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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0141000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.01 (0.0198) R2 : 0.00641
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0716 (0.0417) R2dN8 : 0.00828 R2N8 : 0.00641
σ : 0.373
deviance : 64.01
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
62.15 0.367 3.01 0.108 0.11 -0.144 -0.245 0.117 0.0795 4.9 1010 10 -- --
62.19 0.37 3.01 0.0999 0.111 -0.148 -0.245 -- 0.0782 4.96 1010 10 -- --
62.3 0.37 3.01 0.109 0.109 -0.146 -- 0.12 0.0807 5.16 1010 10 -- --
62.34 0.37 3.01 0.101 0.109 -0.15 -- -- 0.0794 5.15 1010 6 -- --
62.91 0.371 3.01 0.114 -- -0.157 -- 0.131 0.0835 -- 1010 10 -- --
62.85 0.372 3.01 0.0944 0.12 -- -0.264 -- 0.0783 5.29 -- -- -- --
63.02 0.372 3.01 0.0943 0.119 -- -- -- 0.0796 5.58 -- -- -- --
62.97 0.371 3.01 0.105 -- -0.161 -- -- 0.0822 -- 1010 6 -- --
62.61 0.371 3.01 -- 0.111 -0.146 -- -- 0.0682 5.13 1010 6 -- --
63.76 0.373 3.01 0.0981 -- -- -- -- 0.0825 -- -- -- -- --
63.25 0.372 3.01 -- 0.121 -- -- -- 0.0691 5.55 -- -- -- --
63.26 0.372 3.01 -- -- -0.157 -- -- 0.0706 -- 1010 6 -- --
64.01 0.373 3.01 -- -- -- -- -- 0.0716 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 53.98 radiation 10.0 10 > th dose independent rect. 6 1
27 53.98 radiation 10.0 10 > th dose dependent rect. 6 1
53 54.97 wind 3.0 30 < th dose dependent rect. 2 1
56 55.00 wind 3.0 30 < th dose independent rect. 2 1
58 55.01 humidity 80.0 30 > th dose independent rect. 2 1
59 55.02 temperature 10.0 30 > th dose dependent rect. 2 1
61 55.03 humidity 50.0 30 > th dose dependent rect. 2 1
62 55.04 wind 9.0 30 < th dose independent rect. 2 1
63 55.04 temperature 10.0 30 > th dose independent rect. 2 1
65 55.04 temperature 30.0 30 < th dose independent rect. 2 1
66 55.04 humidity 50.0 30 > th dose independent rect. 2 1
69 55.04 atmosphere 995.0 30 > th dose independent rect. 2 1
70 55.04 atmosphere 1010.0 30 < th dose independent rect. 2 1
72 55.04 radiation 1.0 30 < th dose independent rect. 2 1
77 55.04 precipitation 0.1 30 < th dose independent rect. 2 1
78 55.04 temperature 10.0 30 > th dose independent rect. 3 23
81 55.04 radiation 1.0 30 < th dose dependent rect. 2 1
86 55.04 precipitation 0.1 30 < th dose dependent rect. 2 1
90 55.06 atmosphere 1005.0 30 > th dose dependent rect. 2 1
93 55.09 atmosphere 995.0 30 > th dose dependent rect. 2 1
96 55.11 atmosphere 1015.0 30 < th dose dependent rect. 2 1
97 55.12 atmosphere 1005.0 30 > th dose independent rect. 2 1
101 55.28 temperature 30.0 30 < th dose dependent rect. 2 1
113 55.84 wind 1.0 30 > th dose independent rect. 2 1
149 56.16 atmosphere 1005.0 30 > th dose dependent rect. 6 1
151 56.17 wind 3.0 30 < th dose dependent rect. 6 1
152 56.18 wind 9.0 30 < th dose independent rect. 3 23
159 56.91 humidity 80.0 30 > th dose dependent rect. 6 1
165 57.28 temperature 30.0 30 < th dose dependent rect. 6 1
174 57.58 wind 3.0 30 < th dose independent rect. 6 1
178 57.88 temperature 20.0 30 > th dose independent rect. 6 1
179 57.89 wind 9.0 1440 < th dose independent rect. 7 1
180 57.89 temperature 10.0 1440 > th dose independent rect. 7 1
184 57.89 temperature 30.0 1440 < th dose independent rect. 7 1
188 57.89 humidity 50.0 1440 > th dose independent rect. 7 1
193 57.89 atmosphere 995.0 1440 > th dose independent rect. 7 1
194 57.89 atmosphere 1015.0 1440 < th dose independent rect. 7 1
195 57.89 temperature 10.0 1440 > th dose independent rect. 8 23
199 57.97 humidity 80.0 30 > th dose independent rect. 6 1
200 57.97 humidity 90.0 30 < th dose independent rect. 6 1
