Os03g0737400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Magnesium-dependent phosphatase-1 family protein.
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Os03g0737400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Magnesium-dependent phosphatase-1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.72 | 0.501 | 10.5 | -0.214 | 0.383 | 1.29 | 0.699 | 3.51 | -0.339 | 0.96 | 0.1563 | 4768 | -- | -- |
| 121.48 | 0.513 | 10.5 | -0.338 | 0.374 | 1.3 | 0.689 | -- | -0.363 | 0.832 | 1 | 4798 | -- | -- |
| 115.69 | 0.501 | 10.5 | -0.244 | 0.382 | 1.26 | -- | 3.48 | -0.339 | 0.603 | 0.203 | 4769 | -- | -- |
| 123.41 | 0.517 | 10.5 | -0.357 | 0.371 | 1.28 | -- | -- | -0.366 | 0.564 | 0.9978 | 4794 | -- | -- |
| 124.77 | 0.52 | 10.5 | -0.231 | -- | 1.29 | -- | 3.38 | -0.336 | -- | 0.2097 | 4678 | -- | -- |
| 150.06 | 0.574 | 10.5 | -0.636 | 0.37 | -- | 0.506 | -- | -0.225 | 0.723 | -- | -- | -- | -- |
| 151.13 | 0.576 | 10.5 | -0.654 | 0.369 | -- | -- | -- | -0.227 | 0.519 | -- | -- | -- | -- |
| 132 | 0.535 | 10.5 | -0.342 | -- | 1.28 | -- | -- | -0.354 | -- | 1 | 4678 | -- | -- |
| 126.74 | 0.524 | 10.5 | -- | 0.347 | 1.36 | -- | -- | -0.341 | 0.523 | 1.098 | 4681 | -- | -- |
| 159.66 | 0.59 | 10.5 | -0.642 | -- | -- | -- | -- | -0.22 | -- | -- | -- | -- | -- |
| 162.41 | 0.596 | 10.5 | -- | 0.359 | -- | -- | -- | -0.154 | 0.429 | -- | -- | -- | -- |
| 135.08 | 0.541 | 10.5 | -- | -- | 1.38 | -- | -- | -0.334 | -- | 1 | 4678 | -- | -- |
| 170.52 | 0.61 | 10.5 | -- | -- | -- | -- | -- | -0.149 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.10 | humidity | 60 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 6 | 105.37 | humidity | 90 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 7 | 105.41 | humidity | 60 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 15 | 105.59 | humidity | 60 | 14400 | > th | dose dependent | rect. | 11 | 8 |
| 18 | 105.61 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 41 | 105.80 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 43 | 105.82 | humidity | 80 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 61 | 105.93 | humidity | 90 | 14400 | < th | dose dependent | rect. | 14 | 6 |
| 105 | 106.16 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 137 | 106.29 | humidity | 80 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 168 | 106.41 | humidity | 60 | 14400 | > th | dose dependent | sin | 20 | NA |
| 204 | 106.55 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 219 | 106.60 | humidity | 70 | 14400 | > th | dose independent | rect. | 11 | 21 |
| 234 | 106.63 | humidity | 80 | 14400 | > th | dose independent | sin | 21 | NA |
| 273 | 106.79 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 280 | 106.81 | humidity | 70 | 14400 | > th | dose independent | sin | 18 | NA |
| 303 | 106.87 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 10 |
| 308 | 106.87 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 15 |
| 394 | 107.00 | humidity | 90 | 14400 | < th | dose dependent | sin | 19 | NA |
| 420 | 107.06 | humidity | 80 | 14400 | < th | dose independent | sin | 21 | NA |
| 485 | 107.19 | humidity | 70 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 487 | 107.20 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 525 | 107.26 | humidity | 70 | 14400 | > th | dose independent | rect. | 24 | 20 |
| 579 | 107.30 | humidity | 70 | 14400 | > th | dose independent | no | NA | NA |
| 620 | 107.34 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 671 | 107.47 | humidity | 70 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 690 | 107.50 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 769 | 107.65 | humidity | 70 | 14400 | < th | dose independent | sin | 17 | NA |
| 780 | 107.67 | humidity | 70 | 14400 | < th | dose independent | rect. | 11 | 22 |