BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0794200 Os03g0794200|J065101F23
(193 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0794200 GCN5-related N-acetyltransferase domain contai... 328 2e-90
Os03g0794300 GCN5-related N-acetyltransferase domain contai... 232 1e-61
Os03g0794400 GCN5-related N-acetyltransferase domain contai... 181 2e-46
Os03g0664800 GCN5-related N-acetyltransferase domain contai... 146 7e-36
Os03g0665000 GCN5-related N-acetyltransferase domain contai... 146 8e-36
Os01g0358866 86 2e-17
Os04g0259100 71 5e-13
>Os03g0794200 GCN5-related N-acetyltransferase domain containing protein
Length = 193
Score = 328 bits (841), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/193 (87%), Positives = 168/193 (87%)
Query: 1 MDRSQEPPHAAAARGAVEVSLRRFDLADVDAMMVWASDPQVAAVCRWEPYESTEPLLAYL 60
MDRSQEPPHAAAARGAVEVSLRRFDLADVDAMMVWASDPQVAAVCRWEPYESTEPLLAYL
Sbjct: 1 MDRSQEPPHAAAARGAVEVSLRRFDLADVDAMMVWASDPQVAAVCRWEPYESTEPLLAYL 60
Query: 61 RDTVLPHPWFRAICVXXXXXXXXXXXXRPVGAVSVSPTADACRAELGYVVARAHWGKGXX 120
RDTVLPHPWFRAICV RPVGAVSVSPTADACRAELGYVVARAHWGKG
Sbjct: 61 RDTVLPHPWFRAICVAAAFDGDGGGEDRPVGAVSVSPTADACRAELGYVVARAHWGKGVA 120
Query: 121 XXXXXXXXXXXFGEVEGLERVEALVDVRNAASQRVLEKAGFRREAVLRSYCVLKGEVRDM 180
FGEVEGLERVEALVDVRNAASQRVLEKAGFRREAVLRSYCVLKGEVRDM
Sbjct: 121 TAAVKRVVAAVFGEVEGLERVEALVDVRNAASQRVLEKAGFRREAVLRSYCVLKGEVRDM 180
Query: 181 VIYSFISTDPLVS 193
VIYSFISTDPLVS
Sbjct: 181 VIYSFISTDPLVS 193
>Os03g0794300 GCN5-related N-acetyltransferase domain containing protein
Length = 177
Score = 232 bits (592), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/176 (68%), Positives = 134/176 (76%), Gaps = 2/176 (1%)
Query: 17 VEVSLRRFDLADVDAMMVWASDPQVAAVCRWEPYESTEPLLAYLRDTVLPHPWFRAICVX 76
+EV+LRRF+L+DVDAMM WASDP VAA CRWEPY+STEPLLAYLRDTVLPHPWFRAIC+
Sbjct: 1 MEVTLRRFELSDVDAMMAWASDPAVAAFCRWEPYQSTEPLLAYLRDTVLPHPWFRAICL- 59
Query: 77 XXXXXXXXXXXRPVGAVSVSPTADACRAELGYVVARAHWGKGXXXXXXXXXXXXXF-GEV 135
RPVGAVS++PTADACR ELGYVVARAHWGKG GEV
Sbjct: 60 ATGAGAGDGDGRPVGAVSLAPTADACRGELGYVVARAHWGKGVATAAVRRAVAAVLGGEV 119
Query: 136 EGLERVEALVDVRNAASQRVLEKAGFRREAVLRSYCVLKGEVRDMVIYSFISTDPL 191
GL RVEALVDV N ASQRV+EKAGFRRE VLR + KG VRD+V+YSF+S+D L
Sbjct: 120 SGLARVEALVDVDNRASQRVVEKAGFRREGVLRRHYWHKGRVRDLVMYSFVSSDQL 175
>Os03g0794400 GCN5-related N-acetyltransferase domain containing protein
Length = 169
Score = 181 bits (460), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 130/174 (74%), Gaps = 9/174 (5%)
Query: 19 VSLRRFDLADVDAMMVWASDPQVAAVCRWEPYESTEPLLAYLRDTVLPHPWFRAICVXXX 78
V+LRRF+LAD DAMM WASDP+V A WEPYES + L A++RDTVLPHPWFRAIC+
Sbjct: 4 VTLRRFELADADAMMAWASDPEVTAFMTWEPYESVDSLRAFIRDTVLPHPWFRAICLAGD 63
Query: 79 XXXXXXXXXRPVGAVSVSPTADACRAELGYVVARAHWGKGXXXXXXXXXXXXXFGEVEGL 138
GAVSV+PTAD CRAE+ VARAHWGKG F +++G+
Sbjct: 64 GDG---------GAVSVTPTADRCRAEVAVAVARAHWGKGVATAALRRALAAAFADLDGV 114
Query: 139 ERVEALVDVRNAASQRVLEKAGFRREAVLRSYCVLKGEVRDMVIYSFISTDPLV 192
ERVEALVDV NAAS+R LEKAGF++EAVLRSYCV+KG++RDMVIYSFISTDPLV
