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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0788700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Beta-Ig-H3/fasciclin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.65 (0.0265) R2 : 0.163
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.645 (0.0684) R2dC : 0.164 R2C : 0.163
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00882 (0.0557) R2dN8 : 5.95e-05 R2N8 : -0.000896
σ : 0.499
deviance : 113.82
__
_____
C
peak time of C : 7.44
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
95.88 0.46 3.64 -0.448 0.853 0.563 -1.55 -1.68 -0.0043 9.7 25.79 125 -- --
101.29 0.469 3.65 -0.477 0.805 0.506 -0.396 -- -0.0156 9.24 35.03 99 -- --
99.95 0.466 3.65 -0.475 0.8 0.592 -- -0.71 -0.0113 10.2 22.9 213 -- --
101.56 0.469 3.65 -0.496 0.785 0.573 -- -- -0.00942 9.17 53.6 99 -- --
101.93 0.47 3.66 -0.363 -- 0.951 -- -1.47 0.0188 -- 3.856 887 -- --
104.73 0.48 3.66 -0.493 0.652 -- -0.941 -- -0.051 7.13 -- -- -- --
106.96 0.484 3.66 -0.51 0.649 -- -- -- -0.048 7.39 -- -- -- --
105.98 0.479 3.67 -0.44 -- 0.918 -- -- 0.00306 -- 3.669 899 -- --
108.02 0.484 3.63 -- 0.825 0.655 -- -- 0.0468 9.41 50.48 93 -- --
129.41 0.532 3.68 -0.5 -- -- -- -- -0.0374 -- -- -- -- --
113.82 0.499 3.65 -- 0.645 -- -- -- 0.00882 7.44 -- -- -- --
111.15 0.491 3.66 -- -- 0.942 -- -- 0.0507 -- 2.983 899 -- --
136 0.544 3.66 -- -- -- -- -- 0.018 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 90.34 humidity 50.0 30 > th dose dependent rect. 5 11
4 90.89 wind 9.0 30 < th dose dependent rect. 9 20
5 90.97 humidity 60.0 30 > th dose dependent rect. 5 4
18 91.54 radiation 20.0 270 < th dose dependent rect. 2 13
24 91.78 humidity 90.0 270 > th dose independent rect. 4 2
28 91.90 radiation 40.0 30 < th dose dependent rect. 5 4
31 91.91 radiation 30.0 30 < th dose independent rect. 5 4
33 91.92 humidity 70.0 30 > th dose independent rect. 5 4
40 92.12 radiation 1.0 270 < th dose independent rect. 4 11
57 92.41 temperature 30.0 30 < th dose dependent rect. 5 4
58 92.42 humidity 80.0 270 > th dose dependent rect. 5 1
67 92.49 atmosphere 995.0 30 > th dose independent rect. 9 20
71 92.51 wind 9.0 30 < th dose independent rect. 9 20
76 92.61 temperature 25.0 90 < th dose independent rect. 5 2
77 92.61 wind 3.0 30 < th dose independent rect. 9 20
90 92.72 radiation 1.0 270 < th dose independent rect. 2 13
95 92.77 radiation 1.0 270 < th dose independent rect. 5 1
104 92.92 wind 9.0 30 < th dose independent rect. 5 4
105 92.92 temperature 10.0 30 > th dose independent rect. 5 4
107 92.92 temperature 30.0 30 < th dose independent rect. 5 4
108 92.92 humidity 50.0 30 > th dose independent rect. 5 4
110 92.92 atmosphere 995.0 30 > th dose independent rect. 5 4
111 92.92 atmosphere 1015.0 30 < th dose independent rect. 5 4
113 92.92 temperature 10.0 30 > th dose independent rect. 9 20
114 92.93 radiation 40.0 90 < th dose dependent rect. 11 22
115 92.94 precipitation 0.1 30 < th dose independent rect. 5 4
117 92.94 precipitation 0.1 30 < th dose dependent rect. 5 4
141 93.08 radiation 1.0 270 < th dose dependent rect. 4 11
142 93.09 radiation 10.0 270 < th dose dependent rect. 5 1
156 93.17 radiation 40.0 90 < th dose independent rect. 11 22
