BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0788700 Os03g0788700|AK073842
         (479 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0788700  Beta-Ig-H3/fasciclin domain containing protein      841   0.0  
Os03g0788600  Beta-Ig-H3/fasciclin domain containing protein      611   e-175
Os07g0160600  Beta-Ig-H3/fasciclin domain containing protein      558   e-159

>Os03g0788700 Beta-Ig-H3/fasciclin domain containing protein
          Length = 479

 Score =  841 bits (2173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/479 (90%), Positives = 434/479 (90%)

Query: 1   MGAPVCGALVCFFVLLVARAAAETAPVERPTLPSADVAIDXXXXXXXXXXXXXXXXXXXX 60
           MGAPVCGALVCFFVLLVARAAAETAPVERPTLPSADVAID                    
Sbjct: 1   MGAPVCGALVCFFVLLVARAAAETAPVERPTLPSADVAIDGNGNGARAGAGKAAGAGAVG 60

Query: 61  XXIVSNSVLVALLDSRYTEMAELVEKALLLQALEDAVAEHNVTILAPRNEALERDIDPEF 120
             IVSNSVLVALLDSRYTEMAELVEKALLLQALEDAVAEHNVTILAPRNEALERDIDPEF
Sbjct: 61  GGIVSNSVLVALLDSRYTEMAELVEKALLLQALEDAVAEHNVTILAPRNEALERDIDPEF 120

Query: 121 KRFLLEPRNLNSLQSLLLFHVLPARLPSGSWPAAATHPTLAGEDVELAAADGGGGMRVAH 180
           KRFLLEPRNLNSLQSLLLFHVLPARLPSGSWPAAATHPTLAGEDVELAAADGGGGMRVAH
Sbjct: 121 KRFLLEPRNLNSLQSLLLFHVLPARLPSGSWPAAATHPTLAGEDVELAAADGGGGMRVAH 180

Query: 181 AAVSRPDAVVRTDGVIHGIDRLLVPRSVQDEFNRRRSLADISAMPPTAAPEVDPRTDRLK 240
           AAVSRPDAVVRTDGVIHGIDRLLVPRSVQDEFNRRRSLADISAMPPTAAPEVDPRTDRLK
Sbjct: 181 AAVSRPDAVVRTDGVIHGIDRLLVPRSVQDEFNRRRSLADISAMPPTAAPEVDPRTDRLK 240

Query: 241 KPAPPGDSPVLPISDATVPDPSVALASEPSDHYDGDSQVKDFIQTLLKYGGYNELADIFV 300
           KPAPPGDSPVLPISDATVPDPSVALASEPSDHYDGDSQVKDFIQTLLKYGGYNELADIFV
Sbjct: 241 KPAPPGDSPVLPISDATVPDPSVALASEPSDHYDGDSQVKDFIQTLLKYGGYNELADIFV 300

Query: 301 NLTSLATELAQLVSEGYALTVLAPNDEAMARLTADQLSEPGSPENILYYHMIPEYQTEES 360
           NLTSLATELAQLVSEGYALTVLAPNDEAMARLTADQLSEPGSPENILYYHMIPEYQTEES
Sbjct: 301 NLTSLATELAQLVSEGYALTVLAPNDEAMARLTADQLSEPGSPENILYYHMIPEYQTEES 360

Query: 361 MYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIFADGRISVQGIDA 420
           MYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIFADGRISVQGIDA
Sbjct: 361 MYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIFADGRISVQGIDA 420

Query: 421 VLFXXXXXXXXXXXXXXXXXXXXXXXGVSKIKHRRGKLLEAACQMVGILGQRSQFTRCQ 479
           VLF                       GVSKIKHRRGKLLEAACQMVGILGQRSQFTRCQ
Sbjct: 421 VLFPPAETKTKTKPATARIRTAPAITGVSKIKHRRGKLLEAACQMVGILGQRSQFTRCQ 479



>Os03g0788600 Beta-Ig-H3/fasciclin domain containing protein
          Length = 474

 Score =  611 bits (1576), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 352/487 (72%), Positives = 374/487 (76%), Gaps = 21/487 (4%)

Query: 1   MGAPVCGALVCFFVLLVARAAAETAPVERPTLPSADVAIDXXXXXXXXXXXXXXXXXXXX 60
           MGAPV GALV   +LL+A AAAETAP E PTLPSA                         
Sbjct: 1   MGAPVRGALVF--LLLLAGAAAETAP-EEPTLPSAAADG--------AASSGTTSGAGAG 49

Query: 61  XXIVSNSVLVALLDSRYTEMAELVEKALLLQALEDAVAEHNVTILAPRNEALERDIDPEF 120
             I SNSVLVALLDS YTE+AELVEKALLLQ LEDAV +HNVTI APRNEALERD+DPEF
Sbjct: 50  TGINSNSVLVALLDSHYTELAELVEKALLLQTLEDAVGKHNVTIFAPRNEALERDLDPEF 109

Query: 121 KRFLLEPRNLNSLQSLLLFHVLPARLPSGSWPAAATHPTLAGEDVELAAADGGGGMRVAH 180
           KRFLLEPRNL SLQSLLLFHVLPARLPSGSW +A +HPTL+GE+VELAAA   G MRVAH
Sbjct: 110 KRFLLEPRNLKSLQSLLLFHVLPARLPSGSW-SAVSHPTLSGEEVELAAAANDGAMRVAH 168

