BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0592400 Os04g0592400|AK073937
(762 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0592400 t-snare domain containing protein 1177 0.0
Os02g0439200 Protein kinase PKN/PRK1, effector domain conta... 408 e-113
Os10g0577100 148 2e-35
Os08g0481100 Conserved hypothetical protein 74 3e-13
>Os04g0592400 t-snare domain containing protein
Length = 762
Score = 1177 bits (3046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/736 (84%), Positives = 621/736 (84%)
Query: 1 MQGSKTKSGHAEAKSNGKAEAKGTPPTPKSXXXXXXXXXXXXXXXXXXDKSQSPGSADRK 60
MQGSKTKSGHAEAKSNGKAEAKGTPPTPKS DKSQSPGSADRK
Sbjct: 1 MQGSKTKSGHAEAKSNGKAEAKGTPPTPKSAKIARKPAVPKAPPRPSADKSQSPGSADRK 60
Query: 61 KSASRITTPPEKQGKATKPAQESVAAKPSPQEPVAVKPSSXXXXXXXXXXXXXXXXXXXX 120
KSASRITTPPEKQGKATKPAQESVAAKPSPQEPVAVKPSS
Sbjct: 61 KSASRITTPPEKQGKATKPAQESVAAKPSPQEPVAVKPSSQEQEQQALLAAVQQELVKAK 120
Query: 121 XXXXXXXXXXXXXXDELERAKRAADEANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
DELERAKRAADEAN
Sbjct: 121 EELVEKEKERGKVLDELERAKRAADEANAKLQEALAAQSKAAEESAAEQSGDAEAEQASA 180
Query: 181 XMEDELRTKLASMQSQQEADMAALRSTVEQLEQARYELADAIDAKNAALTQADDAMRASD 240
MEDELRTKLASMQSQQEADMAALRSTVEQLEQARYELADAIDAKNAALTQADDAMRASD
Sbjct: 181 SMEDELRTKLASMQSQQEADMAALRSTVEQLEQARYELADAIDAKNAALTQADDAMRASD 240
Query: 241 ENAEKIKLLDAEVAHLKGLLDSEVGSSSKGAVEHIRKLEEENSGLKLELEKANVAEQRAX 300
ENAEKIKLLDAEVAHLKGLLDSEVGSSSKGAVEHIRKLEEENSGLKLELEKANVAEQRA
Sbjct: 241 ENAEKIKLLDAEVAHLKGLLDSEVGSSSKGAVEHIRKLEEENSGLKLELEKANVAEQRAV 300
Query: 301 XXXXXXXXXXXXIADVKKARARSEELLGKWKTKALELEVRLEEADQSNILKGESLESAMK 360
IADVKKARARSEELLGKWKTKALELEVRLEEADQSNILKGESLESAMK
Sbjct: 301 ELEGVVEQLEVEIADVKKARARSEELLGKWKTKALELEVRLEEADQSNILKGESLESAMK 360
Query: 361 ELDAKMTLLQEKESEIEALQDKVRSLEDEVAKQKEDFHTADKXXXXXXXXXXXXXXXXXA 420
ELDAKMTLLQEKESEIEALQDKVRSLEDEVAKQKEDFHTADK A
Sbjct: 361 ELDAKMTLLQEKESEIEALQDKVRSLEDEVAKQKEDFHTADKEADELRLEIEDLRLKLEA 420
Query: 421 AEEDLNNDKIASSEMETLIEQKNMLAKELEASKAEVEKIKKAMEGQASALHEMSAQLRVA 480
AEEDLNNDKIASSEMETLIEQKNMLAKELEASKAEVEKIKKAMEGQASALHEMSAQLRVA
Sbjct: 421 AEEDLNNDKIASSEMETLIEQKNMLAKELEASKAEVEKIKKAMEGQASALHEMSAQLRVA 480
Query: 481 QEKYLDKQEEIDRARAQVEELNVSLQNTKESYEVMLDEANYEKVCLKKSVERMEAETKSA 540
QEKYLDKQEEIDRARAQVEELNVSLQNTKESYEVMLDEANYEKVCLKKSVERMEAETKSA
Sbjct: 481 QEKYLDKQEEIDRARAQVEELNVSLQNTKESYEVMLDEANYEKVCLKKSVERMEAETKSA 540
Query: 541 SEEWQSKELSFVNSIKKSEEEIINARAQMDKTLEAVKGKESENAELQEKLKHLEAQLMEA 600
SEEWQSKELSFVNSIKKSEEEIINARAQMDKTLEAVKGKESENAELQEKLKHLEAQLMEA
Sbjct: 541 SEEWQSKELSFVNSIKKSEEEIINARAQMDKTLEAVKGKESENAELQEKLKHLEAQLMEA 600
Query: 601 NKTCEEAKAETFQWKEKLLDKENELQNIKQENDDLQAKELVASEKIKELSVLANAKDGAT 660
NKTCEEAKAETFQWKEKLLDKENELQNIKQENDDLQAKELVASEKIKELSVLANAKDGAT
Sbjct: 601 NKTCEEAKAETFQWKEKLLDKENELQNIKQENDDLQAKELVASEKIKELSVLANAKDGAT 660