202 57.98 atmosphere 1005.0 30 > th dose independent rect. 6 1
208 58.02 temperature 10.0 30 > th dose independent rect. 6 1
210 58.02 temperature 30.0 30 < th dose independent rect. 6 1
211 58.02 humidity 50.0 30 > th dose independent rect. 6 1
214 58.02 atmosphere 995.0 30 > th dose independent rect. 6 1
216 58.02 atmosphere 1015.0 30 < th dose independent rect. 6 1
217 58.02 radiation 20.0 30 < th dose independent rect. 6 1
220 58.02 precipitation 0.1 30 < th dose independent rect. 6 1
221 58.02 temperature 10.0 30 > th dose independent rect. 7 23
222 58.02 precipitation 0.1 30 < th dose dependent rect. 6 1
223 58.04 wind 1.0 30 > th dose independent rect. 6 1
227 58.27 temperature 10.0 30 > th dose dependent rect. 6 1
229 58.39 radiation 40.0 30 < th dose dependent rect. 6 1
240 58.62 wind 9.0 30 < th dose independent rect. 7 23
275 59.41 atmosphere 1015.0 30 < th dose dependent rect. 6 1
277 59.62 humidity 90.0 10 < th dose dependent rect. 6 1
279 59.65 atmosphere 995.0 30 > th dose independent rect. 3 23
288 60.05 precipitation 0.1 30 < th dose independent rect. 7 23
289 60.05 precipitation 0.1 30 < th dose dependent rect. 7 23
291 60.23 wind 1.0 30 > th dose dependent rect. 6 1
314 60.58 atmosphere 1005.0 30 > th dose dependent rect. 2 5
339 60.68 atmosphere 995.0 30 > th dose independent rect. 7 23
343 60.75 precipitation 0.1 30 < th dose independent rect. 3 23
344 60.75 precipitation 0.1 30 < th dose dependent rect. 3 23
367 61.01 atmosphere 1010.0 10 < th dose independent rect. 3 23
390 61.12 wind 1.0 30 > th dose dependent rect. 2 1
393 61.14 humidity 90.0 90 < th dose independent rect. 2 5
395 61.15 humidity 90.0 90 < th dose independent rect. 2 1
397 61.18 wind 3.0 270 > th dose independent rect. 3 1
413 61.31 temperature 20.0 90 > th dose dependent rect. 3 4
419 61.35 temperature 25.0 720 > th dose dependent rect. 23 10
420 61.36 temperature 10.0 720 > th dose independent rect. 15 8
421 61.36 temperature 10.0 720 > th dose independent rect. 23 16
427 61.38 radiation 40.0 720 < th dose independent rect. 15 8
437 61.40 wind 7.0 1440 < th dose independent rect. 3 1
438 61.40 temperature 10.0 720 > th dose independent rect. 3 8
439 61.40 atmosphere 995.0 720 > th dose independent rect. 3 8
440 61.40 temperature 10.0 720 > th dose independent rect. 11 16
441 61.41 precipitation 0.1 720 < th dose independent rect. 19 8
445 61.41 precipitation 0.1 720 < th dose dependent rect. 19 8
446 61.42 wind 9.0 720 < th dose independent rect. 3 8
447 61.42 atmosphere 1015.0 720 < th dose independent rect. 3 8
448 61.43 atmosphere 1010.0 10 < th dose independent sin 6 NA
450 61.43 atmosphere 995.0 720 > th dose independent rect. 23 16
452 61.44 temperature 10.0 1440 > th dose independent rect. 3 1
455 61.44 temperature 30.0 1440 < th dose independent rect. 3 1
459 61.44 humidity 50.0 1440 > th dose independent rect. 3 1
468 61.44 atmosphere 995.0 1440 > th dose independent rect. 3 1
469 61.44 radiation 1.0 1440 < th dose independent rect. 3 1
491 61.44 temperature 10.0 1440 > th dose independent rect. 4 23
494 61.44 radiation 1.0 1440 < th dose dependent rect. 3 1
504 61.45 atmosphere 995.0 720 > th dose independent rect. 7 8
522 61.48 atmosphere 1010.0 10 < th dose independent rect. 3 10
528 61.49 wind 9.0 720 < th dose independent rect. 19 8
539 61.50 temperature 10.0 720 > th dose independent rect. 7 8
540 61.50 temperature 10.0 720 > th dose independent rect. 19 8
541 61.50 temperature 30.0 720 < th dose independent rect. 19 8
542 61.50 humidity 50.0 720 > th dose independent rect. 19 8
543 61.50 atmosphere 995.0 720 > th dose independent rect. 19 8
