BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0788600 Os03g0788600|AK069046
         (474 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0788600  Beta-Ig-H3/fasciclin domain containing protein      726   0.0  
Os07g0160600  Beta-Ig-H3/fasciclin domain containing protein      605   e-173
Os03g0788700  Beta-Ig-H3/fasciclin domain containing protein      568   e-162

>Os03g0788600 Beta-Ig-H3/fasciclin domain containing protein
          Length = 474

 Score =  726 bits (1873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/423 (86%), Positives = 365/423 (86%)

Query: 52  INSNSVLVALLDSHYTXXXXXXXXXXXXQTLEDAVGKHNVTIFAPRNEALERDLDPEFKR 111
           INSNSVLVALLDSHYT            QTLEDAVGKHNVTIFAPRNEALERDLDPEFKR
Sbjct: 52  INSNSVLVALLDSHYTELAELVEKALLLQTLEDAVGKHNVTIFAPRNEALERDLDPEFKR 111

Query: 112 FLLEPRNLKSLQSLLLFHVLPARLPSGSWSAVSHPTLSGEEVELAAAANDGAMRVAHAAV 171
           FLLEPRNLKSLQSLLLFHVLPARLPSGSWSAVSHPTLSGEEVELAAAANDGAMRVAHAAV
Sbjct: 112 FLLEPRNLKSLQSLLLFHVLPARLPSGSWSAVSHPTLSGEEVELAAAANDGAMRVAHAAV 171

Query: 172 TRPDAVLRPDGVIHGIERLLVPRSVQEDFNRRRSLADISAVLPTGAPEVDPRTHRXXXXX 231
           TRPDAVLRPDGVIHGIERLLVPRSVQEDFNRRRSLADISAVLPTGAPEVDPRTHR     
Sbjct: 172 TRPDAVLRPDGVIHGIERLLVPRSVQEDFNRRRSLADISAVLPTGAPEVDPRTHRLKKPA 231

Query: 232 XXXXXXXXXXXXIWDAMXXXXXXXXXXXXXXXXXKHHFDGHSQVKDFIQTLLLYGGYNEL 291
                       IWDAM                 KHHFDGHSQVKDFIQTLLLYGGYNEL
Sbjct: 232 PPVPPGAPPVLPIWDAMAPGPSIAPAPAPGPGSGKHHFDGHSQVKDFIQTLLLYGGYNEL 291

Query: 292 ADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHMIPEY 351
           ADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHMIPEY
Sbjct: 292 ADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHMIPEY 351

Query: 352 QTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIYTDGRIAV 411
           QTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIYTDGRIAV
Sbjct: 352 QTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIYTDGRIAV 411

Query: 412 QGIDAVLFPPDDTKTAPDTAPVRRAPAVTGTXXXXXXXXXXXXEATCQMAGILGQRLRFA 471
           QGIDAVLFPPDDTKTAPDTAPVRRAPAVTGT            EATCQMAGILGQRLRFA
Sbjct: 412 QGIDAVLFPPDDTKTAPDTAPVRRAPAVTGTRKKNKLRRGKLLEATCQMAGILGQRLRFA 471

Query: 472 SCQ 474
           SCQ
Sbjct: 472 SCQ 474



>Os07g0160600 Beta-Ig-H3/fasciclin domain containing protein
          Length = 479

 Score =  605 bits (1559), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 319/435 (73%), Positives = 334/435 (76%), Gaps = 17/435 (3%)

Query: 52  INSNSVLVALLDSHYTXXXXXXXXXXXXQTLEDAVGKHNVTIFAPRNEALERDLDPEFKR 111
           +NSNSVLVALLDSHYT            QTLEDAVGK NVTIFAPRNEALERDLDPEF+R
Sbjct: 50  VNSNSVLVALLDSHYTELAELVEKALLLQTLEDAVGKGNVTIFAPRNEALERDLDPEFRR 109

Query: 112 FLLEPRNLKSLQSLLLFHVLPARLPSGSWSAVS----HPTLSGEEVELAAAANDGAMRVA 167
           FLLEPRNL+SLQ LLLFHVLPARL +   S+      HPTLSGE V+L+A+     MRV 
Sbjct: 110 FLLEPRNLRSLQRLLLFHVLPARLHASDSSSPDFPSSHPTLSGERVDLSASP----MRVG 165

Query: 168 HAAVTRPDAVLRPDGVIHGIERLLVPRSVQEDFNRRRSLADISAVLPTGAPEVDPRTHRX 227
            AAVTRPDAV+RPDGVIHGIERLLVPRSVQEDFNRRRSLA ISAVLPTGAPEVDPRTHR 
Sbjct: 166 AAAVTRPDAVVRPDGVIHGIERLLVPRSVQEDFNRRRSLAAISAVLPTGAPEVDPRTHRL 225