Query: 661 NGSHKEESNVKGDSEDDEPVMVVAKMWENSKVTDDASSKEKGNDGESEVDLESNTGDSIV 720
NGSHKEESNVKGDSEDDEPVMVVAKMWENSKVTDDASSKEKGNDGESEVDLESNTGDSIV
Sbjct: 661 NGSHKEESNVKGDSEDDEPVMVVAKMWENSKVTDDASSKEKGNDGESEVDLESNTGDSIV 720
Query: 721 DGNGLHSTTASNGNAS 736
DGNGLHSTTASNGNAS
Sbjct: 721 DGNGLHSTTASNGNAS 736
>Os02g0439200 Protein kinase PKN/PRK1, effector domain containing protein
Length = 722
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 260/570 (45%), Positives = 353/570 (61%), Gaps = 60/570 (10%)
Query: 184 DELRTKLASMQSQQEADMAALRSTVEQLEQARYELADAIDAKNAALTQADDAMRASDENA 243
DEL+ +L + + QQEAD AALRS V QLE+AR ELADAIDAKN AL+ ADDA+RA + NA
Sbjct: 166 DELQRRLEATRRQQEADAAALRSMVAQLEEARLELADAIDAKNLALSHADDAIRAGEANA 225
Query: 244 EKIKLLDAEVAHLKGLLDSEVGSSSKGAVEHIRKLEEENSGLKLELEKANVAEQRAXXXX 303
+++LL+AE+ LK +SE+ S K + E RKLE E S L+++L+KA VAE++
Sbjct: 226 AQVELLNAEINRLKDSFNSELESKVKESAEKTRKLEAETSVLRIKLKKAKVAEEKVAELE 285
Query: 304 XXXXXXXXXIADVKKARARSEELLGKWKTKALELEVRLEEADQSNILKGESLESAMKELD 363
+A+ KAR ++ L+G+WK KA E++LE A+QS+ILK ES+ S MKELD
Sbjct: 286 GAVEGLRADVANAIKARREADGLVGEWKKKAQLFEIKLELANQSSILKAESMSSVMKELD 345
Query: 364 AKMTLLQEKESEIEALQDKVRSLEDEVAKQKEDFHT-------ADKXXXXXXXXXXXXXX 416
A LLQ KES+I L DK+ SLE EV +Q ED + A +
Sbjct: 346 AANALLQVKESQIALLHDKIESLEHEVVRQNEDINASGQRVDAAQRGALALRTEIQELRS 405
Query: 417 XXXAAEED----LNNDKIASSEMETLIEQKNMLAKELEASKAEVEKIKKAMEGQASALHE 472
A E++ + + SS++E + E+K+ LAKELE+SK E EK++KAME ASAL E
Sbjct: 406 RLGAMEQEKRGTIKDGSFTSSQIEAICEEKDKLAKELESSKYECEKVRKAMEDMASALQE 465
Query: 473 MSAQLRVAQEKYLDKQEEIDRARAQVEELNVSLQNTKESYEVMLDEANYEKVCLKKSVER 532
MSA+ R +QE YL K++EI+ RA+++ELN+SL NT+++YEVMLDEANYE++CLK VE+
Sbjct: 466 MSAEARESQENYLHKEKEIEHTRAKLQELNISLNNTRDNYEVMLDEANYERICLKNKVEQ 525
Query: 533 MEAETKSASEEWQSKELSFVNSIKKSEEEIINARAQMDKTLEAVKGKESENAELQEKLKH 592
+EAE K+ SEEW+SKELSFV+SI KSEEEI++ R ++ K LE + E+ NA+L+EK++
Sbjct: 526 LEAEAKTTSEEWRSKELSFVSSITKSEEEIMSMRTRLGKALETARDMENRNAQLEEKVRE 585
Query: 593 LEAQLMEANKTCEEAKAETFQWKEKLLDKENELQNIK-----QEND--DLQAKELVASEK 645
LEA L+DK+N + K +END L KE SEK
Sbjct: 586 LEA----------------------LMDKDNNYRGGKDTKAYKENDGLHLHVKESSGSEK 623
Query: 646 IKELSVLANAKDGATNGSHKEESNVKGDSEDDEPVMVVAKMWENSKVTDDASSKEKGNDG 705
IK+L L N +G++E D PV++V+KMWENS SKE+ +DG
Sbjct: 624 IKDLYSLIG--------------NDEGNTEKDGPVLLVSKMWENSYNL----SKER-DDG 664
Query: 706 ESEVDLESNTGDSIVDGNGLH-STTASNGN 734
E EVDL D DGNG ST +N N
Sbjct: 665 EPEVDLLDTDRDIAADGNGSRLSTEKTNSN 694
>Os10g0577100
Length = 943
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 244/470 (51%), Gaps = 39/470 (8%)
Query: 210 QLEQARYELADAIDAKNAALTQADDAMRASDENAEKIKLLDAEVAHLKGLLDSEVGSSSK 269
+L + + ELA A++A N A + +D NA+K L AEV+ L+ SE+ + ++
Sbjct: 183 ELGRVKDELALAVEATNTA-------RQIADANADKAATLAAEVSRLQ----SELETKAE 231
