BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0788700 Os03g0788700|AK073842
(479 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06390.1 | chr5:1952939-1955047 FORWARD LENGTH=459 528 e-150
AT2G35860.1 | chr2:15059859-15061810 FORWARD LENGTH=446 521 e-148
AT3G11700.1 | chr3:3698992-3700971 FORWARD LENGTH=463 514 e-146
AT3G52370.1 | chr3:19417549-19419549 FORWARD LENGTH=437 498 e-141
AT5G05650.1 | chr5:1686532-1686909 REVERSE LENGTH=126 107 1e-23
>AT5G06390.1 | chr5:1952939-1955047 FORWARD LENGTH=459
Length = 458
Score = 528 bits (1359), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/430 (62%), Positives = 316/430 (73%), Gaps = 26/430 (6%)
Query: 63 IVSNSVLVALLDSRYTEMAELVEKALLLQALEDAVAEHNVTILAPRNEALERDIDPEFKR 122
I SNSVLVALLDSRYTE+AELVEKALLLQ LEDAV HN+TI APRNEALERD+DPEFKR
Sbjct: 42 INSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPEFKR 101
Query: 123 FLLEPRNLNSLQSLLLFHVLPARLPSGSWPAAAT----HPTLAGEDVELAAADGGGGMRV 178
FLLEP NL SLQ+LL+FH++P R+ S WP+ + H TL + V L+ +G G V
Sbjct: 102 FLLEPGNLKSLQTLLMFHIIPNRVGSNQWPSEESGRVKHHTLGNDQVRLS--NGQGKKMV 159
Query: 179 AHAAVSRPDAVVRTDGVIHGIDRLLVPRSVQDEFNRRRSLADISAMPPTAAPEVDPRTDR 238
A + RPD + R DG+IHGI+RLL+PRSVQ++FNRRRSL ISA+ P APEVDPRT+R
Sbjct: 160 DLAEIIRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRSLQSISAVLPEGAPEVDPRTNR 219
Query: 239 LKKPAPP---GDSPVLPISDA-----TVPDPSVALASEPSDHYDGDSQVKDFIQTLLKYG 290
LKKPA P G P LPI A ++ H+DG++QVKDFI TLL YG
Sbjct: 220 LKKPAAPVPAGSPPALPIQSAMAPGPSLAPAPAPGPGGKQHHFDGEAQVKDFIHTLLHYG 279
Query: 291 GYNELADIFVNLTSLATELAQLVSEGYALTVLAPNDEAMARLTADQLSEPGSPENILYYH 350
GYNE+ADI VNLTSLATE+ +LVSEGY LTVLAPNDEAMA+LT DQLSEPG+PE I+YYH
Sbjct: 280 GYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIVYYH 339
Query: 351 MIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIFAD 410
+IPEYQTEESMYN+VRRFGKV++DTLR PHKV A+EADGSVKFG GE SAYLFDPDI+ D
Sbjct: 340 IIPEYQTEESMYNSVRRFGKVKFDTLRFPHKVAAKEADGSVKFGDGEKSAYLFDPDIYTD 399
Query: 411 GRISVQGIDAVLFXXXXXXXXXXXXXXXXXXXXXXXGVSKI-KHRRGKLLEAACQMVGIL 469
GRISVQGID VLF V KI + RRGKLLE AC M+G
Sbjct: 400 GRISVQGIDGVLFPQEEEVVESVKKP-----------VKKIVQPRRGKLLEVACSMLGAF 448
Query: 470 GQRSQFTRCQ 479
G+ + ++C+
Sbjct: 449 GKDTYLSKCR 458
>AT2G35860.1 | chr2:15059859-15061810 FORWARD LENGTH=446
Length = 445
Score = 521 bits (1342), Expect = e-148, Method: Compositional matrix adjust.