Query: 228 XXXXXXXXXXXXXXXXIWDAMXXXXXXXXXXXXXXXXXKHHFDGHSQVKDFIQTLLLYGG 287
                           IWDAM                 KHHFDGHSQVKDFIQTLLLYGG
Sbjct: 226 KKPAPPVPPGAPPVLPIWDAMAPGPSIAPAPAPGPGSGKHHFDGHSQVKDFIQTLLLYGG 285

Query: 288 YNELADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHM 347
           YNELADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHM
Sbjct: 286 YNELADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHM 345

Query: 348 IPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIYTDG 407
           IPEYQTEESMYNAVRRFGKVRYDTLRLP+KV AREADGSVKFGHGEGSAYLFDPDIYTDG
Sbjct: 346 IPEYQTEESMYNAVRRFGKVRYDTLRLPNKVTAREADGSVKFGHGEGSAYLFDPDIYTDG 405

Query: 408 RIAVQGIDAVLFPPDDTKT--------APDTAPVRRAPAVTGTXXXXXXXXXXXXEATCQ 459
           RI+VQGIDAVLFPP DT T        +   AP R+APAVT              E  CQ
Sbjct: 406 RISVQGIDAVLFPPKDTATGGEGSGSGSSGAAPARKAPAVTA-HSKSKLRRGKLLEGACQ 464

Query: 460 MAGILGQRLRFASCQ 474
           + G LG+R RFASCQ
Sbjct: 465 VMGFLGRRSRFASCQ 479



>Os03g0788700 Beta-Ig-H3/fasciclin domain containing protein
          Length = 479

 Score =  568 bits (1464), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 307/426 (72%), Positives = 328/426 (76%), Gaps = 12/426 (2%)

Query: 52  INSNSVLVALLDSHYTXXXXXXXXXXXXQTLEDAVGKHNVTIFAPRNEALERDLDPEFKR 111
           I SNSVLVALLDS YT            Q LEDAV +HNVTI APRNEALERD+DPEFKR
Sbjct: 63  IVSNSVLVALLDSRYTEMAELVEKALLLQALEDAVAEHNVTILAPRNEALERDIDPEFKR 122

Query: 112 FLLEPRNLKSLQSLLLFHVLPARLPSGSW-SAVSHPTLSGEEVELAAAANDGAMRVAHAA 170
           FLLEPRNL SLQSLLLFHVLPARLPSGSW +A +HPTL+GE+VELAAA   G MRVAHAA
Sbjct: 123 FLLEPRNLNSLQSLLLFHVLPARLPSGSWPAAATHPTLAGEDVELAAADGGGGMRVAHAA 182

Query: 171 VTRPDAVLRPDGVIHGIERLLVPRSVQEDFNRRRSLADISAVLPTGAPEVDPRTHRXXXX 230
           V+RPDAV+R DGVIHGI+RLLVPRSVQ++FNRRRSLADISA+ PT APEVDPRT R    
Sbjct: 183 VSRPDAVVRTDGVIHGIDRLLVPRSVQDEFNRRRSLADISAMPPTAAPEVDPRTDRLKKP 242

Query: 231 XXXXXXXXXXXXXIWDAMXXXXXXXXXXXXXXXXXKHHFDGHSQVKDFIQTLLLYGGYNE 290
                        I DA                    H+DG SQVKDFIQTLL YGGYNE
Sbjct: 243 APPGDSPVLP---ISDA-----TVPDPSVALASEPSDHYDGDSQVKDFIQTLLKYGGYNE 294

Query: 291 LADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHMIPE 350
           LADI VNLTSLATE+ +LVSEGY LTVLAPNDEAMARLT DQLSEPGSPENILYYHMIPE
Sbjct: 295 LADIFVNLTSLATELAQLVSEGYALTVLAPNDEAMARLTADQLSEPGSPENILYYHMIPE 354

Query: 351 YQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIYTDGRIA 410
           YQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDI+ DGRI+
Sbjct: 355 YQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIFADGRIS 414

Query: 411 VQGIDAVLFPPDD--TKTAPDTAPVRRAPAVTGTXXXXXXXXXXXXEATCQMAGILGQRL 468
           VQGIDAVLFPP +  TKT P TA +R APA+TG             EA CQM GILGQR 
Sbjct: 415 VQGIDAVLFPPAETKTKTKPATARIRTAPAITGV-SKIKHRRGKLLEAACQMVGILGQRS 473

Query: 469 RFASCQ 474
           +F  CQ
Sbjct: 474 QFTRCQ 479



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.135    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,216,342
Number of extensions: 525900
Number of successful extensions: 1212
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1203
Number of HSP's successfully gapped: 4
Length of query: 474
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 369
Effective length of database: 11,553,331
Effective search space: 4263179139
Effective search space used: 4263179139
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)