160 93.18 precipitation 0.1 30 < th dose independent rect. 9 20
161 93.18 wind 9.0 30 < th dose dependent rect. 5 4
163 93.18 humidity 50.0 270 > th dose dependent rect. 2 13
164 93.18 precipitation 0.1 30 < th dose dependent rect. 9 20
169 93.22 atmosphere 995.0 270 > th dose independent rect. 6 22
173 93.28 radiation 20.0 90 < th dose dependent rect. 5 10
182 93.34 radiation 1.0 270 > th dose independent sin 2 NA
187 93.36 radiation 20.0 270 < th dose dependent sin 5 NA
193 93.38 wind 9.0 270 < th dose independent rect. 6 23
220 93.52 wind 9.0 270 < th dose dependent rect. 6 22
222 93.54 radiation 20.0 90 < th dose independent rect. 4 11
235 93.59 atmosphere 1015.0 30 < th dose dependent rect. 5 4
236 93.59 humidity 60.0 30 > th dose dependent rect. 5 7
239 93.61 humidity 50.0 1440 > th dose independent rect. 5 5
264 93.70 radiation 1.0 270 < th dose independent sin 3 NA
266 93.70 radiation 20.0 10 < th dose independent rect. 5 10
277 93.74 radiation 30.0 30 < th dose independent rect. 2 7
278 93.75 humidity 70.0 30 > th dose independent rect. 2 7
296 93.83 atmosphere 1010.0 270 < th dose independent rect. 5 1
297 93.83 temperature 10.0 1440 > th dose independent rect. 5 5
300 93.83 atmosphere 995.0 1440 > th dose independent rect. 5 5
301 93.83 atmosphere 1015.0 1440 < th dose independent rect. 5 5
303 93.83 temperature 10.0 1440 > th dose independent rect. 10 19
313 93.86 wind 7.0 270 < th dose independent rect. 5 1
315 93.86 temperature 10.0 270 > th dose independent rect. 5 1
318 93.86 humidity 50.0 270 > th dose independent rect. 5 1
321 93.86 atmosphere 995.0 270 > th dose independent rect. 5 1
326 93.86 temperature 10.0 270 > th dose independent rect. 6 23
335 93.90 radiation 1.0 270 > th dose independent rect. 6 10
340 93.92 precipitation 0.1 270 < th dose independent rect. 5 1
341 93.92 precipitation 0.1 270 < th dose dependent rect. 5 1
355 93.99 humidity 70.0 30 > th dose independent rect. 5 11
357 94.00 wind 9.0 270 < th dose dependent rect. 7 19
368 94.04 atmosphere 1000.0 30 > th dose independent rect. 9 17
371 94.05 humidity 50.0 4320 > th dose independent rect. 3 7
394 94.07 radiation 20.0 90 < th dose independent rect. 11 22
403 94.10 radiation 40.0 270 < th dose dependent rect. 11 19
407 94.12 radiation 1.0 90 > th dose dependent rect. 9 2
413 94.15 wind 9.0 30 < th dose independent rect. 9 17
419 94.16 atmosphere 995.0 270 > th dose independent rect. 6 20
422 94.16 wind 5.0 270 < th dose dependent rect. 7 19
424 94.17 temperature 30.0 270 < th dose dependent rect. 2 4
428 94.18 radiation 20.0 270 < th dose independent rect. 2 13
430 94.18 humidity 90.0 90 < th dose dependent rect. 9 2
456 94.25 wind 9.0 270 < th dose dependent rect. 5 1
465 94.28 atmosphere 1015.0 30 < th dose independent rect. 9 20
479 94.32 humidity 50.0 30 > th dose independent rect. 9 20
493 94.35 wind 9.0 30 < th dose dependent rect. 9 17
504 94.37 radiation 30.0 90 < th dose dependent rect. 4 23
550 94.45 radiation 40.0 270 < th dose independent rect. 11 19
556 94.47 precipitation 0.1 30 < th dose independent rect. 2 7
557 94.47 precipitation 0.1 30 < th dose dependent rect. 2 7
560 94.48 precipitation 0.1 270 < th dose independent rect. 6 22
563 94.48 precipitation 0.1 270 < th dose dependent rect. 6 22