Identities = 270/427 (63%), Positives = 319/427 (74%), Gaps = 25/427 (5%)
Query: 63 IVSNSVLVALLDSRYTEMAELVEKALLLQALEDAVAEHNVTILAPRNEALERDIDPEFKR 122
I SNSVLVALLDS YTE+AELVEKALLLQ LE+AV +HN+TI APRN+ALER++DP FK
Sbjct: 34 INSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFKS 93
Query: 123 FLLEPRNLNSLQSLLLFHVLPARLPSGSWPAAATHP-TLAGEDVELAAADGGGGMRVAHA 181
FLLEPRNL SLQSLL+FH+LP R+ S WP+ + H TL+ + + L ++V A
Sbjct: 94 FLLEPRNLKSLQSLLMFHILPKRITSPQWPSLSHHHRTLSNDHLHLTV--DVNTLKVDSA 151
Query: 182 AVSRPDAVVRTDGVIHGIDRLLVPRSVQDEFNRRRSLADISAMPPTAAPEVDPRTDRLKK 241
+ RPD V+R DG+IHGI+RLL+PRSVQ++FNRRRSL ISA+ P APEVDPRT RLKK
Sbjct: 152 EIIRPDDVIRPDGIIHGIERLLIPRSVQEDFNRRRSLRSISAVIPEGAPEVDPRTHRLKK 211
Query: 242 PAPP---GDSPVLPISDA-----TVPDPSVALASEPSDHYDGDSQVKDFIQTLLKYGGYN 293
P+P G PVLPI DA ++ P H++GD+QVKDFI TLL YGGYN
Sbjct: 212 PSPAVPAGAPPVLPIYDAMSPGPSLAPAPAPGPGGPRGHFNGDAQVKDFIHTLLHYGGYN 271
Query: 294 ELADIFVNLTSLATELAQLVSEGYALTVLAPNDEAMARLTADQLSEPGSPENILYYHMIP 353
E+ADI VNLTSLATE+ +LVSEGY LTVLAPNDEAMA+LT DQLSEPG+PE I+YYH+IP
Sbjct: 272 EMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIP 331
Query: 354 EYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIFADGRI 413
EYQTEESMYNAVRRFGKV+YD+LR PHKV+A+EADGSVKFGHG+GSAYLFDPDI+ DGRI
Sbjct: 332 EYQTEESMYNAVRRFGKVKYDSLRFPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRI 391
Query: 414 SVQGIDAVLFXXXXXXXXXXXXXXXXXXXXXXXGVSKI-KHRRGKLLEAACQMVGILGQR 472
SVQGID VLF V K+ K RRGKL+E AC+M+G
Sbjct: 392 SVQGIDGVLFPKEETPATEIKPAAPV--------VKKVSKSRRGKLMEVACRMMG----- 438
Query: 473 SQFTRCQ 479
S+F CQ
Sbjct: 439 SRFIPCQ 445
>AT3G11700.1 | chr3:3698992-3700971 FORWARD LENGTH=463
Length = 462
Score = 514 bits (1324), Expect = e-146, Method: Compositional matrix adjust.
Identities = 270/432 (62%), Positives = 318/432 (73%), Gaps = 24/432 (5%)
Query: 63 IVSNSVLVALLDSRYTEMAELVEKALLLQALEDAVAEHNVTILAPRNEALERDIDPEFKR 122
I SNSVLVALLDSRYTE+AELVEKALLLQ LEDAV HN+TI APRNEALERD+DP+FKR
Sbjct: 39 INSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPDFKR 98
Query: 123 FLLEPRNLNSLQSLLLFHVLPARLPSGSWP----AAATHPTLAGEDV-ELAAADGGGGMR 177
FLL+P NL SLQ+LLL H++P R+ S WP H TL + V L+ G G R
Sbjct: 99 FLLQPGNLKSLQTLLLSHIIPKRVGSNQWPEENSGRVKHVTLGHDQVLHLSKLKGTNGKR 158
Query: 178 VAHAAV-SRPDAVVRTDGVIHGIDRLLVPRSVQDEFNRRRSLADISAMPPTAAPEVDPRT 236
+ ++AV +RPD + R DG+IHGI+RLL+PRSVQ++FNRRR+L ISA+ P APE+DPRT
Sbjct: 159 LVNSAVITRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRNLRSISAVLPEGAPEIDPRT 218
Query: 237 DRLKKPA-----PPGDSPVLPISDATVPDPSVALASEPS-----DHYDGDSQVKDFIQTL 286
+RLKK A P G PVLPI A P PS+A A P H++GD+QVKDFI TL
Sbjct: 219 NRLKKSATAVSVPAGSPPVLPIESAMAPGPSLAPAPAPGPGGAHKHFNGDAQVKDFIHTL 278
Query: 287 LKYGGYNELADIFVNLTSLATELAQLVSEGYALTVLAPNDEAMARLTADQLSEPGSPENI 346
L YGGYNE+ADI VNLTSLATE+ +LVSEGY LTVLAPNDEAM +LT DQLSEPG+PE I
Sbjct: 279 LHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMGKLTTDQLSEPGAPEQI 338
Query: 347 LYYHMIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPD 406
+YYH+IPEYQTEESMYN+VRRFGKV+Y+TLR PHKV A+EADGSVKFG G+ SAYLFDPD