Query: 181 AAVSRPDAVVRTDGVIHGIDRLLVPRSVQDEFNRRRSLADISAMPPTAAPEVDPRTDRLK 240
           AAV+RPDAV+R DGVIHGI+RLLVPRSVQ++FNRRRSLADISA+ PT APEVDPRT RLK
Sbjct: 169 AAVTRPDAVLRPDGVIHGIERLLVPRSVQEDFNRRRSLADISAVLPTGAPEVDPRTHRLK 228

Query: 241 KPAPPGDSPVLP---ISDATVPDPSVALASEP-----SDHYDGDSQVKDFIQTLLKYGGY 292
           KPAPP      P   I DA  P PS+A A  P       H+DG SQVKDFIQTLL YGGY
Sbjct: 229 KPAPPVPPGAPPVLPIWDAMAPGPSIAPAPAPGPGSGKHHFDGHSQVKDFIQTLLLYGGY 288

Query: 293 NELADIFVNLTSLATELAQLVSEGYALTVLAPNDEAMARLTADQLSEPGSPENILYYHMI 352
           NELADI VNLTSLATE+ +LVSEGY LTVLAPNDEAMARLT DQLSEPGSPENILYYHMI
Sbjct: 289 NELADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHMI 348

Query: 353 PEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIFADGR 412
           PEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDI+ DGR
Sbjct: 349 PEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIYTDGR 408

Query: 413 ISVQGIDAVLFXXXXXXXXXXXXXXXXXXXXXXXGVSKIKHRRGKLLEAACQMVGILGQR 472
           I+VQGIDAVLF                          K K RRGKLLEA CQM GILGQR
Sbjct: 409 IAVQGIDAVLFPPDDTKTAPDTAPVRRAPAVTGT-RKKNKLRRGKLLEATCQMAGILGQR 467

Query: 473 SQFTRCQ 479
            +F  CQ
Sbjct: 468 LRFASCQ 474



>Os07g0160600 Beta-Ig-H3/fasciclin domain containing protein
          Length = 479

 Score =  558 bits (1438), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 308/434 (70%), Positives = 334/434 (76%), Gaps = 21/434 (4%)

Query: 63  IVSNSVLVALLDSRYTEMAELVEKALLLQALEDAVAEHNVTILAPRNEALERDIDPEFKR 122
           + SNSVLVALLDS YTE+AELVEKALLLQ LEDAV + NVTI APRNEALERD+DPEF+R
Sbjct: 50  VNSNSVLVALLDSHYTELAELVEKALLLQTLEDAVGKGNVTIFAPRNEALERDLDPEFRR 109

Query: 123 FLLEPRNLNSLQSLLLFHVLPARLPSGSWPAAAT---HPTLAGEDVELAAADGGGGMRVA 179
           FLLEPRNL SLQ LLLFHVLPARL +    +      HPTL+GE V+L+A+     MRV 
Sbjct: 110 FLLEPRNLRSLQRLLLFHVLPARLHASDSSSPDFPSSHPTLSGERVDLSASP----MRVG 165

Query: 180 HAAVSRPDAVVRTDGVIHGIDRLLVPRSVQDEFNRRRSLADISAMPPTAAPEVDPRTDRL 239
            AAV+RPDAVVR DGVIHGI+RLLVPRSVQ++FNRRRSLA ISA+ PT APEVDPRT RL
Sbjct: 166 AAAVTRPDAVVRPDGVIHGIERLLVPRSVQEDFNRRRSLAAISAVLPTGAPEVDPRTHRL 225

Query: 240 KKPAPPGDSPVLP---ISDATVPDPSVALASEP-----SDHYDGDSQVKDFIQTLLKYGG 291
           KKPAPP      P   I DA  P PS+A A  P       H+DG SQVKDFIQTLL YGG
Sbjct: 226 KKPAPPVPPGAPPVLPIWDAMAPGPSIAPAPAPGPGSGKHHFDGHSQVKDFIQTLLLYGG 285

Query: 292 YNELADIFVNLTSLATELAQLVSEGYALTVLAPNDEAMARLTADQLSEPGSPENILYYHM 351
           YNELADI VNLTSLATE+ +LVSEGY LTVLAPNDEAMARLT DQLSEPGSPENILYYHM
Sbjct: 286 YNELADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHM 345

Query: 352 IPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIFADG 411
           IPEYQTEESMYNAVRRFGKVRYDTLRLP+KV AREADGSVKFGHGEGSAYLFDPDI+ DG
Sbjct: 346 IPEYQTEESMYNAVRRFGKVRYDTLRLPNKVTAREADGSVKFGHGEGSAYLFDPDIYTDG 405

Query: 412 RISVQGIDAVLF------XXXXXXXXXXXXXXXXXXXXXXXGVSKIKHRRGKLLEAACQM 465
           RISVQGIDAVLF                               SK K RRGKLLE ACQ+
Sbjct: 406 RISVQGIDAVLFPPKDTATGGEGSGSGSSGAAPARKAPAVTAHSKSKLRRGKLLEGACQV 465

Query: 466 VGILGQRSQFTRCQ 479
           +G LG+RS+F  CQ
Sbjct: 466 MGFLGRRSRFASCQ 479



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.135    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,639,449
Number of extensions: 692340
Number of successful extensions: 3469
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3454
Number of HSP's successfully gapped: 3
Length of query: 479
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 374
Effective length of database: 11,553,331
Effective search space: 4320945794
Effective search space used: 4320945794
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)