Os11g0434000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HAD-superfamily phosphatase subfamily IIIC domain containing protein.
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Os11g0434000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HAD-superfamily phosphatase subfamily IIIC domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.47 | 0.434 | 11.2 | -1.66 | 0.716 | -1.39 | 1.26 | 3.82 | -0.527 | 1.97 | 18.54 | 17517 | -- | -- |
| 90.04 | 0.442 | 11.4 | -1.71 | 0.812 | -2.05 | 1.59 | -- | -0.607 | 1.39 | 14.95 | 29704 | -- | -- |
| 85.93 | 0.432 | 11.2 | -1.38 | 0.723 | -1.44 | -- | 3.7 | -0.495 | 1.72 | 18.72 | 27652 | -- | -- |
| 93.62 | 0.451 | 11.4 | -1.75 | 0.73 | -2.15 | -- | -- | -0.69 | 1.68 | 14.4 | 29016 | -- | -- |
| 117.7 | 0.505 | 11.2 | -1.39 | -- | -1.37 | -- | 3.79 | -0.494 | -- | 18.71 | 27705 | -- | -- |
| 147.14 | 0.569 | 11.6 | -3.85 | 0.684 | -- | 1.2 | -- | -1.58 | 2.05 | -- | -- | -- | -- |
| 152.5 | 0.578 | 11.6 | -3.88 | 0.683 | -- | -- | -- | -1.59 | 1.8 | -- | -- | -- | -- |
| 124.99 | 0.521 | 11.4 | -1.88 | -- | -2.03 | -- | -- | -0.694 | -- | 13.38 | 29026 | -- | -- |
| 111.28 | 0.491 | 11.3 | -- | 0.753 | -3.37 | -- | -- | -0.151 | 1.73 | 8.186 | 47520 | -- | -- |
| 180.79 | 0.628 | 11.6 | -3.85 | -- | -- | -- | -- | -1.57 | -- | -- | -- | -- | -- |
| 549.88 | 1.1 | 11.5 | -- | 0.612 | -- | -- | -- | -1.16 | 1.62 | -- | -- | -- | -- |
| 145.72 | 0.562 | 11.3 | -- | -- | -3.32 | -- | -- | -0.152 | -- | 7.28 | 47520 | -- | -- |
| 572.8 | 1.12 | 11.5 | -- | -- | -- | -- | -- | -1.15 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.03 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 2 | 67.16 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 5 | 68.07 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 16 |
| 6 | 68.15 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 21 | 68.37 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 18 |
| 51 | 68.79 | radiation | 10 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 52 | 68.80 | radiation | 10 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 79 | 69.05 | radiation | 20 | 43200 | > th | dose dependent | rect. | 15 | 17 |
| 99 | 69.56 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 9 |
| 113 | 69.63 | radiation | 1 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 118 | 69.81 | radiation | 30 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 199 | 70.06 | radiation | 1 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 210 | 70.20 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 212 | 70.21 | radiation | 30 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 215 | 70.22 | radiation | 40 | 43200 | < th | dose dependent | rect. | 16 | 16 |
| 224 | 70.43 | wind | 1 | 43200 | < th | dose dependent | sin | 14 | NA |
| 225 | 70.44 | radiation | 20 | 43200 | < th | dose independent | sin | 14 | NA |
| 232 | 70.52 | radiation | 1 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 264 | 70.81 | wind | 1 | 43200 | < th | dose dependent | rect. | 17 | 12 |
| 276 | 71.03 | radiation | 30 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 370 | 71.36 | radiation | 10 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 418 | 71.61 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 20 |
| 454 | 71.78 | radiation | 10 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 455 | 71.79 | radiation | 10 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 464 | 71.79 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 538 | 72.25 | radiation | 30 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 542 | 72.28 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 4 |
| 561 | 72.46 | radiation | 1 | 43200 | > th | dose dependent | sin | 13 | NA |
| 564 | 72.49 | radiation | 30 | 43200 | < th | dose independent | rect. | 24 | 7 |
| 565 | 72.49 | radiation | 30 | 43200 | < th | dose independent | rect. | 21 | 10 |
| 579 | 72.58 | radiation | 20 | 43200 | > th | dose dependent | sin | 13 | NA |
| 604 | 72.82 | radiation | 30 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 630 | 72.96 | radiation | 10 | 43200 | < th | dose dependent | sin | 11 | NA |
| 660 | 73.06 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 5 |
| 662 | 73.08 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 5 |
| 690 | 73.16 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 691 | 73.17 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 706 | 73.19 | radiation | 30 | 43200 | < th | dose dependent | sin | 12 | NA |
| 753 | 73.35 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 754 | 73.35 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 814 | 73.48 | humidity | 60 | 43200 | < th | dose independent | rect. | 18 | 16 |
| 815 | 73.48 | radiation | 1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 852 | 73.68 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 897 | 73.77 | humidity | 70 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 936 | 74.07 | humidity | 70 | 43200 | < th | dose dependent | rect. | 19 | 14 |
| 937 | 74.08 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 14 |
| 938 | 74.08 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 948 | 74.16 | radiation | 20 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 960 | 74.23 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 1 |