHAPEALIKNREAEAWERRKSWWRRRGTQQQQQQQP 148
Query: 60 XXXXXXXXHKEEKIWYLCSIYGCQALLGMTIXXXXXXXXXXXXXXXXXXSWKRLKKQDYL 119
+E+ + IYG QA LG+ I S KRL+KQDYL
Sbjct: 149 RGRPRRRKQEEKARKWCDDIYGFQAFLGIAIYVAMWLGKVAAVATCIALSSKRLEKQDYL 208
Query: 120 NPGDIMNDQNQNITWSLNIFYSLVFAQGIMFVTILLNPLSYYFLFNAGIKYKLFDPSGLK 179
GD +QNI WSLNIFYSLV AQGI+F+ +LLNPL+ YF+ KYKLF+PSGLK
Sbjct: 209 ESGDNEKGDHQNIRWSLNIFYSLVLAQGIIFICMLLNPLTVYFVLKVRRKYKLFEPSGLK 268
Query: 180 IILNYKRCNYLEFIAGNVKATLQMHLVTFAKKLAVSNMADDKLLGVGAMDRILRSMEFRS 239
II YK+ NYL FIAGNV+ATL MHLVTFAK LAVSN DD+L GV AMDRIL S+EFRS
Sbjct: 269 IIYRYKKYNYLGFIAGNVRATLNMHLVTFAKNLAVSNTIDDQLAGVRAMDRILMSVEFRS 328
Query: 240 LALRKLRAFMEPDELGKLVNMLGYDKSHKNKTTEEED--IRGHTARVVLKLSPDLLVQSY 297
LALR+LRA MEPD+LGKL++MLG+ T EEE IRGH ARVVLK SPDL++QSY
Sbjct: 329 LALRRLRASMEPDDLGKLIDMLGF-----VSTMEEEQNIIRGHAARVVLKFSPDLMLQSY 383
Query: 298 PQILYAIXXXXXXXXXXXXXRVCKCNMDSDLVWFGLRILDKLTDNPENCRKATNDESGGD 357
PQ + RVCKCNMDSDLVWFGL ILDKLTDNPENCRKA +D+S
Sbjct: 384 PQ---ILYLISSSLLSTSNKRVCKCNMDSDLVWFGLHILDKLTDNPENCRKAKDDDSDL- 439
Query: 358 LLSTIIDLTIPCCHGHGHGRSMRSNTSTISDSWIEQEIIPLLQTENEIPLPFIDKLDQEI 417
LL IIDL C GHGHG S+RSNT TISDSWIEQEIIPLLQ E++IPLPFI+K+DQEI
Sbjct: 440 LLPMIIDLANLC--GHGHGNSVRSNT-TISDSWIEQEIIPLLQKEDDIPLPFINKIDQEI 496
Query: 418 IVGMALNILSKLVAAPDEAGEKLRKETSKHVHFLTNTGMILDHVQATRVISCLAVDKEGR 477
IVGMALNILSKL+A P EAGEKLRKETSK +HFLTNTGMI++HV+ATRVISCLAVDKE R
Sbjct: 497 IVGMALNILSKLIAVPGEAGEKLRKETSKDLHFLTNTGMIMEHVEATRVISCLAVDKEAR 556
Query: 478 EYIGKFPEIIKKLKDCLLSKTPYVNITKVAAKLLVLECTGDEQLLNQIQLFIEENRTVED 537
+ IGK PEIIKKLKDCLLSKTPYVN+TKVAAKLL++E T E+LLN++ LFIEENRTVED
Sbjct: 557 QDIGKLPEIIKKLKDCLLSKTPYVNMTKVAAKLLLMEYTS-EELLNRVLLFIEENRTVED 615
Query: 538 QSFSLPISAFIEELDFDQLHQPWIWNFVQSLDVEDALFAPRVNHSDAAAKALILLTTECA 597
QSFSLPISAFIEEL DQL Q + VQ LD+ED L +PRVNHS+AAAKALILLTT C
Sbjct: 616 QSFSLPISAFIEELYLDQLPQ----SVVQRLDLEDVLSSPRVNHSEAAAKALILLTTGCE 671
Query: 598 SNVEAFLQGINKEELNKIVNALSSEDGDKEKRRALAQFEGRRNLDPETLRRVKKIILAEG 657
+NVEAFL+GIN++ELNKIVN LSSED DKEKRRALAQFEGR +LDPETLR VKKIILAEG
Sbjct: 672 NNVEAFLKGINEKELNKIVNVLSSEDRDKEKRRALAQFEGRHHLDPETLRIVKKIILAEG 731
Query: 658 EEQAT--------------GPKEFDEYMKLIDAALPKVLKAVVDAVATLEDPSSAENLDH 703