Sbjct: 115 ERVEALVDVGNAASRRALEKAGFQQEAVLRSYCVVKGQLRDMVIYSFISTDPLV 168
>Os03g0664800 GCN5-related N-acetyltransferase domain containing protein
Length = 203
Score = 146 bits (369), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 101/187 (54%), Gaps = 24/187 (12%)
Query: 19 VSLRRFDLADVDAMMVWASDPQVAAVCRWEPYESTEPLLAYLRDTVLPHPWFRAICVXXX 78
V+LR F AD +A+ WASDP+V R + Y + Y+ D VLPHPW+RAICV
Sbjct: 10 VTLREFTEADAEALFAWASDPRVVRFQRRDAYSHVDEARRYIVDKVLPHPWYRAICVAGA 69
Query: 79 XXXXXXXXXRPVGAVSVSPTAD----------------ACRAELGYVVARAHWGKGXXXX 122
RPVG++SV P D CRA +GY VA AHWG+G
Sbjct: 70 D--------RPVGSISVKPADDLPLPEPESETGRLRSGCCRASVGYRVAHAHWGRGVATR 121
Query: 123 XXXXXXXXXFGEVEGLERVEALVDVRNAASQRVLEKAGFRREAVLRSYCVLKGEVRDMVI 182
E LER+EA+ DV N ASQRVLEKAGF RE VLR Y VLKG RDMV+
Sbjct: 122 AVRAVAEAVLAEWPWLERLEAVADVENPASQRVLEKAGFAREGVLRRYVVLKGRPRDMVM 181
Query: 183 YSFISTD 189
+S + D
Sbjct: 182 FSRVRAD 188
>Os03g0665000 GCN5-related N-acetyltransferase domain containing protein
Length = 214
Score = 146 bits (369), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 103/177 (58%), Gaps = 6/177 (3%)
Query: 16 AVEVSLRRFDLADVDAMMVWASDPQVAAVCRWEPYESTEPLLAYLRDTVLPHPWFRAICV 75
AV V+LR LAD D M WASD +V R + E +A +RDTVL HPWFRAICV
Sbjct: 18 AVAVTLRPLGLADADDFMAWASDERVMRFLRRPLCAAREQAVAQIRDTVLGHPWFRAICV 77
Query: 76 XXXXXXXXXXXXRPVGAVSVSPTAD--ACRAELGYVVARAHWGKGXXXXXXXXXXXXXFG 133
RPVG VSV P AD RA LGY ++ WG+G F
Sbjct: 78 DDDDAGAGR---RPVGQVSVWPYADEGGHRANLGYALSHGLWGRGIATAAITMVVARVFD 134
Query: 134 EVEGLERVEALVDVRNAASQRVLEKAGFRREAVLRSYCVLK-GEVRDMVIYSFISTD 189
E+ GLER+EA+ DV N SQR LEKAGFR+E VLR Y V + GEV D VIYSF+++D
Sbjct: 135 ELPGLERLEAVTDVENVRSQRALEKAGFRKEGVLRRYIVRRSGEVMDAVIYSFLASD 191
>Os01g0358866
Length = 142
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 48/51 (94%)
Query: 142 EALVDVRNAASQRVLEKAGFRREAVLRSYCVLKGEVRDMVIYSFISTDPLV 192
EALVDV NAAS+R LEKAGF++EAVL +YCV+KG++RDMVIYSFISTDPLV
Sbjct: 91 EALVDVDNAASRRALEKAGFQQEAVLCNYCVVKGQLRDMVIYSFISTDPLV 141
>Os04g0259100
Length = 333
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 54/118 (45%), Gaps = 23/118 (19%)
Query: 59 YLRDTVLPHPWFRAICVXXXXXXXXXXXXRPVGAVSVSPTAD---------------ACR 103
Y+ D VLPHPW+RAICV RPVG++SV+P D CR
Sbjct: 203 YIVDKVLPHPWYRAICV--------AGADRPVGSISVNPADDLREPDESETGGLRSRCCR 254
Query: 104 AELGYVVARAHWGKGXXXXXXXXXXXXXFGEVEGLERVEALVDVRNAASQRVLEKAGF 161
A +GY VA HWG+G E LER+ A+ DV N A +R K F
Sbjct: 255 ASVGYRVAHVHWGRGVVTRAVRATAEVVSAEWPWLERLAAVADVENPAGRRAAAKRYF 312
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.135 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,694,096
Number of extensions: 185057
Number of successful extensions: 361
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 351
Number of HSP's successfully gapped: 7
Length of query: 193
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 98
Effective length of database: 12,075,471
Effective search space: 1183396158
Effective search space used: 1183396158
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 153 (63.5 bits)