BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0620400 Os04g0620400|AK066330
(661 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0620400 SIT4 phosphatase-associated protein family pro... 1190 0.0
Os05g0592500 SIT4 phosphatase-associated protein family pro... 827 0.0
Os01g0585700 SIT4 phosphatase-associated protein family pro... 353 3e-97
>Os04g0620400 SIT4 phosphatase-associated protein family protein
Length = 661
Score = 1190 bits (3079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/661 (89%), Positives = 592/661 (89%)
Query: 1 MFWHVPGISAASPVDTIXXXXXXXXXXXXXXXXIIQECKALNTRLINFLRDKVQVEQLLH 60
MFWHVPGISAASPVDTI IIQECKALNTRLINFLRDKVQVEQLLH
Sbjct: 1 MFWHVPGISAASPVDTILDKENFKLEDLLDEDEIIQECKALNTRLINFLRDKVQVEQLLH 60
Query: 61 YIVEEAPEDAEKKRIFRFPFVACEIFTCEVDVIMKTLVENEDLMDLLFSYLKPDRPHGTL 120
YIVEEAPEDAEKKRIFRFPFVACEIFTCEVDVIMKTLVENEDLMDLLFSYLKPDRPHGTL
Sbjct: 61 YIVEEAPEDAEKKRIFRFPFVACEIFTCEVDVIMKTLVENEDLMDLLFSYLKPDRPHGTL 120
Query: 121 LAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDLIGITSIMEVLIRLIGADETMYSG 180
LAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDLIGITSIMEVLIRLIGADETMYSG
Sbjct: 121 LAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDLIGITSIMEVLIRLIGADETMYSG 180
Query: 181 YVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAITRYAPPALATKISSASFVAR 240
YVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAITRYAPPALATKISSASFVAR
Sbjct: 181 YVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAITRYAPPALATKISSASFVAR 240
Query: 241 LFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLASYQVFRSQLSHATLVTASPETVXXXX 300
LFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLASYQVFRSQLSHATLVTASPETV
Sbjct: 241 LFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLASYQVFRSQLSHATLVTASPETVGGML 300
Query: 301 XXXXXXXXXXXXXXAENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGSEAAEIRLIHLG 360
AENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGSEAAEIRLIHLG
Sbjct: 301 DSLGDLLKLLDVSSAENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGSEAAEIRLIHLG 360
Query: 361 AIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILEAEKNSAL 420
AIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILEAEKNSAL
Sbjct: 361 AIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILEAEKNSAL 420
Query: 421 SIDLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHAGTL 480
SIDLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHAGTL
Sbjct: 421 SIDLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHAGTL 480
Query: 481 TRCNAVENVYQWACGRPTTLQXXXXXXXXXXXXXXXXXVAALASNLSQASKYGIYSYEDI 540
TRCNAVENVYQWACGRPTTLQ VAALASNLSQASKYGIYSYEDI
Sbjct: 481 TRCNAVENVYQWACGRPTTLQDRGRDSDEEDFRDRDYDVAALASNLSQASKYGIYSYEDI 540
Query: 541 DEDQVPHERDDEDVYFDDESAEVVISSLRLGDEHDSNSLFTNSNWFAFGEDKALNGXXXX 600
DEDQVPHERDDEDVYFDDESAEVVISSLRLGDEHDSNSLFTNSNWFAFGEDKALNG
Sbjct: 541 DEDQVPHERDDEDVYFDDESAEVVISSLRLGDEHDSNSLFTNSNWFAFGEDKALNGEVNP 600
Query: 601 XXXXXXXXXXXXXXVDDENDEVILTEVTDGRKGSESLLAVDLNEESSHTGLTNVSIDKLE 660
VDDENDEVILTEVTDGRKGSESLLAVDLNEESSHTGLTNVSIDKLE
Sbjct: 601 EASPSPNSEISSPNVDDENDEVILTEVTDGRKGSESLLAVDLNEESSHTGLTNVSIDKLE 660
Query: 661 D 661
D
Sbjct: 661 D 661
>Os05g0592500 SIT4 phosphatase-associated protein family protein
Length = 770
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/628 (65%), Positives = 469/628 (74%), Gaps = 1/628 (0%)
Query: 1 MFWHVPGISAASPVDTIXXXXXXXXXXXXXXXXIIQECKALNTRLINFLRDKVQVEQLLH 60
MFW + G+SAASPVDTI IIQECKALNTRLINFLRDK QVEQLL
Sbjct: 1 MFWRMTGLSAASPVDTILDKENFTLEELLDEDEIIQECKALNTRLINFLRDKAQVEQLLR 60
Query: 61 YIVEEAPEDAEKKRIFRFPFVACEIFTCEVDVIMKTLVENEDLMDLLFSYLKPDRPHGTL 120