EEQ T GPKEFDEYMKLIDAALPKVLKAVVDAVATLEDPSS+ENL+H
Sbjct: 732 EEQETSMHAKLLQNLRAYSGPKEFDEYMKLIDAALPKVLKAVVDAVATLEDPSSSENLNH 791
Query: 704 VKDDMWIKQGKVLESFIGLAVQICRSPNKRSDFSTALKYANLTADTLIKKLKKILEVYMS 763
VKDD+WIKQGKVLESFIGLAVQICRSPN SDFSTALK ANLT T IKKLKKILEVY S
Sbjct: 792 VKDDLWIKQGKVLESFIGLAVQICRSPNATSDFSTALKDANLTVHTFIKKLKKILEVYRS 851
Query: 764 PSTDFPCIRVSTLELITWMVEENNSYWEILLQCGVYEELNEVARTARKLESFKLFHCGIG 823
PSTDFPCIRVSTLELITWMVEEN+SY EILL+CG+YEELNEVARTARKLESFKLFHCG+G
Sbjct: 852 PSTDFPCIRVSTLELITWMVEENSSYREILLKCGIYEELNEVARTARKLESFKLFHCGVG 911
Query: 824 IPTERTIECISSLATKLQEKLKKIPDFERRYR-YGEHASRISVLIA 868
IPT+ IECISS AT+LQEKL++ P+FE+RY YGEHAS ISVLIA
Sbjct: 912 IPTDGPIECISSRATELQEKLQQSPNFEKRYICYGEHASSISVLIA 957
>Os01g0523500
Length = 777
Score = 283 bits (724), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 232/742 (31%), Positives = 361/742 (48%), Gaps = 160/742 (21%)
Query: 112 RLKKQDYLNPGDIMNDQNQNITWSLNIFYSLVFAQGI--MFVTILLNPLSYYFLFNAGIK 169
RL KQDY++P D + +++I SLN+FY LV QG + + +
Sbjct: 172 RLSKQDYVDPADQGSSDHKSIKGSLNLFYGLVLVQGASDLLAQAMFTVADIQLVLKITEA 231
Query: 170 YKLFDPSGLKIILNYKRCNYLEFIAGNVKATLQMHLVTFAKKLAVSNMADDKLLGVGAMD 229
Y+L P G +++ +Y YL GNV+ + M LV+FA +L SN D+L+GVG +D
Sbjct: 232 YQL-GPLGKQMVSHYMLVTYLRCSGGNVREAMNMDLVSFAMELVRSNSIADRLVGVGVLD 290
Query: 230 RILRSMEFRSLALRKLRAFMEPDELGKLVNMLGYDKSHKNKTTEEEDIRGHTARVVLKLS 289
ILR ++R+LAL +LRA D +G +V+MLG N T +E + RGH A V+L+LS
Sbjct: 291 SILRVPKYRALALMRLRA--SADTVGGVVSMLGL----TNNTRKEVNTRGHAAGVILELS 344
Query: 290 PDLLVQSYPQILYAIXXXXXXXXXXXXXRVCKCNMDSDLVWFGLRILDKLTDNPENCRKA 349
DLL++S+P +L + + + WFG++IL+K+ DNP+NC K
Sbjct: 345 RDLLLESFPAMLPIVSSLIVAADNSGN----DVTVSMEFTWFGVKILNKIMDNPDNCNKV 400
Query: 350 TNDESGGDLLSTIIDLTIPCCHGHGHGRSMRSNTSTISDSWIEQEIIPLLQTENEIPLPF 409
+ + G ++++I++LT G RS+ S +S S +
Sbjct: 401 ADAD--GQVIASIVNLTAVT----GDDRSL----SIVSSSAVR----------------- 433
Query: 410 IDKLDQEIIVGMALNILSKLVAAPDEAGEKLRKETSKHVHFLTNTGMILDH--------V 461
D+EII+ A+ +L KLV+A ++G LR + S +V+ L N IL H V
Sbjct: 434 ----DEEIILE-AVQVLHKLVSAAGDSGRVLRCKVSDNVYVLRNISKILQHPRSQVKLLV 488
Query: 462 QATRVISCLAVDKEGREYIGKFPEIIKKLKDCLLSKTPYVNITKVAAKLLVLECTGDEQL 521
+A V++CLA+D+ TG E++