Query: 270 GAVEHIRKLEEENSGLKLELEKANVAEQR-AXXXXXXXXXXXXXIADVKKARARSEELLG 328
A + KLE E SGL+ EL+ A + + IA K+A A +
Sbjct: 232 EATAIVAKLESEASGLRAELQNAEASRKEDVGRAEQLLHGLKVDIAYAKRAEADANLAAQ 291
Query: 329 KWKTKALELEVRLEEADQSNILKGESLESAMKELDAKMTLLQEKESEIEALQDKVRSLED 388
+WKTKA L+ RL E N +SL+S D ++LQ ++S++ L++KV SLE
Sbjct: 292 EWKTKAESLQARLHELSSLNKSNEDSLQSLTSSFDECKSMLQHEQSQVVQLKEKVSSLEK 351
Query: 389 EVAKQKEDFHTADKXXXXXXXXXXXXXXXX-----------XAAEEDLNNDKIASSEMET 437
E + KE F ++ A ++ + N+K +S++
Sbjct: 352 EAREYKECFLETNRRLDVATKESHQLQATIDRLTSQHKLLNEAHQQVVTNEKTVNSQISL 411
Query: 438 LIEQKNMLAKELEASKAEVEKIKKAMEGQASALHEMSAQLRVAQEKYLDKQEEIDRARAQ 497
L + K + +EL+ ++ E +K KKA+E A+AL E+S++ R A+E+ L KQ E+D A+ Q
Sbjct: 412 LSQDKIRIEQELDGARDERDKAKKAVEDLAAALREVSSEAREAKERVLAKQTELDSAQLQ 471
Query: 498 VEELNVSLQNTKESYEVMLDEANYEKVCLKKSVERMEAETKSASEEWQSKELSFVNSIKK 557
+ EL ++N ++ Y++MLDE+ E C+ K+VE++ +E K +++EW SKE FV I++
Sbjct: 472 ISELKAEMKNAQDRYQLMLDESKSEVECISKTVEKLGSEAKISNDEWASKEAGFVEMIRR 531
Query: 558 SEEEIINARAQMDKTLEAVKGKE-------SENAELQEKLKHLEAQLMEAN--------K 602
SEEE+ + +++M + ++ E +E +L +KLK E E + +
Sbjct: 532 SEEEMSSIKSEMSSLMVSLGAAEKQVQELKAERTQLLDKLKQSELTNSEGSSISSTGVQQ 591
Query: 603 TCEEAKAETFQWKEKLLDKENELQNIKQENDDLQAKELVASEKIKELSVL 652
T +E+++ T K+ + KE E+ + E DL+ +E A K ELS L
Sbjct: 592 TADESES-TVGLKDLVSRKEKEVLALNDEVTDLRLRETAALAKANELSKL 640
>Os08g0481100 Conserved hypothetical protein
Length = 434
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 111/215 (51%), Gaps = 19/215 (8%)
Query: 445 LAKELEASKAEVEKIKKAMEGQASALHEMSAQLRVAQEKYLDKQEEIDRARAQVEELNVS 504
L +EL+ + EK KKAM+ A AL E + R A+ K Q E+ AR ++E
Sbjct: 172 LQRELKLAVEAEEKCKKAMDDLAIALKEQTTDARDAKAKLSLAQSELTNARTEMENSKAL 231
Query: 505 LQNTKESYEVMLDEANYEKVCLKKSVERMEAETKSASEEWQS----KELSFVNSIKKSEE 560
L+NT+E +V L+EA A+ K S+E + KE V+ IK E
Sbjct: 232 LKNTEEKLQVALEEA---------------AQLKFESDELAAASKEKERGLVDCIKMFEG 276
Query: 561 EIINARAQMDKTLEAVKGKESENAELQEKLKHLEAQLMEANKTCEEAKAETFQWKEKLLD 620
++I A+ + +K +E+ + EN+ L+E LKH + A ++ E A+AE Q KE + +
Sbjct: 277 DLIKAKEENNKLIESQRVIRDENSRLREMLKHAVCEANVAKESLEIARAENSQLKEDISE 336
Query: 621 KENELQNIKQENDDLQAKELVASEKIKELSVLANA 655
KEN LQ+I Q+ + L+ E A I EL + +A
Sbjct: 337 KENTLQSIIQDYESLKVSESAAQSSIGELKDMIDA 371
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.299 0.117 0.294
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,156,549
Number of extensions: 658320
Number of successful extensions: 5121
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 5036
Number of HSP's successfully gapped: 26
Length of query: 762
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 654
Effective length of database: 11,396,689
Effective search space: 7453434606
Effective search space used: 7453434606
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 160 (66.2 bits)