Os03g0794300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : GCN5-related N-acetyltransferase domain containing protein.
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Os03g0794300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : GCN5-related N-acetyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.25 | 0.388 | 10.8 | 0.137 | 1.06 | -1.08 | 1.33 | -0.18 | 0.0529 | 4.06 | 24.1 | 10 | -- | -- |
| 68.26 | 0.388 | 10.8 | 0.115 | 1.05 | -1.06 | 1.28 | -- | 0.0484 | 4.07 | 24.1 | 10 | -- | -- |
| 72.45 | 0.399 | 10.8 | 0.0349 | 1.06 | -0.999 | -- | 0.514 | 0.0293 | 4.17 | 24.1 | 7 | -- | -- |
| 72.89 | 0.398 | 10.8 | 0.1 | 1.06 | -1.05 | -- | -- | 0.0425 | 4.15 | 24.1 | 8 | -- | -- |
| 129.81 | 0.534 | 10.8 | 0.138 | -- | -0.546 | -- | 0.823 | 0.123 | -- | 23.81 | 2 | -- | -- |
| 84.43 | 0.431 | 10.7 | 0.348 | 0.943 | -- | 1.26 | -- | 0.221 | 4.54 | -- | -- | -- | -- |
| 88.63 | 0.441 | 10.7 | 0.34 | 0.955 | -- | -- | -- | 0.214 | 4.69 | -- | -- | -- | -- |
| 130.88 | 0.535 | 10.8 | 0.243 | -- | -0.649 | -- | -- | 0.149 | -- | 23.4 | 2 | -- | -- |
| 73.13 | 0.398 | 10.8 | -- | 1.07 | -1.09 | -- | -- | 0.0259 | 4.14 | 24.1 | 8 | -- | -- |
| 137.02 | 0.547 | 10.7 | 0.376 | -- | -- | -- | -- | 0.239 | -- | -- | -- | -- | -- |
| 91.68 | 0.448 | 10.7 | -- | 0.961 | -- | -- | -- | 0.176 | 4.68 | -- | -- | -- | -- |
| 132.32 | 0.538 | 10.8 | -- | -- | -0.733 | -- | -- | 0.112 | -- | 23.4 | 2 | -- | -- |
| 140.76 | 0.554 | 10.7 | -- | -- | -- | -- | -- | 0.197 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.33 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 24 | 21 |
| 2 | 65.35 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 3 | 20 |
| 5 | 65.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 6 | 65.74 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 16 |
| 7 | 65.89 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 8 | 65.89 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 10 | 66.01 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 1 | 19 |
| 11 | 66.09 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 20 |
| 13 | 66.11 | temperature | 25 | 10 | < th | dose dependent | sin | 14 | NA |
| 18 | 66.21 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 25 | 66.31 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 12 |
| 32 | 66.38 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 12 |
| 38 | 66.42 | temperature | 25 | 10 | < th | dose dependent | rect. | 6 | 22 |
| 42 | 66.47 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 98 | 66.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 5 |
| 117 | 67.08 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 24 | 23 |
| 194 | 67.92 | temperature | 20 | 10 | > th | dose independent | rect. | 3 | 20 |
| 235 | 68.27 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 13 |
| 241 | 68.31 | wind | 1 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 252 | 68.41 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 279 | 68.60 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 303 | 68.75 | radiation | 40 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 308 | 68.77 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 313 | 68.79 | radiation | 40 | 30 | < th | dose dependent | rect. | 3 | 20 |
| 314 | 68.79 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 319 | 68.84 | temperature | 20 | 270 | > th | dose independent | rect. | 24 | 21 |
| 323 | 68.85 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 329 | 68.90 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 335 | 68.93 | temperature | 25 | 270 | < th | dose independent | rect. | 19 | 6 |
| 346 | 68.95 | radiation | 40 | 270 | < th | dose dependent | rect. | 1 | 11 |
| 348 | 68.96 | temperature | 25 | 270 | < th | dose independent | rect. | 20 | 4 |
| 355 | 68.97 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 359 | 68.98 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 362 | 69.00 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 363 | 69.01 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 368 | 69.02 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 383 | 69.09 | temperature | 20 | 10 | > th | dose independent | rect. | 24 | 23 |
| 385 | 69.10 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 414 | 69.24 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 419 | 69.26 | temperature | 25 | 90 | < th | dose independent | rect. | 22 | 5 |
| 424 | 69.27 | wind | 7 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 442 | 69.32 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 452 | 69.35 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 1 |
| 476 | 69.40 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 508 | 69.54 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 15 |
| 523 | 69.59 | radiation | 20 | 270 | < th | dose independent | rect. | 24 | 20 |
| 527 | 69.60 | radiation | 40 | 270 | < th | dose independent | rect. | 24 | 21 |
| 550 | 69.66 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 595 | 69.80 | temperature | 25 | 10 | < th | dose independent | rect. | 22 | 5 |
| 629 | 69.89 | radiation | 20 | 30 | < th | dose independent | rect. | 3 | 20 |
| 710 | 70.09 | humidity | 60 | 270 | > th | dose dependent | rect. | 24 | 20 |
| 734 | 70.16 | radiation | 20 | 270 | < th | dose independent | rect. | 24 | 12 |
| 754 | 70.20 | radiation | 40 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 759 | 70.21 | humidity | 60 | 270 | > th | dose dependent | rect. | 24 | 11 |
| 856 | 70.43 | humidity | 80 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 867 | 70.46 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 942 | 70.62 | humidity | 80 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 952 | 70.64 | humidity | 70 | 270 | > th | dose dependent | rect. | 24 | 14 |
| 982 | 70.70 | humidity | 60 | 30 | > th | dose dependent | rect. | 3 | 20 |