Sbjct: 489 EAIGVLACLALDE-----------------------------------------TGREEI 507
Query: 522 LNQIQLFIEENRTVEDQSFSLPISAFIEELDFD--QLHQPWIWNFVQSLDVEDALFAPRV 579
+ Q+ + V SF +P S I E+ D QL +P
Sbjct: 508 ASSPQII---RKLV---SFLVPRSQMISEISADRRQLAKP-------------------- 541
Query: 580 NHSDAAAKALILLTTECASNVEAFLQGINKEELNKIVNALSSED-GDKEKRRALAQFEGR 638
A+AL++L + S V + + +++ K+V LS++ G K +A+ G
Sbjct: 542 -----NAEALVMLAMDNQSIVWKIQEELKPQDMQKLVEMLSADSTGFKTN---VAKLSG- 592
Query: 639 RNLDPETLRRVKKIILAEGEEQATGPKEFDEYMK-LIDAALPKVLKAVVDAVATLEDPS- 696
IL A E K +I+ ALP +LKA+ V LEDP
Sbjct: 593 --------------IL-----HANSRAEHAHLQKTIINTALPTLLKAIKSEVEKLEDPVL 633
Query: 697 -SAENLDHVKDDMW-IKQGKVLESFIGLAVQICRSPNKRSDFSTALKYANLTADTLIKKL 754
+ E+ ++ ++ W KQG +LESF+GL+VQIC S + SDF+ AL+ AN+T +++KL
Sbjct: 634 YAGEHANNFQE--WRTKQGALLESFVGLSVQICTSIHA-SDFNEALRSANVTVYMVMQKL 690
Query: 755 KKILEVYMSPSTDFPCIRVSTLELITWMVEENNSYWEILLQCGVYEELNEVARTARKLES 814
+KIL++Y SP+ +FP IR +ELI WM + ++ E+ QC + + L EVA T +LE
Sbjct: 691 RKILDLYKSPAIEFPGIRRVAVELIIWMKQCSSHCNEVFFQCEMDKALKEVAGTEERLEM 750
Query: 815 FKLFHCGIGIPTERTIECISSL 836
FK+F+ G+GI E ISSL
Sbjct: 751 FKIFYYGVGIVKHS--EPISSL 770
>Os01g0522433 Armadillo-like helical domain containing protein
Length = 619
Score = 162 bits (410), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 222/467 (47%), Gaps = 98/467 (20%)
Query: 109 SWKRLKKQDYLNPGDIMNDQNQNITWSLNIFYSLVFAQGIMFVTILLNPLSYYFLFNAGI 168
S++RL KQDY++P D + D ++NI SLN+FY L A + + ++ +++ FL +
Sbjct: 23 SFRRLLKQDYVDPKDKVKDDHKNIRGSLNVFYGLALAHSMSYYILI---VAFQFLVAPLV 79
Query: 169 K-----YKLFDPSGLKIILNYKRCNYLEFIAGNVKATLQMHLVTFAKKLAVSNMADDKLL 223
+ YKL D G+ + Y FI NV+ L+M+L+TF K+LA S+ DD+L
Sbjct: 80 RLVHSSYKLHD-WGMDAVSEYTAKKLWAFIRYNVREALEMNLITFGKELARSDSIDDQLK 138
Query: 224 GVGAMDRILR----------------SMEFRSLALRKLRAFMEPDELGKLVNMLGYDKSH 267
GV +D I+R +++ L +RA E L ++VNMLG +
Sbjct: 139 GVRILDYIIRWEKQHLSRAGVLDIYKIEKYKGRVLTSIRASTET--LERVVNMLGLNL-- 194
Query: 268 KNKTTEEEDIRGHTARVVLKLSPDLLVQSYPQILYAIXXXXXXXXXXXXXRVCKCNMD-- 325
K+ EEE+ RGH A +VL+L+P LL ++ P A+ R+ + D
Sbjct: 195 --KSLEEEETRGHAASIVLELAPYLLFENLP----AMPQLIASLLTTGRERINEGPHDIN 248
Query: 326 -SDLVWFGLRILDKLTDNPENCRKATNDESGGDLLSTIIDLTIPCCHGHGHGRSMRSNTS 384