544 61.50 atmosphere 1015.0 720 < th dose independent rect. 7 8
546 61.50 radiation 1.0 720 < th dose independent rect. 19 8
555 61.50 temperature 10.0 720 > th dose independent rect. 3 16
556 61.50 temperature 10.0 720 > th dose independent rect. 15 16
564 61.50 radiation 1.0 720 < th dose dependent rect. 19 8
600 61.54 temperature 25.0 1440 > th dose dependent rect. 3 6
609 61.56 atmosphere 1015.0 1440 < th dose independent rect. 3 1
617 61.57 precipitation 0.1 720 < th dose independent rect. 7 8
620 61.57 precipitation 0.1 720 < th dose dependent rect. 7 8
621 61.58 atmosphere 1010.0 10 < th dose independent rect. 3 12
628 61.59 atmosphere 1010.0 10 < th dose independent rect. 23 10
631 61.59 temperature 25.0 1440 > th dose dependent rect. 7 2
649 61.62 atmosphere 995.0 720 > th dose independent rect. 3 16
650 61.62 atmosphere 1015.0 720 < th dose independent rect. 3 16
651 61.62 humidity 50.0 30 > th dose independent rect. 7 23
654 61.63 humidity 50.0 720 > th dose independent rect. 3 8
663 61.64 radiation 40.0 720 < th dose independent rect. 15 16
669 61.65 temperature 25.0 720 > th dose independent rect. 23 11
675 61.66 temperature 30.0 30 < th dose independent rect. 7 23
677 61.67 atmosphere 1010.0 10 < th dose independent rect. 23 23
687 61.68 precipitation 0.1 720 < th dose independent rect. 3 16
692 61.68 precipitation 0.1 720 < th dose dependent rect. 3 16
695 61.69 atmosphere 995.0 720 > th dose independent rect. 15 16
703 61.70 atmosphere 1010.0 10 < th dose independent rect. 24 13
712 61.72 radiation 10.0 30 > th dose independent sin 11 NA
719 61.72 temperature 10.0 30 > th dose dependent rect. 3 23
722 61.73 wind 9.0 720 < th dose independent rect. 15 8
736 61.74 precipitation 0.1 720 < th dose independent rect. 15 16
743 61.74 precipitation 0.1 720 < th dose dependent rect. 15 16
744 61.75 temperature 25.0 1440 > th dose independent rect. 8 1
776 61.76 humidity 70.0 1440 < th dose independent rect. 10 1
812 61.78 precipitation 0.1 720 < th dose independent rect. 15 8
817 61.78 precipitation 0.1 720 < th dose dependent rect. 15 8
861 61.81 humidity 70.0 1440 > th dose independent rect. 10 1
863 61.81 temperature 25.0 1440 > th dose independent rect. 3 6
864 61.81 precipitation 0.1 720 < th dose independent rect. 7 10
874 61.81 precipitation 0.1 720 < th dose dependent rect. 7 10
875 61.82 atmosphere 1010.0 10 < th dose independent rect. 4 5
878 61.82 humidity 50.0 30 > th dose independent rect. 3 23
887 61.83 temperature 25.0 10 > th dose independent rect. 22 10
888 61.83 wind 9.0 720 < th dose independent rect. 15 16
889 61.83 wind 1.0 30 > th dose independent rect. 7 23
909 61.85 wind 1.0 270 > th dose dependent rect. 3 1
923 61.86 temperature 25.0 720 > th dose independent rect. 23 16
940 61.87 wind 3.0 10 < th dose dependent rect. 6 21
946 61.88 atmosphere 995.0 720 > th dose independent rect. 9 6
947 61.88 wind 9.0 720 < th dose independent rect. 19 10
951 61.88 precipitation 0.1 720 < th dose independent rect. 11 16
965 61.88 precipitation 0.1 720 < th dose dependent rect. 11 16
966 61.88 temperature 10.0 30 > th dose dependent rect. 7 23
972 61.89 precipitation 0.1 720 < th dose independent rect. 3 8
981 61.89 precipitation 0.1 720 < th dose dependent rect. 3 8
992 61.90 temperature 10.0 720 > th dose independent rect. 19 10
993 61.90 temperature 30.0 720 < th dose independent rect. 19 10
994 61.90 humidity 50.0 720 > th dose independent rect. 19 10
995 61.90 atmosphere 995.0 720 > th dose independent rect. 19 10
996 61.90 radiation 20.0 720 < th dose independent rect. 19 10
1000 61.90 wind 9.0 720 < th dose independent rect. 17 14