575 94.50 temperature 10.0 1440 > th dose independent rect. 3 7
578 94.50 atmosphere 995.0 1440 > th dose independent rect. 3 7
580 94.50 temperature 10.0 1440 > th dose independent rect. 10 17
586 94.50 radiation 20.0 90 < th dose independent rect. 4 23
593 94.51 atmosphere 995.0 30 > th dose dependent rect. 2 7
595 94.52 wind 1.0 30 > th dose independent rect. 5 4
596 94.52 radiation 20.0 10 < th dose independent rect. 5 18
598 94.53 wind 9.0 30 < th dose independent rect. 2 7
599 94.53 temperature 10.0 30 > th dose independent rect. 2 7
601 94.53 temperature 30.0 30 < th dose independent rect. 2 7
602 94.53 humidity 50.0 30 > th dose independent rect. 2 7
604 94.53 atmosphere 995.0 30 > th dose independent rect. 2 7
605 94.53 atmosphere 1015.0 30 < th dose independent rect. 2 7
606 94.53 temperature 10.0 30 > th dose independent rect. 9 17
614 94.54 radiation 1.0 270 < th dose independent rect. 2 7
621 94.55 humidity 50.0 90 > th dose dependent sin 4 NA
623 94.55 radiation 1.0 270 > th dose dependent rect. 6 5
633 94.58 wind 9.0 270 < th dose independent rect. 6 20
651 94.60 precipitation 0.1 30 < th dose independent rect. 9 17
653 94.60 precipitation 0.1 30 < th dose dependent rect. 9 17
664 94.64 radiation 10.0 270 < th dose independent rect. 2 4
695 94.70 radiation 20.0 90 < th dose independent rect. 5 16
710 94.72 radiation 20.0 10 < th dose independent rect. 5 7
716 94.72 radiation 40.0 90 < th dose dependent rect. 13 20
736 94.76 wind 1.0 270 > th dose independent rect. 2 4
747 94.77 radiation 20.0 90 < th dose independent rect. 4 18
775 94.82 radiation 30.0 90 < th dose dependent rect. 1 23
780 94.83 wind 5.0 30 < th dose dependent rect. 9 17
786 94.84 humidity 50.0 270 > th dose dependent rect. 2 4
794 94.85 wind 9.0 270 < th dose independent rect. 2 4
795 94.85 temperature 10.0 270 > th dose independent rect. 2 4
798 94.85 humidity 50.0 270 > th dose independent rect. 2 4
801 94.85 atmosphere 995.0 270 > th dose independent rect. 2 4
802 94.85 atmosphere 1015.0 270 < th dose independent rect. 2 4
806 94.85 temperature 10.0 270 > th dose independent rect. 6 20
815 94.86 radiation 1.0 270 > th dose dependent sin 8 NA
820 94.87 wind 1.0 90 > th dose independent rect. 9 19
850 94.93 precipitation 0.1 270 < th dose independent rect. 2 4
851 94.93 precipitation 0.1 270 < th dose independent rect. 6 20
852 94.93 precipitation 0.1 270 < th dose dependent rect. 2 4
854 94.93 precipitation 0.1 270 < th dose dependent rect. 6 20
862 94.95 atmosphere 995.0 30 > th dose dependent rect. 5 4
868 94.96 radiation 20.0 90 < th dose independent rect. 4 7
870 94.96 wind 9.0 10 < th dose dependent rect. 9 4
875 94.97 wind 9.0 270 < th dose dependent rect. 16 10
885 94.99 wind 5.0 30 < th dose dependent rect. 9 4
922 95.06 humidity 90.0 90 < th dose dependent sin 4 NA
934 95.08 radiation 20.0 90 < th dose independent sin 5 NA
938 95.09 radiation 20.0 90 < th dose independent rect. 1 23
945 95.11 radiation 40.0 90 > th dose independent rect. 9 2
946 95.11 radiation 1.0 10 > th dose independent rect. 9 8
954 95.11 humidity 90.0 30 < th dose dependent rect. 9 5
974 95.15 atmosphere 1015.0 270 < th dose dependent rect. 4 2
975 95.15 humidity 50.0 30 > th dose dependent rect. 2 7
985 95.16 temperature 10.0 270 > th dose dependent rect. 5 1