BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0605600 Os02g0605600|AK066104
         (418 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0605600  LUC7 related family protein                         601   e-172
Os03g0843500  Similar to Sarcoplasmic reticulum protein (Wit...   427   e-120
Os07g0456400  LUC7 related family protein                          87   3e-17

>Os02g0605600 LUC7 related family protein
          Length = 418

 Score =  601 bits (1549), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 299/326 (91%), Positives = 299/326 (91%)

Query: 1   MDAIRKQLDQLMGANRNGDVREVSRKYYDRDVCRLFLAGLCPHDLFQLTKMDMGPCPKMH 60
           MDAIRKQLDQLMGANRNGDVREVSRKYYDRDVCRLFLAGLCPHDLFQLTKMDMGPCPKMH
Sbjct: 1   MDAIRKQLDQLMGANRNGDVREVSRKYYDRDVCRLFLAGLCPHDLFQLTKMDMGPCPKMH 60

Query: 61  SLQLRKEYEEAKAKGMDNYDRELEETIERLISECERKIQRALKRLEEDDAKAAIAISITE 120
           SLQLRKEYEEAKAKGMDNYDRELEETIERLISECERKIQRALKRLEEDDAKAAIAISITE
Sbjct: 61  SLQLRKEYEEAKAKGMDNYDRELEETIERLISECERKIQRALKRLEEDDAKAAIAISITE 120

Query: 121 VTQSKEVIEFSKQIKEKMKEIDAFDLEGNTEGKIRATEEVDKLKEQRAEEQAKHLLEAFN 180
           VTQSKEVIEFSKQIKEKMKEIDAFDLEGNTEGKIRATEEVDKLKEQRAEEQAKHLLEAFN
Sbjct: 121 VTQSKEVIEFSKQIKEKMKEIDAFDLEGNTEGKIRATEEVDKLKEQRAEEQAKHLLEAFN 180

Query: 181 KDRVSLMTSLQTANQSIXXXXXXXXXXXRTQEMIDEKLKKAEELGENGMIXXXXXXXXXX 240
           KDRVSLMTSLQTANQSI           RTQEMIDEKLKKAEELGENGMI          
Sbjct: 181 KDRVSLMTSLQTANQSIPPPPVAAAPDARTQEMIDEKLKKAEELGENGMIDEAQKLLDEA 240

Query: 241 XXXXXXGARPQPVPDSAKMSTHVQITDQKLRLCDICGAFLSVYDSDRRLADHFGGKLHMG 300
                 GARPQPVPDSAKMSTHVQITDQKLRLCDICGAFLSVYDSDRRLADHFGGKLHMG
Sbjct: 241 EALKKLGARPQPVPDSAKMSTHVQITDQKLRLCDICGAFLSVYDSDRRLADHFGGKLHMG 300

Query: 301 YMLIREKLSELQEEKNKRRKIDRAEH 326
           YMLIREKLSELQEEKNKRRKIDRAEH
Sbjct: 301 YMLIREKLSELQEEKNKRRKIDRAEH 326



>Os03g0843500 Similar to Sarcoplasmic reticulum protein (With alternative
           splicing)
          Length = 329

 Score =  427 bits (1097), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/313 (67%), Positives = 245/313 (78%), Gaps = 3/313 (0%)

Query: 1   MDAIRKQLDQLMGANRNGDVREVSRKYYDRDVCRLFLAGLCPHDLFQLTKMDMGPCPKMH 60
           MDA+RKQLD LMGANRNGDVREVSRKYYDRDVCRLFLAGLCPHDLFQLTKMD+GPCPK+H
Sbjct: 1   MDAMRKQLDVLMGANRNGDVREVSRKYYDRDVCRLFLAGLCPHDLFQLTKMDLGPCPKVH 60

Query: 61  SLQLRKEYEEAKAKGMDNYDRELEETIERLISECERKIQRALKRLEEDDAKAAIAISITE 120
           SLQLRK+YEE KAKG +NYDRELEE I+RLI ECERKIQRALKRL ++DAKAAIAIS++E
Sbjct: 61  SLQLRKDYEEVKAKGTENYDRELEEMIDRLIVECERKIQRALKRLADEDAKAAIAISVSE 120

Query: 121 VTQSKEVIEFSKQIKEKMKEIDAFDLEGNTEGKIRATEEVDKLKEQRAEEQAKHLLEAFN 180
           VTQ+ EV++ SK+IKEKMKE+D +D EG T+ KI+  E V++L+ +RA+ QA  LL+AFN
Sbjct: 121 VTQTDEVLQLSKEIKEKMKEVDTYDFEGKTDDKIKTMEVVEELRSKRADMQATLLLDAFN 180

Query: 181 KDRVSLMTSLQTANQSIXXXXXXXXXXXRTQEMIDEKLKKAEELGENGMIXXXXXXXXXX 240
           KDR SL     T    +           RTQEMI+EK+KKAEELGE GM+          
Sbjct: 181 KDRASLPQP--TPTPQMASVPAPAPPDARTQEMINEKIKKAEELGEQGMVDEAQKVMEEA 238

Query: 241 XXXXXXGARPQPVPDSAKMS-THVQITDQKLRLCDICGAFLSVYDSDRRLADHFGGKLHM 299
                  AR +P  D  K +   V+ITDQKLRLCDICGAFLSVYD+DRRLADHFGGKLH+
Sbjct: 239 EALKKLAARREPTSDPTKYTAADVRITDQKLRLCDICGAFLSVYDNDRRLADHFGGKLHL 298

Query: 300 GYMLIREKLSELQ 312
           GYMLIREKL ELQ
Sbjct: 299 GYMLIREKLKELQ 311



>Os07g0456400 LUC7 related family protein
          Length = 348

 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 18/149 (12%)

Query: 1   MDAIRKQLDQLMGANRNGDVREVSRK------YYDRDVCRLFLAGLCPHDLFQLTKMDMG 54
           MDA R  LD+LMG  R  D+ E  RK      + D DVC  F+A  CPHDLF  TK ++G
Sbjct: 1   MDAQRALLDELMGTAR--DLTEEERKAHKEVRWDDPDVCAAFMARFCPHDLFVNTKSNLG 58

Query: 55  PCPKMHSLQLRKEYEEA--KAKGMDNYDRELEETIERLISECERKIQRALKRLEEDDAKA 112
           PC K+H L+L++ +E +  +   M  ++ EL +  E+L+ + +RKI+R  +RL +D    
Sbjct: 59  PCMKIHDLKLKESFESSPRRETHMRRFEAELAQQCEKLVIDLDRKIRRGRERLAQD---- 114

Query: 113 AIAISITEVTQSKEVIEFSKQIKEKMKEI 141
            +A+    + ++ E +     I+EK+K++
Sbjct: 115 -VAVPPPVIGKTSEQLSI---IEEKVKKL 139



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.316    0.132    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,177,871
Number of extensions: 341177
Number of successful extensions: 1381
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1375
Number of HSP's successfully gapped: 3
Length of query: 418
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 315
Effective length of database: 11,657,759
Effective search space: 3672194085
Effective search space used: 3672194085
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)