Os05g0592500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : SIT4 phosphatase-associated protein family protein.
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Os05g0592500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : SIT4 phosphatase-associated protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.61 | 0.186 | 9.88 | 0.64 | 0.414 | -0.0808 | 0.104 | -1.29 | 0.322 | 8.11 | 42.45 | 4745 | -- | -- |
| 16.95 | 0.193 | 9.92 | 0.386 | 0.411 | 0.141 | 0.108 | -- | 0.266 | 8.45 | 56.26 | 2929 | -- | -- |
| 15.64 | 0.184 | 9.88 | 0.64 | 0.413 | -0.0787 | -- | -1.28 | 0.322 | 8.08 | 50.51 | 4676 | -- | -- |
| 16.95 | 0.192 | 9.92 | 0.395 | 0.402 | 0.147 | -- | -- | 0.267 | 8.42 | 72.13 | 97 | -- | -- |
| 24.92 | 0.232 | 9.89 | 0.635 | -- | -0.102 | -- | -1.25 | 0.329 | -- | 27.94 | 4488 | -- | -- |
| 17.14 | 0.194 | 9.93 | 0.36 | 0.411 | -- | 0.0954 | -- | 0.246 | 8.08 | -- | -- | -- | -- |
| 17.16 | 0.194 | 9.93 | 0.362 | 0.412 | -- | -- | -- | 0.246 | 8.05 | -- | -- | -- | -- |
| 23.78 | 0.227 | 9.92 | 0.462 | -- | 0.415 | -- | -- | 0.311 | -- | 35.6 | 549 | -- | -- |
| 20.59 | 0.212 | 9.94 | -- | 0.415 | -0.0519 | -- | -- | 0.199 | 7.85 | 72.13 | 97 | -- | -- |
| 26.44 | 0.24 | 9.94 | 0.366 | -- | -- | -- | -- | 0.251 | -- | -- | -- | -- | -- |
| 20.62 | 0.212 | 9.94 | -- | 0.414 | -- | -- | -- | 0.206 | 7.98 | -- | -- | -- | -- |
| 28.91 | 0.25 | 9.94 | -- | -- | 0.252 | -- | -- | 0.241 | -- | 46.96 | 518 | -- | -- |
| 29.97 | 0.256 | 9.95 | -- | -- | -- | -- | -- | 0.21 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.72 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 3 | 14.92 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 7 | 15.00 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 23 | 13 |
| 9 | 15.04 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 25 | 15.09 | temperature | 25.0 | 30 | < th | dose independent | rect. | 4 | 4 |
| 29 | 15.10 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 34 | 15.13 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 40 | 15.15 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 43 | 15.16 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 46 | 15.16 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 22 | 16 |
| 49 | 15.17 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 50 | 15.19 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 54 | 15.20 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 58 | 15.21 | wind | 1.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 61 | 15.21 | wind | 3.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 63 | 15.22 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 66 | 15.23 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 3 |
| 68 | 15.23 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 71 | 15.24 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 74 | 15.25 | wind | 7.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 76 | 15.25 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 79 | 15.25 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 81 | 15.25 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 83 | 15.25 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 87 | 15.26 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 88 | 15.26 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 14 | 9 |
| 94 | 15.27 | temperature | 25.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 99 | 15.28 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 14 |
| 101 | 15.28 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 107 | 15.29 | temperature | 15.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 122 | 15.30 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 18 |
| 124 | 15.30 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 21 |
| 128 | 15.30 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 21 | 17 |
| 129 | 15.30 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 130 | 15.30 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 131 | 15.31 | wind | 9.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 133 | 15.31 | temperature | 30.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 134 | 15.31 | humidity | 50.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 137 | 15.31 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 138 | 15.31 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 143 | 15.31 | wind | 5.0 | 4320 | > th | dose independent | rect. | 1 | 13 |
| 144 | 15.31 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 146 | 15.31 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 151 | 15.31 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 23 | 6 |
| 164 | 15.32 | temperature | 15.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 167 | 15.32 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 3 | 11 |
| 180 | 15.33 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 189 | 15.34 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 191 | 15.34 | wind | 9.0 | 4320 | > th | dose dependent | sin | 5 | NA |
| 192 | 15.34 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 12 | 2 |
| 194 | 15.34 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 201 | 15.35 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 202 | 15.35 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 244 | 15.37 | wind | 5.0 | 4320 | < th | dose independent | rect. | 1 | 13 |
| 245 | 15.37 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 271 | 15.38 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 12 | 4 |
| 283 | 15.38 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 285 | 15.39 | wind | 5.0 | 4320 | < th | dose independent | rect. | 22 | 16 |
| 294 | 15.40 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 6 |
| 304 | 15.40 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 6 |
| 309 | 15.40 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 23 | 15 |
| 318 | 15.41 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 321 | 15.41 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 23 | 9 |
| 328 | 15.41 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 13 |
| 336 | 15.42 | radiation | 40.0 | 720 | > th | dose independent | rect. | 13 | 1 |
| 341 | 15.42 | wind | 9.0 | 4320 | > th | dose independent | rect. | 21 | 17 |
| 342 | 15.42 | wind | 5.0 | 4320 | > th | dose dependent | sin | 5 | NA |
| 346 | 15.42 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 349 | 15.42 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 8 |
| 364 | 15.43 | humidity | 50.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 366 | 15.43 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 5 |
| 371 | 15.43 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 16 | 7 |
| 377 | 15.44 | wind | 9.0 | 4320 | > th | dose independent | rect. | 12 | 2 |
| 381 | 15.44 | wind | 9.0 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 388 | 15.44 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 15 |
| 391 | 15.44 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 410 | 15.45 | wind | 9.0 | 4320 | > th | dose independent | sin | 5 | NA |
| 412 | 15.45 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 458 | 15.46 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 1 |
| 463 | 15.46 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 464 | 15.46 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 5 | 7 |
| 492 | 15.47 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 5 | 8 |
| 532 | 15.48 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 16 |
| 538 | 15.49 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 8 |
| 552 | 15.49 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 564 | 15.50 | wind | 9.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 583 | 15.50 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 6 | 5 |
| 620 | 15.51 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 623 | 15.51 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 629 | 15.52 | wind | 5.0 | 4320 | > th | dose independent | sin | 5 | NA |
| 649 | 15.52 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 669 | 15.53 | wind | 5.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 671 | 15.53 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 711 | 15.53 | temperature | 25.0 | 4320 | < th | dose dependent | sin | 1 | NA |
| 713 | 15.53 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 23 | 2 |
| 722 | 15.53 | wind | 9.0 | 10 | < th | dose dependent | rect. | 23 | 6 |
| 735 | 15.53 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 755 | 15.54 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 756 | 15.54 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 802 | 15.54 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 807 | 15.54 | humidity | 90.0 | 270 | > th | dose dependent | sin | 3 | NA |
| 808 | 15.54 | atmosphere | 1005.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 809 | 15.54 | atmosphere | 1005.0 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 849 | 15.55 | temperature | 20.0 | 43200 | > th | dose independent | sin | 3 | NA |
| 850 | 15.55 | temperature | 20.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 852 | 15.55 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 853 | 15.55 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 855 | 15.55 | wind | 7.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 909 | 15.55 | temperature | 25.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 910 | 15.55 | temperature | 25.0 | 43200 | < th | dose dependent | sin | 3 | NA |
| 915 | 15.55 | atmosphere | 1015.0 | 43200 | > th | dose dependent | sin | 11 | NA |
| 918 | 15.55 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 920 | 15.55 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 926 | 15.55 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 930 | 15.55 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 5 | 4 |