BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0737300 Os03g0737300|AK071016
(181 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0737300 Magnesium-dependent phosphatase-1 family protein 379 e-106
Os03g0737400 Magnesium-dependent phosphatase-1 family protein 274 2e-74
Os11g0434000 HAD-superfamily phosphatase subfamily IIIC dom... 172 2e-43
>Os03g0737300 Magnesium-dependent phosphatase-1 family protein
Length = 181
Score = 379 bits (974), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MGDERVKAEALQILGRFEALPRLVVFDLDHTIWPLYCDCCSIGDSPRLFRHAKGIMCALK 60
MGDERVKAEALQILGRFEALPRLVVFDLDHTIWPLYCDCCSIGDSPRLFRHAKGIMCALK
Sbjct: 1 MGDERVKAEALQILGRFEALPRLVVFDLDHTIWPLYCDCCSIGDSPRLFRHAKGIMCALK 60
Query: 61 EKGIAMAVASRSSTPDIANDFLDKLELQPMFVTKEIFDSWTHKTEHFQRIQRTTGIPYES 120
EKGIAMAVASRSSTPDIANDFLDKLELQPMFVTKEIFDSWTHKTEHFQRIQRTTGIPYES
Sbjct: 61 EKGIAMAVASRSSTPDIANDFLDKLELQPMFVTKEIFDSWTHKTEHFQRIQRTTGIPYES 120
Query: 121 MLFFDDEHRNFATVSKMGVTSILVDWDGGVNLEMFKLGLNNFAAKFAASSTDKDEQTSFN 180
MLFFDDEHRNFATVSKMGVTSILVDWDGGVNLEMFKLGLNNFAAKFAASSTDKDEQTSFN
Sbjct: 121 MLFFDDEHRNFATVSKMGVTSILVDWDGGVNLEMFKLGLNNFAAKFAASSTDKDEQTSFN 180
Query: 181 G 181
G
Sbjct: 181 G 181
>Os03g0737400 Magnesium-dependent phosphatase-1 family protein
Length = 173
Score = 274 bits (701), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 130/175 (74%), Positives = 150/175 (85%), Gaps = 2/175 (1%)
Query: 1 MGDERVKAEALQILGRFEALPRLVVFDLDHTIWPLYCDCCSIGDSPRLFRHAKGIMCALK 60
MGDERVKAEALQILG F+ALPRLVVFDLD+T+WP YC+C S +SP L+RHAKGIM AL+
Sbjct: 1 MGDERVKAEALQILGLFQALPRLVVFDLDYTLWPFYCECRSKRESPSLYRHAKGIMFALR 60
Query: 61 EKGIAMAVASRSSTPDIANDFLDKLELQPMFVTKEIFDSWTHKTEHFQRIQRTTGIPYES 120
EKGI MA+ASRS TPDIA F+DKLE++ MFV +EIF SWTHKTEHFQ+IQR TGIPY+S
Sbjct: 61 EKGIDMAIASRSPTPDIAKVFIDKLEIKSMFVAQEIFSSWTHKTEHFQKIQRKTGIPYKS 120
Query: 121 MLFFDDEHRNFATVSKMGVTSILVDWDGGVNLEMFKLGLNNFAAKFAASSTDKDE 175
MLFFDDE RN ++SKMGVTS+LV + GVNL+MFKLGL+NFA AASST KDE
Sbjct: 121 MLFFDDEDRNIESISKMGVTSVLV--ENGVNLDMFKLGLSNFATNVAASSTSKDE 173
>Os11g0434000 HAD-superfamily phosphatase subfamily IIIC domain containing
protein
Length = 221
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 115/170 (67%), Gaps = 3/170 (1%)
Query: 4 ERVKAEALQILGRFEALPRLVVFDLDHTIWPLYCDCCSIGDSPRLFRHAKGIMCALKEKG 63
E VKAEAL ++ LPRLVVFDLDHT+WP CD + P L+ A+GI+ ALK++G
Sbjct: 36 EEVKAEALALMAAHPVLPRLVVFDLDHTLWPFQCDRLPKDEPPYLYPQARGILKALKDRG 95
Query: 64 IAMAVASRSS-TPDIANDFLDKLELQPMFVTKEIFDSWTHKTEHFQRIQRTTGIPYESML 122
I MA+ASR+S +A FL+KL + MF +EIF +W+ K EHFQ I R TG+P++SML
Sbjct: 96 IEMAIASRASRKKGVAKAFLEKLGIHFMFGAQEIFYTWSPKNEHFQSIHRKTGVPFKSML 155
Query: 123 FFDDEHRNFATVSKMGVTSILVDWDGGVNLEMFKLGLNNFAAKFAASSTD 172
FFDDE RN K+GV+ +LV D G+ LE + GL+N+A + A+ + +
Sbjct: 156 FFDDEARNIIATRKLGVSCVLV--DTGITLEKLRTGLSNYANRSASPNAE 203
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.137 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,648,467
Number of extensions: 205340
Number of successful extensions: 432
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 429
Number of HSP's successfully gapped: 3
Length of query: 181
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 86
Effective length of database: 12,075,471
Effective search space: 1038490506
Effective search space used: 1038490506
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 153 (63.5 bits)