+L +G++IL++L +NP+N R ++ D +
Sbjct: 249 SVELTCYGVKILERLVENPDNRR-------------SVADANV----------------- 278
Query: 385 TISDSWIEQEIIPLLQTENEIPLPFIDKLD---QEIIVGMALNILSKLVAAPDEAGEKLR 441
+ +I+ LL ++ +P D+ + QE IV +LN+L KLV+ E GE LR
Sbjct: 279 ------VLSKIVELLNFRDDCKVPVPDETENRSQEEIVEASLNVLHKLVSTTGETGEALR 332
Query: 442 KETSKHVHFLTNTGMILDH---------VQATRVISCLAVDKEGREYIGKFPEIIKKLKD 492
SK+ ++N IL V A +++SCLA+ + RE IG +I++KL
Sbjct: 333 STISKNSEIMSNIRKILYQHDNKNSSLSVHAVKILSCLAMHETAREVIGSSCQIVRKLVS 392
Query: 493 CLLSKTPYV--------NITKVAAKLLVLECTGDE----QLLNQIQL 527
+L + + + AA+ LVL TG E +L++I L
Sbjct: 393 SVLPRPMDIVQDGNNGSTVADSAAQALVLLSTGSEYNRATILDKINL 439
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 60/244 (24%)
Query: 582 SDAAAKALILLTTECASNVEAFLQGINKEELNKIVNALSSEDGDKEKRRALAQFEGRRNL 641
+D+AA+AL+LL+T N L IN EEL ++ D E+R +A
Sbjct: 412 ADSAAQALVLLSTGSEYNRATILDKINLEELVGMLF-----DASMEQRIMIAHL------ 460
Query: 642 DPETLRRVKKIILAEGEEQATGPKEFDEYMKLIDAALPKVLKAVVDAVATLEDPSSAENL 701
L+ ++ +GP ++ K+ID +LPK+L+ + AV L++P +
Sbjct: 461 ----LKHLRTY---------SGPGYGNQLKKVIDGSLPKLLEEIKVAVQKLDNPEFPDGQ 507
Query: 702 -DHVKDDMWIKQGKVLESFIGLAVQICRSPNKRSDFSTALKYANLTADTLIKKLKKILEV 760
H ++ ++GK+L+SFIGL+ QIC S + DF AL+ ANLT DT +
Sbjct: 508 PSHDLKELKAEEGKLLDSFIGLSSQICHSL-QAIDFDKALQSANLTMDTYAQ-------- 558
Query: 761 YMSPSTDFPCIRVSTLELITWMVEENNSYWEILLQCGVYEELNEVARTARKLESFKLFHC 820
+ Y + + + + L EVA TA +LESF+LF
Sbjct: 559 --------------------------DDYVGVFKRYEMDKALKEVAETATELESFELFCS 592
Query: 821 GIGI 824
G G+
Sbjct: 593 GSGV 596
>Os01g0522800 Armadillo-like helical domain containing protein
Length = 735
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 164/358 (45%), Gaps = 50/358 (13%)
Query: 19 PAQQIFLRAPEALMKYKRTSTLKGLSWWXXXXXXXXXXXXXXXXXXXXXHKEEK------ 72
P Q F+ PEA++K R + L SW EEK
Sbjct: 69 PEDQFFIGLPEAIIKADRIAVLGRGSW------------------RRYRSDEEKPDDYTK 110
Query: 73 --IWYLCSIYGCQALLGMTIXXXXXXXXXXXXXXXXXXSWKRLKKQDYLNPGDIMNDQNQ 130
+ + ++ L + S RLK+QDY++P ND ++
Sbjct: 111 IFLELFSAFINGRSCLAVLYQTTLGYAQLAAVIGTMVISSLRLKRQDYVDPIYQQNDDHK 170
Query: 131 NITWSLNIFYSLVFAQGIMF--VTILLNPLSYYFLFNAGIKYKLFDPSGLKIILNYKRCN 188
NI WSLNIFY L +Q I++ V+IL NPL + G+ YKL L + + C
