Os03g0737300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Magnesium-dependent phosphatase-1 family protein.
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Os03g0737300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Magnesium-dependent phosphatase-1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.61 | 0.595 | 7.35 | 1.44 | 0.268 | -1.67 | 0.822 | 3.34 | 0.385 | 2.89 | 23.2 | 793 | -- | -- |
| 167.63 | 0.603 | 7.45 | 0.949 | 0.00724 | -1.48 | -0.942 | -- | 0.179 | 10 | 22.92 | 730 | -- | -- |
| 162.68 | 0.594 | 7.36 | 1.43 | 0.327 | -1.6 | -- | 3.27 | 0.379 | 3.4 | 23.13 | 852 | -- | -- |
| 167.75 | 0.603 | 7.43 | 0.678 | 0.454 | -1.24 | -- | -- | 0.169 | 5.02 | 23.04 | 899 | -- | -- |
| 165.54 | 0.599 | 7.35 | 1.37 | -- | -1.68 | -- | 3.31 | 0.382 | -- | 23.03 | 700 | -- | -- |
| 204.67 | 0.671 | 7.46 | 0.369 | 0.652 | -- | -0.497 | -- | -0.0226 | 7.33 | -- | -- | -- | -- |
| 205.24 | 0.671 | 7.46 | 0.356 | 0.655 | -- | -- | -- | -0.0226 | 7.09 | -- | -- | -- | -- |
| 170.95 | 0.609 | 7.43 | 0.702 | -- | -1.43 | -- | -- | 0.199 | -- | 22.84 | 664 | -- | -- |
| 179.69 | 0.624 | 7.43 | -- | 0.504 | -1.08 | -- | -- | 0.101 | 5.44 | 23.66 | 907 | -- | -- |
| 227.84 | 0.705 | 7.48 | 0.369 | -- | -- | -- | -- | -0.0108 | -- | -- | -- | -- | -- |
| 208.58 | 0.676 | 7.47 | -- | 0.659 | -- | -- | -- | -0.0622 | 7.06 | -- | -- | -- | -- |
| 183.14 | 0.63 | 7.45 | -- | -- | -1.28 | -- | -- | 0.0925 | -- | 23.11 | 646 | -- | -- |
| 231.43 | 0.71 | 7.49 | -- | -- | -- | -- | -- | -0.0517 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.59 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 2 | 157.81 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 6 | 158.64 | temperature | 25 | 720 | > th | dose dependent | rect. | 14 | 15 |
| 38 | 159.69 | temperature | 25 | 720 | > th | dose dependent | sin | 16 | NA |
| 55 | 160.73 | radiation | 1 | 720 | > th | dose independent | sin | 17 | NA |
| 81 | 161.65 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 7 |
| 93 | 162.02 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 9 |
| 97 | 162.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 7 |
| 104 | 162.29 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 15 |
| 123 | 162.72 | radiation | 1 | 720 | < th | dose dependent | sin | 19 | NA |
| 129 | 162.80 | radiation | 1 | 720 | > th | dose independent | rect. | 8 | 11 |
| 155 | 163.07 | radiation | 1 | 720 | < th | dose independent | sin | 19 | NA |
| 165 | 163.21 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 185 | 163.50 | humidity | 90 | 720 | < th | dose dependent | rect. | 15 | 4 |
| 188 | 163.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 197 | 163.66 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 6 |
| 201 | 163.70 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 4 |
| 204 | 163.74 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 14 |
| 215 | 163.89 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 8 |
| 237 | 164.17 | temperature | 10 | 720 | > th | dose dependent | sin | 20 | NA |
| 282 | 164.52 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 10 |
| 311 | 164.84 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 7 |
| 326 | 164.91 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 15 |
| 328 | 164.93 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 9 |
| 354 | 165.02 | radiation | 1 | 720 | < th | dose dependent | rect. | 13 | 5 |
| 364 | 165.08 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 365 | 165.09 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 17 |
| 378 | 165.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 402 | 165.31 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 409 | 165.35 | temperature | 25 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 414 | 165.37 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 1 |
| 471 | 165.69 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 472 | 165.72 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 4 |
| 641 | 166.45 | radiation | 1 | 720 | > th | dose independent | rect. | 17 | 2 |
| 670 | 166.48 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 802 | 166.92 | temperature | 30 | 720 | < th | dose independent | sin | 15 | NA |
| 803 | 166.92 | radiation | 1 | 720 | > th | dose independent | rect. | 13 | 6 |
| 838 | 167.02 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 1 |
| 839 | 167.02 | humidity | 50 | 720 | > th | dose dependent | sin | 18 | NA |
| 854 | 167.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 14 |
| 860 | 167.08 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 861 | 167.08 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 13 |
| 974 | 167.53 | temperature | 20 | 30 | > th | dose dependent | rect. | 8 | 23 |