BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0737400 Os03g0737400|AK063722
(173 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0737400 Magnesium-dependent phosphatase-1 family protein 360 e-100
Os03g0737300 Magnesium-dependent phosphatase-1 family protein 274 2e-74
Os11g0434000 HAD-superfamily phosphatase subfamily IIIC dom... 191 2e-49
>Os03g0737400 Magnesium-dependent phosphatase-1 family protein
Length = 173
Score = 360 bits (925), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/173 (100%), Positives = 173/173 (100%)
Query: 1 MGDERVKAEALQILGLFQALPRLVVFDLDYTLWPFYCECRSKRESPSLYRHAKGIMFALR 60
MGDERVKAEALQILGLFQALPRLVVFDLDYTLWPFYCECRSKRESPSLYRHAKGIMFALR
Sbjct: 1 MGDERVKAEALQILGLFQALPRLVVFDLDYTLWPFYCECRSKRESPSLYRHAKGIMFALR 60
Query: 61 EKGIDMAIASRSPTPDIAKVFIDKLEIKSMFVAQEIFSSWTHKTEHFQKIQRKTGIPYKS 120
EKGIDMAIASRSPTPDIAKVFIDKLEIKSMFVAQEIFSSWTHKTEHFQKIQRKTGIPYKS
Sbjct: 61 EKGIDMAIASRSPTPDIAKVFIDKLEIKSMFVAQEIFSSWTHKTEHFQKIQRKTGIPYKS 120
Query: 121 MLFFDDEDRNIESISKMGVTSVLVENGVNLDMFKLGLSNFATNVAASSTSKDE 173
MLFFDDEDRNIESISKMGVTSVLVENGVNLDMFKLGLSNFATNVAASSTSKDE
Sbjct: 121 MLFFDDEDRNIESISKMGVTSVLVENGVNLDMFKLGLSNFATNVAASSTSKDE 173
>Os03g0737300 Magnesium-dependent phosphatase-1 family protein
Length = 181
Score = 274 bits (701), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 130/175 (74%), Positives = 150/175 (85%), Gaps = 2/175 (1%)
Query: 1 MGDERVKAEALQILGLFQALPRLVVFDLDYTLWPFYCECRSKRESPSLYRHAKGIMFALR 60
MGDERVKAEALQILG F+ALPRLVVFDLD+T+WP YC+C S +SP L+RHAKGIM AL+
Sbjct: 1 MGDERVKAEALQILGRFEALPRLVVFDLDHTIWPLYCDCCSIGDSPRLFRHAKGIMCALK 60
Query: 61 EKGIDMAIASRSPTPDIAKVFIDKLEIKSMFVAQEIFSSWTHKTEHFQKIQRKTGIPYKS 120
EKGI MA+ASRS TPDIA F+DKLE++ MFV +EIF SWTHKTEHFQ+IQR TGIPY+S
Sbjct: 61 EKGIAMAVASRSSTPDIANDFLDKLELQPMFVTKEIFDSWTHKTEHFQRIQRTTGIPYES 120
Query: 121 MLFFDDEDRNIESISKMGVTSVLV--ENGVNLDMFKLGLSNFATNVAASSTSKDE 173
MLFFDDE RN ++SKMGVTS+LV + GVNL+MFKLGL+NFA AASST KDE
Sbjct: 121 MLFFDDEHRNFATVSKMGVTSILVDWDGGVNLEMFKLGLNNFAAKFAASSTDKDE 175
>Os11g0434000 HAD-superfamily phosphatase subfamily IIIC domain containing
protein
Length = 221
Score = 191 bits (486), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 120/167 (71%), Gaps = 1/167 (0%)
Query: 4 ERVKAEALQILGLFQALPRLVVFDLDYTLWPFYCECRSKRESPSLYRHAKGIMFALREKG 63
E VKAEAL ++ LPRLVVFDLD+TLWPF C+ K E P LY A+GI+ AL+++G
Sbjct: 36 EEVKAEALALMAAHPVLPRLVVFDLDHTLWPFQCDRLPKDEPPYLYPQARGILKALKDRG 95
Query: 64 IDMAIASR-SPTPDIAKVFIDKLEIKSMFVAQEIFSSWTHKTEHFQKIQRKTGIPYKSML 122
I+MAIASR S +AK F++KL I MF AQEIF +W+ K EHFQ I RKTG+P+KSML
Sbjct: 96 IEMAIASRASRKKGVAKAFLEKLGIHFMFGAQEIFYTWSPKNEHFQSIHRKTGVPFKSML 155
Query: 123 FFDDEDRNIESISKMGVTSVLVENGVNLDMFKLGLSNFATNVAASST 169
FFDDE RNI + K+GV+ VLV+ G+ L+ + GLSN+A A+ +
Sbjct: 156 FFDDEARNIIATRKLGVSCVLVDTGITLEKLRTGLSNYANRSASPNA 202
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,100,712
Number of extensions: 181059
Number of successful extensions: 370
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 368
Number of HSP's successfully gapped: 3
Length of query: 173
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 79
Effective length of database: 12,127,685
Effective search space: 958087115
Effective search space used: 958087115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 152 (63.2 bits)