BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0843500 Os03g0843500|AK101661
         (329 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0843500  Similar to Sarcoplasmic reticulum protein (Wit...   642   0.0  
Os02g0605600  LUC7 related family protein                         435   e-122
Os07g0456400  LUC7 related family protein                          93   3e-19

>Os03g0843500 Similar to Sarcoplasmic reticulum protein (With alternative
           splicing)
          Length = 329

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/329 (95%), Positives = 315/329 (95%)

Query: 1   MDAMRKQLDVLMGANRNGDVREVSRKYYDRDVCRLFLAGLCPHDLFQLTKMDLGPCPKVH 60
           MDAMRKQLDVLMGANRNGDVREVSRKYYDRDVCRLFLAGLCPHDLFQLTKMDLGPCPKVH
Sbjct: 1   MDAMRKQLDVLMGANRNGDVREVSRKYYDRDVCRLFLAGLCPHDLFQLTKMDLGPCPKVH 60

Query: 61  SLQLRKDYEEVKAKGTENYDRELEEMIDRLIVECERKIQRALKRLADEDAKAAIAISVSE 120
           SLQLRKDYEEVKAKGTENYDRELEEMIDRLIVECERKIQRALKRLADEDAKAAIAISVSE
Sbjct: 61  SLQLRKDYEEVKAKGTENYDRELEEMIDRLIVECERKIQRALKRLADEDAKAAIAISVSE 120

Query: 121 VTQTDEVLQLSKEIKEKMKEVDTYDFEGKTDDKIKTMEVVEELRSKRADMQATLLLDAFN 180
           VTQTDEVLQLSKEIKEKMKEVDTYDFEGKTDDKIKTMEVVEELRSKRADMQATLLLDAFN
Sbjct: 121 VTQTDEVLQLSKEIKEKMKEVDTYDFEGKTDDKIKTMEVVEELRSKRADMQATLLLDAFN 180

Query: 181 KDRASLPQPTPTPQMASVPAPAPPDARTQEMINEKIKKAEELGEQGMVDEAQKVMXXXXX 240
           KDRASLPQPTPTPQMASVPAPAPPDARTQEMINEKIKKAEELGEQGMVDEAQKVM     
Sbjct: 181 KDRASLPQPTPTPQMASVPAPAPPDARTQEMINEKIKKAEELGEQGMVDEAQKVMEEAEA 240

Query: 241 XXXXXXXXXPTSDPTKYTAADVRITDQKLRLCDICGAFLSVYDNDRRLADHFGGKLHLGY 300
                    PTSDPTKYTAADVRITDQKLRLCDICGAFLSVYDNDRRLADHFGGKLHLGY
Sbjct: 241 LKKLAARREPTSDPTKYTAADVRITDQKLRLCDICGAFLSVYDNDRRLADHFGGKLHLGY 300

Query: 301 MLIREKLKELQVHSCIPDLPQVKFLGNDN 329
           MLIREKLKELQVHSCIPDLPQVKFLGNDN
Sbjct: 301 MLIREKLKELQVHSCIPDLPQVKFLGNDN 329



>Os02g0605600 LUC7 related family protein
          Length = 418

 Score =  435 bits (1118), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/313 (70%), Positives = 254/313 (81%), Gaps = 3/313 (0%)

Query: 1   MDAMRKQLDVLMGANRNGDVREVSRKYYDRDVCRLFLAGLCPHDLFQLTKMDLGPCPKVH 60
           MDA+RKQLD LMGANRNGDVREVSRKYYDRDVCRLFLAGLCPHDLFQLTKMD+GPCPK+H
Sbjct: 1   MDAIRKQLDQLMGANRNGDVREVSRKYYDRDVCRLFLAGLCPHDLFQLTKMDMGPCPKMH 60

Query: 61  SLQLRKDYEEVKAKGTENYDRELEEMIDRLIVECERKIQRALKRLADEDAKAAIAISVSE 120
           SLQLRK+YEE KAKG +NYDRELEE I+RLI ECERKIQRALKRL ++DAKAAIAIS++E
Sbjct: 61  SLQLRKEYEEAKAKGMDNYDRELEETIERLISECERKIQRALKRLEEDDAKAAIAISITE 120

Query: 121 VTQTDEVLQLSKEIKEKMKEVDTYDFEGKTDDKIKTMEVVEELRSKRADMQATLLLDAFN 180
           VTQ+ EV++ SK+IKEKMKE+D +D EG T+ KI+  E V++L+ +RA+ QA  LL+AFN
Sbjct: 121 VTQSKEVIEFSKQIKEKMKEIDAFDLEGNTEGKIRATEEVDKLKEQRAEEQAKHLLEAFN 180

Query: 181 KDRASLPQP--TPTPQMASVPAPAPPDARTQEMINEKIKKAEELGEQGMVDEAQKVMXXX 238
           KDR SL     T    +   P  A PDARTQEMI+EK+KKAEELGE GM+DEAQK++   
Sbjct: 181 KDRVSLMTSLQTANQSIPPPPVAAAPDARTQEMIDEKLKKAEELGENGMIDEAQKLLDEA 240

Query: 239 XXXXXXXXXXXPTSDPTKYTAADVRITDQKLRLCDICGAFLSVYDNDRRLADHFGGKLHL 298
                      P  D  K +   V+ITDQKLRLCDICGAFLSVYD+DRRLADHFGGKLH+
Sbjct: 241 EALKKLGARPQPVPDSAKMSTH-VQITDQKLRLCDICGAFLSVYDSDRRLADHFGGKLHM 299

Query: 299 GYMLIREKLKELQ 311
           GYMLIREKL ELQ
Sbjct: 300 GYMLIREKLSELQ 312



>Os07g0456400 LUC7 related family protein
          Length = 348

 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 21/197 (10%)

Query: 1   MDAMRKQLDVLMGANRNGDVREVSRKYY------DRDVCRLFLAGLCPHDLFQLTKMDLG 54
           MDA R  LD LMG  R  D+ E  RK +      D DVC  F+A  CPHDLF  TK +LG
Sbjct: 1   MDAQRALLDELMGTAR--DLTEEERKAHKEVRWDDPDVCAAFMARFCPHDLFVNTKSNLG 58

Query: 55  PCPKVHSLQLRKDYEEVKAKGTE--NYDRELEEMIDRLIVECERKIQRALKRLADEDAKA 112
           PC K+H L+L++ +E    + T    ++ EL +  ++L+++ +RKI+R  +RLA +    
Sbjct: 59  PCMKIHDLKLKESFESSPRRETHMRRFEAELAQQCEKLVIDLDRKIRRGRERLAQD---- 114

Query: 113 AIAISVSEVTQTDEVLQLSKE-IKEKMKEVDTYDFEGKTDDKIKTMEVVEELRSKRADMQ 171
            +A+    + +T E L + +E +K+ +++++     GK D+    M  VE L     + +
Sbjct: 115 -VAVPPPVIGKTSEQLSIIEEKVKKLLEQIEELGEAGKVDEAEALMRKVELL-----NAE 168

Query: 172 ATLLLDAFNKDRASLPQ 188
            T L +  +   A LPQ
Sbjct: 169 KTALTNQADNKVAMLPQ 185



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.317    0.134    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,582,293
Number of extensions: 451948
Number of successful extensions: 4523
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4519
Number of HSP's successfully gapped: 3
Length of query: 329
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 228
Effective length of database: 11,762,187
Effective search space: 2681778636
Effective search space used: 2681778636
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 156 (64.7 bits)