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Os02g0605600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : LUC7 related family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0136) R2 : 0.033
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.113 (0.0286) R2dN8 : 0.0426 R2N8 : 0.033
σ : 0.256
deviance : 30.06
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
20.89 0.215 10.7 -0.263 0.145 0.532 0.287 1.13 0.0337 2.07 19.42 4 -- --
21.77 0.217 10.7 -0.439 0.147 0.591 0.0129 -- -0.0137 2.13 20.15 2 -- --
21.11 0.216 10.7 -0.32 0.14 0.539 -- 0.826 0.0196 1.91 19.42 4 -- --
21.71 0.217 10.7 -0.457 0.151 0.574 -- -- -0.0207 1.94 20.45 4 -- --
21.86 0.218 10.7 -0.281 -- 0.391 -- 0.838 0.0462 -- 20.2 3 -- --
26.62 0.242 10.7 -0.342 0.0654 -- 0.188 -- 0.0756 14.9 -- -- -- --
26.74 0.242 10.7 -0.338 0.0675 -- -- -- 0.0768 15.4 -- -- -- --
22.61 0.221 10.7 -0.424 -- 0.432 -- -- 0.00542 -- 20.36 4 -- --
26.37 0.239 10.7 -- 0.102 0.462 -- -- 0.0661 2.87 24.1 2 -- --
26.99 0.243 10.7 -0.341 -- -- -- -- 0.075 -- -- -- -- --
29.75 0.255 10.6 -- 0.0742 -- -- -- 0.114 15.4 -- -- -- --
26.8 0.241 10.7 -- -- 0.356 -- -- 0.0798 -- 24.1 4 -- --
30.06 0.256 10.6 -- -- -- -- -- 0.113 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.78 temperature 30 270 < th dose dependent rect. 23 20
2 20.80 temperature 20 10 > th dose dependent rect. 21 23
3 20.85 temperature 30 90 < th dose dependent rect. 24 23
4 20.87 temperature 20 10 > th dose dependent rect. 6 23
5 20.92 temperature 20 10 > th dose dependent rect. 23 23
8 20.95 temperature 20 10 > th dose dependent no NA NA
13 20.98 temperature 10 10 > th dose dependent sin 1 NA
18 21.02 temperature 20 10 > th dose dependent rect. 1 23
24 21.06 temperature 30 10 < th dose dependent rect. 24 23
30 21.08 temperature 10 10 > th dose dependent no NA NA
32 21.08 temperature 20 10 > th dose dependent rect. 3 23
45 21.16 temperature 20 10 > th dose dependent rect. 17 23
61 21.20 temperature 20 10 > th dose dependent rect. 15 23
75 21.24 temperature 20 10 > th dose dependent rect. 7 17
77 21.24 temperature 10 270 > th dose dependent rect. 3 22
80 21.24 temperature 20 90 > th dose dependent rect. 19 23
105 21.34 temperature 15 270 > th dose dependent rect. 17 22
121 21.36 temperature 20 10 > th dose dependent rect. 13 23
162 21.49 temperature 20 10 > th dose dependent rect. 9 23
231 21.64 temperature 20 1440 > th dose dependent rect. 24 1
232 21.64 temperature 30 10 < th dose dependent rect. 24 19
243 21.66 temperature 25 270 < th dose independent rect. 23 20
255 21.69 temperature 20 10 > th dose dependent rect. 23 21
260 21.70 temperature 30 10 < th dose dependent sin 1 NA
267 21.71 temperature 30 10 < th dose dependent rect. 13 23
276 21.73 temperature 20 720 > th dose dependent rect. 4 4
282 21.73 temperature 30 10 < th dose dependent rect. 9 23
287 21.75 temperature 20 720 > th dose dependent rect. 23 10
306 21.78 temperature 30 10 < th dose dependent no NA NA
320 21.79 temperature 20 10 > th dose dependent rect. 7 15
328 21.79 temperature 30 10 < th dose dependent rect. 11 23
369 21.85 temperature 30 10 < th dose dependent rect. 15 23
384 21.87 temperature 20 1440 > th dose dependent rect. 3 1
385 21.87 temperature 20 10 > th dose dependent rect. 21 19
427 21.91 temperature 30 10 < th dose dependent rect. 17 23
429 21.92 temperature 25 90 < th dose independent rect. 1 22
443 21.93 temperature 30 10 < th dose dependent rect. 3 23
447 21.94 temperature 20 720 > th dose dependent rect. 21 16
462 21.95 temperature 20 720 > th dose dependent rect. 21 14
479 21.96 temperature 20 720 > th dose dependent rect. 23 15
499 21.97 temperature 10 720 > th dose dependent rect. 21 18
504 21.97 temperature 30 10 < th dose dependent rect. 19 23
519 21.98 temperature 30 10 < th dose dependent rect. 7 23
551 22.00 temperature 20 10 > th dose dependent rect. 11 23
558 22.01 temperature 20 10 > th dose dependent rect. 23 17
616 22.05 temperature 25 10 > th dose dependent rect. 1 18
627 22.06 temperature 25 4320 < th dose independent rect. 19 8
664 22.08 temperature 30 10 < th dose dependent rect. 21 23
665 22.09 atmosphere 995 14400 < th dose independent rect. 15 2
706 22.11 atmosphere 995 14400 > th dose independent rect. 12 8
709 22.11 atmosphere 995 14400 > th dose independent rect. 10 10
726 22.11 temperature 10 720 > th dose dependent rect. 23 17
852 22.17 atmosphere 995 14400 < th dose dependent rect. 15 3
887 22.19 atmosphere 995 14400 > th dose independent rect. 15 5
969 22.23 temperature 25 4320 > th dose independent rect. 21 4