YIVEE PED+EKKR F+FPF+ACEIFTCE+D+I++TLVE+E+LMDLLFS+++P PH TL
Sbjct: 61 YIVEEVPEDSEKKRSFKFPFIACEIFTCEIDIILRTLVEDEELMDLLFSFVRPGHPHSTL 120
Query: 121 LAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDLIGITSIMEVLIRLIGADETMYSG 180
LAGYF KVVICLMLRKT P +NYVQ HP+IV LVDLIG TSIMEVLIRLIGADET+YS
Sbjct: 121 LAGYFSKVVICLMLRKTSPLMNYVQEHPDIVVHLVDLIGTTSIMEVLIRLIGADETIYSN 180
Query: 181 YVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAITRYAPPALATKISSASFVAR 240
Y D++QWL++ VLEMIVDKFSSSDSPEVHANAAEIL A+TR APPALA KI S SFV R
Sbjct: 181 YADTLQWLENTDVLEMIVDKFSSSDSPEVHANAAEILSAVTRCAPPALAAKICSPSFVGR 240
Query: 241 LFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLASYQVFRSQLSHATLVTASPETVXXXX 300
LF HA ++SRPKSVLVHSLSVCISLLDPKRL ASYQ FRS LSH TLVTASPETV
Sbjct: 241 LFRHALQESRPKSVLVHSLSVCISLLDPKRLASASYQAFRSNLSHGTLVTASPETVDGML 300
Query: 301 XXXXXXXXXXXXXXAENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGSEAAEIRLIHLG 360
AENVLPTTYG LQPPLGK RLKIVEFISVLL+IGSE AE LI+
Sbjct: 301 ESLGDLLKLLDISSAENVLPTTYGCLQPPLGKHRLKIVEFISVLLTIGSETAEQELINQS 360
Query: 361 AIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILEAEKNSAL 420
A+KR IDLFF+YP+NNFLHHHVESII SCL+ + QLI H L+EC LV +IL AE++S+L
Sbjct: 361 AVKRSIDLFFQYPYNNFLHHHVESIIISCLEVNRSQLIDHALNECNLVGKILAAERSSSL 420
Query: 421 SIDLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHAGTL 480
S + T+ EG+ P+IG +GH+TRI+NKLIQL +NSIIQSHLQ+NS W EW L
Sbjct: 421 STESNTPTLLSEGKVPPKIGNIGHITRIANKLIQLGNSNSIIQSHLQENSEWVEWQTTAL 480
Query: 481 TRCNAVENVYQWACGRPTTLQXXXXXXXXXXXXXXXXXVAALASNLSQASKYGIYSYEDI 540
+ N VENVY WACGRPT+L VAALA+NLSQA +YG+YS +DI
Sbjct: 481 VKRNEVENVYHWACGRPTSLHDRGRDSDDDDFRDRDYDVAALANNLSQAFRYGMYSNDDI 540
Query: 541 DEDQVPHERDDEDVYFDDESAEVVISSLRLGDEHDSNSLFTNSNWFAFGEDKALNGXXXX 600
+E QV ERDDEDVYFDDESAEVVISSLRLGD+ DS+SLFTNSNWF F D+ +N
Sbjct: 541 EEAQVI-ERDDEDVYFDDESAEVVISSLRLGDDQDSSSLFTNSNWFTFDGDRGINDRLAA 599
Query: 601 XXXXXXXXXXXXXXVDDENDEVILTEVT 628
+E DEV + E T
Sbjct: 600 SVPSSSPNSEETSLNTEETDEVQIGEDT 627
>Os01g0585700 SIT4 phosphatase-associated protein family protein
Length = 453
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/275 (61%), Positives = 205/275 (74%), Gaps = 1/275 (0%)
Query: 320 PTTYGVLQPPLGKQRLKIVEFISVLLSIGSEAAEIRLIHLGAIKRVIDLFFEYPFNNFLH 379
PTTYG L+PPLGK RLKIVEFISVLL+IGSE AE LI AIKR +DLFFEYP+NNFLH
Sbjct: 1 PTTYGCLRPPLGKHRLKIVEFISVLLTIGSETAEKELIRQSAIKRSVDLFFEYPYNNFLH 60
Query: 380 HHVESIISSCLDSKQDQLICHVLDECKLVTRILEAEKNSALSIDLTKHTVPLEGRFTPRI 439
HHVE+II SCL+ K+ +L+ HVL++C +V +IL AEK S+LS + T T+P +G+ P+I
Sbjct: 61 HHVENIIVSCLEGKRTELVEHVLNDCDIVGKILAAEKLSSLSTESTGPTIPSDGKSIPKI 120
Query: 440 GLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHAGTLTRCNAVENVYQWACGRPTT 499
G +GHMTRI+NKLIQL +N IQ HLQ+NS W +W L + N VENVY WACGRPT+
Sbjct: 121 GNIGHMTRITNKLIQLGSSNGTIQIHLQENSEWVDWQTDVLVKRNEVENVYHWACGRPTS 180
Query: 500 LQXXXXXXXXXXXXXXXXXVAALASNLSQASKYGIYSYEDIDEDQVPHERDDEDVYFDDE 559
L VAALA+NLSQA +YGIYS +D++E+Q ERDDEDVYFDDE
Sbjct: 181 LHDRGRDSDDDDFRDRDYDVAALANNLSQAFRYGIYSNDDMEENQGTLERDDEDVYFDDE 240
Query: 560 SAEVVISSLRLGDEHDSNSLFTNSNWFAFGEDKAL 594
SAEVVISSLRLGD+ D SLFTNSNWF F ++ +
Sbjct: 241 SAEVVISSLRLGDDQDG-SLFTNSNWFTFDGERGI 274
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,001,036
Number of extensions: 696923
Number of successful extensions: 1781
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1771
Number of HSP's successfully gapped: 3
Length of query: 661
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 554
Effective length of database: 11,448,903
Effective search space: 6342692262
Effective search space used: 6342692262
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 159 (65.9 bits)