Sbjct: 339 MYYHIIPEYQTEESMYNSVRRFGKVKYETLRFPHKVGAKEADGSVKFGSGDRSAYLFDPD 398
Query: 407 IFADGRISVQGIDAVLFXXXXXXXXXXXXXXXXXXXXXXXGVSKIKHRRGKLLEAACQMV 466
I+ DGRISVQGID VLF ++ RRGKLLE AC M+
Sbjct: 399 IYTDGRISVQGIDGVLFPEEKEEETVKKPTGPVKKV--------VQPRRGKLLEVACSML 450
Query: 467 GILGQRSQFTRC 478
G +G+ S +RC
Sbjct: 451 GAIGKDSYLSRC 462
>AT3G52370.1 | chr3:19417549-19419549 FORWARD LENGTH=437
Length = 436
Score = 498 bits (1282), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/430 (60%), Positives = 313/430 (72%), Gaps = 36/430 (8%)
Query: 63 IVSNSVLVALLDSRYTEMAELVEKALLLQALEDAVAEHNVTILAPRNEALERDIDPEFKR 122
I SNSVLVALLDS YTE+AELVEKALLLQ LE+AV +HN+TI APRN+ALE+++DPEFK
Sbjct: 30 INSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGQHNITIFAPRNDALEKNLDPEFKS 89
Query: 123 FLLEPRNLNSLQSLLLFHVLPARLPSGSWPAAA-THPTLAGEDVELAAADGGGGMRVAHA 181
FLL+P+NL SLQSLL+FH+LP R+ S + +A +H TL+ + + +V A
Sbjct: 90 FLLQPKNLKSLQSLLMFHILPKRITSPQFSSAVVSHRTLSNDHLHFTNG------KVNSA 143
Query: 182 AVSRPDAVVRTDGVIHGIDRLLVPRSVQDEFNRRRSLADISAMPPTAAPEVDPRTDRLKK 241
+++PD + R DG+IHGI+RLL+PRSVQ++FNRRRSL I+A+ P APEVDPRT RLKK
Sbjct: 144 EITKPDDLTRPDGIIHGIERLLIPRSVQEDFNRRRSLRSIAAVLPEGAPEVDPRTHRLKK 203
Query: 242 PAPPGDSP---VLPISDA-----TVPDPSVALASEPSDHYDGDSQVKDFIQTLLKYGGYN 293
P + VLP+ DA ++ P H++G++QVKDFI TLL YGGYN
Sbjct: 204 KPAPIPAGAPPVLPVYDAMSPGPSLAPAPAPGPGGPRHHFNGEAQVKDFIHTLLHYGGYN 263
Query: 294 ELADIFVNLTSLATELAQLVSEGYALTVLAPNDEAMARLTADQLSEPGSPENILYYHMIP 353
E+ADI VNLTSLATE+ +LVSEGY LTVLAPNDEAMA+LT DQLSEPG+PE I+YYH+IP
Sbjct: 264 EMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIP 323
Query: 354 EYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIFADGRI 413
EYQTEESMYN+VRRFGK+RYD+LR PHKV A+EADGSVKFGHG+GSAYLFDPDI+ DGRI
Sbjct: 324 EYQTEESMYNSVRRFGKIRYDSLRFPHKVEAQEADGSVKFGHGDGSAYLFDPDIYTDGRI 383
Query: 414 SVQGIDAVLFXXXXXXXXXXXXXXXXXXXXXXXGVSKIKH----RRGKLLEAACQMVGIL 469
SVQGID VLF GV +K RRGKL+E AC M+G
Sbjct: 384 SVQGIDGVLF------------PEEKTPVEKKTGVPVVKKAPKPRRGKLMEVACTMLG-- 429
Query: 470 GQRSQFTRCQ 479
SQF CQ
Sbjct: 430 ---SQFPTCQ 436
>AT5G05650.1 | chr5:1686532-1686909 REVERSE LENGTH=126
Length = 125
Score = 107 bits (268), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 4/89 (4%)
Query: 335 DQLSEPGSPENILYYHMIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFG 394
DQLSE + I YYH+IPEYQTE+S Y VRR G +++DT PH + ARE S+KFG
Sbjct: 2 DQLSE----KQIWYYHIIPEYQTEKSFYACVRRSGMIKFDTFYFPHMLSARETQRSIKFG 57
Query: 395 HGEGSAYLFDPDIFADGRISVQGIDAVLF 423
G S L+DPDI+ DG+IS+QG+ VLF
Sbjct: 58 DGVWSGCLYDPDIYTDGKISIQGVGGVLF 86
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,102,892
Number of extensions: 364121
Number of successful extensions: 1359
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1343
Number of HSP's successfully gapped: 5
Length of query: 479
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 377
Effective length of database: 8,310,137
Effective search space: 3132921649
Effective search space used: 3132921649
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)