Sbjct: 171 NIRWSLNIFYGLALSQCIVYFLVSILANPLKR--MLRVGLTYKLGFWGVLSLARYVEEC- 227
Query: 189 YLEFIAGNVKATLQMHLVTFAKKLAVSNMADDKLLGVGAMDRILRSMEFRSLALRKLRAF 248
L+ ++G+++ + M LV+F+ +L S+ +++L+G +D +LRS ++ L+K+R
Sbjct: 228 LLKCVSGDLRGAVSMDLVSFSNELLSSDSIENQLIGFRIVDHLLRSKMYKQRVLKKIRVS 287
Query: 249 MEPDELGKLVNMLGYDKSHKNKTTEEEDIRGHTARVVLKLSPDLLVQSYPQILYAIXXXX 308
+ ++ V+ML K + D RGH ARV+L+L+PDL V+S+P IL AI
Sbjct: 288 IGTIQMA--VHMLSL------KIDMDTDTRGHAARVLLELAPDLQVESFPGILPAISSLL 339
Query: 309 XXXXXXXXXRVCKCNMDSDLVWFGLRILDKLTDNPENCRKATNDESGGDLLSTIIDLT 366
+ + IL+KL D+ +NC T + DL+ II+LT
Sbjct: 340 STNKGATNSESSSNPITA--------ILEKLVDDQDNC---TQVKDAKDLIPNIIELT 386
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 143/275 (52%), Gaps = 37/275 (13%)
Query: 577 PRVNHSDAAAKALILLTTECA----------SNVEAFLQGINKEELNKIVNALSSEDGDK 626
PR A +AL+LLTT SNV+A L E++ IV+ LS E D
Sbjct: 476 PRKMMETLATEALVLLTTHFKEKIVLSIVRESNVQAILAETMVEDMENIVHVLSDESADH 535
Query: 627 EKRRALAQFEGRRNLDPETLRRVKKIILAEGEEQATGPKEFDEYMKLIDAALPKVLKAVV 686
R + + +NL +A E+ E K+ID ALPKVL+ +
Sbjct: 536 --RIGVGKL--LQNL------------------RAYQGAEYTELFKIIDKALPKVLETID 573
Query: 687 DAVATLEDPSSAENLDHVKD--DMWIKQGKVLESFIGLAVQICRSPNKRSDFSTALKYAN 744
A + +E SS ++ H ++ D +GK+LESFIGL VQIC + ++ F+ AL+ AN
Sbjct: 574 LAESKIESDSSDDHSSHAQELIDSAEGKGKLLESFIGLTVQICTNGDEMV-FTDALRSAN 632
Query: 745 LTADTLIKKLKKILEVYMSPSTDFPCIRVSTLELITWMVEENNSYWEILLQCGVYEELNE 804
+T D + KLK IL VY SP+ DFP +R ++ + WM+E+N +Y + + + L E
Sbjct: 633 ITVDEFVLKLKMILTVYKSPTADFPGVRRVVIQQMNWMMEKNPAYIVVFKKHEMDIILKE 692
Query: 805 VARTARKLESFKLFHCGIGIPTERTIECISSLATK 839
A TA K+E+F LFH G+G E ISS+ +K
Sbjct: 693 TAETATKIENFLLFHSGVGAFEHE--ESISSIVSK 725
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 26,006,240
Number of extensions: 996855
Number of successful extensions: 2681
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2671
Number of HSP's successfully gapped: 8
Length of query: 868
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 758
Effective length of database: 11,292,261
Effective search space: 8559533838
Effective search space used: 8559533838
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 160 (66.2 bits)