BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0664800 Os03g0664800|J100023K20
(203 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0664800 GCN5-related N-acetyltransferase domain contai... 356 8e-99
Os04g0259100 166 8e-42
Os03g0794200 GCN5-related N-acetyltransferase domain contai... 152 2e-37
Os03g0794300 GCN5-related N-acetyltransferase domain contai... 137 5e-33
Os03g0665000 GCN5-related N-acetyltransferase domain contai... 135 2e-32
Os03g0794400 GCN5-related N-acetyltransferase domain contai... 114 6e-26
>Os03g0664800 GCN5-related N-acetyltransferase domain containing protein
Length = 203
Score = 356 bits (913), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 187/203 (92%), Positives = 187/203 (92%)
Query: 1 MEAEAEAAEVTLREFTEADAEALFAWASDPRVVRFQRRDAYSHVDEARRYIVDKVLPHPW 60
MEAEAEAAEVTLREFTEADAEALFAWASDPRVVRFQRRDAYSHVDEARRYIVDKVLPHPW
Sbjct: 1 MEAEAEAAEVTLREFTEADAEALFAWASDPRVVRFQRRDAYSHVDEARRYIVDKVLPHPW 60
Query: 61 YRAICVAGADRPVGSISVKPADDLPLPEPESETGRLRSGCCRASVGYRVAHAHWGRGXXX 120
YRAICVAGADRPVGSISVKPADDLPLPEPESETGRLRSGCCRASVGYRVAHAHWGRG
Sbjct: 61 YRAICVAGADRPVGSISVKPADDLPLPEPESETGRLRSGCCRASVGYRVAHAHWGRGVAT 120
Query: 121 XXXXXXXXXXXXXWPWLERLEAVADVENPASQRVLEKAGFAREGVLRRYVVLKGRPRDMV 180
WPWLERLEAVADVENPASQRVLEKAGFAREGVLRRYVVLKGRPRDMV
Sbjct: 121 RAVRAVAEAVLAEWPWLERLEAVADVENPASQRVLEKAGFAREGVLRRYVVLKGRPRDMV 180
Query: 181 MFSRVRADLEEKPAQAHGPSDGV 203
MFSRVRADLEEKPAQAHGPSDGV
Sbjct: 181 MFSRVRADLEEKPAQAHGPSDGV 203
>Os04g0259100
Length = 333
Score = 166 bits (421), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 85/117 (72%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
Query: 44 VDEARRYIVDKVLPHPWYRAICVAGADRPVGSISVKPADDLPLPEPESETGRLRSGCCRA 103
VDEARRYIVDKVLPHPWYRAICVAGADRPVGSISV PADDL P+ ESETG LRS CCRA
Sbjct: 197 VDEARRYIVDKVLPHPWYRAICVAGADRPVGSISVNPADDLREPD-ESETGGLRSRCCRA 255
Query: 104 SVGYRVAHAHWGRGXXXXXXXXXXXXXXXXWPWLERLEAVADVENPASQRVLEKAGF 160
SVGYRVAH HWGRG WPWLERL AVADVENPA +R K F
Sbjct: 256 SVGYRVAHVHWGRGVVTRAVRATAEVVSAEWPWLERLAAVADVENPAGRRAAAKRYF 312
>Os03g0794200 GCN5-related N-acetyltransferase domain containing protein
Length = 193
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 105/190 (55%), Gaps = 24/190 (12%)
Query: 7 AAEVTLREFTEADAEALFAWASDPRVVRFQRRDAYSHVDEARRYIVDKVLPHPWYRAICV 66
A EV+LR F AD +A+ WASDP+V R + Y + Y+ D VLPHPW+RAICV
Sbjct: 16 AVEVSLRRFDLADVDAMMVWASDPQVAAVCRWEPYESTEPLLAYLRDTVLPHPWFRAICV 75
Query: 67 A--------GADRPVGSISVKPADDLPLPEPESETGRLRSGCCRASVGYRVAHAHWGRGX 118
A G DRPVG++SV P D CRA +GY VA AHWG+G
Sbjct: 76 AAAFDGDGGGEDRPVGAVSVSPTAD----------------ACRAELGYVVARAHWGKGV 119
Query: 119 XXXXXXXXXXXXXXXWPWLERLEAVADVENPASQRVLEKAGFAREGVLRRYVVLKGRPRD 178
LER+EA+ DV N ASQRVLEKAGF RE VLR Y VLKG RD
Sbjct: 120 ATAAVKRVVAAVFGEVEGLERVEALVDVRNAASQRVLEKAGFRREAVLRSYCVLKGEVRD 179
Query: 179 MVMFSRVRAD 188
MV++S + D
Sbjct: 180 MVIYSFISTD 189
>Os03g0794300 GCN5-related N-acetyltransferase domain containing protein
Length = 177
Score = 137 bits (345), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 104/188 (55%), Gaps = 24/188 (12%)
Query: 9 EVTLREFTEADAEALFAWASDPRVVRFQRRDAYSHVDEARRYIVDKVLPHPWYRAICVAG 68
EVTLR F +D +A+ AWASDP V F R + Y + Y+ D VLPHPW+RAIC+A
Sbjct: 2 EVTLRRFELSDVDAMMAWASDPAVAAFCRWEPYQSTEPLLAYLRDTVLPHPWFRAICLAT 61
Query: 69 -------ADRPVGSISVKPADDLPLPEPESETGRLRSGCCRASVGYRVAHAHWGRGXXXX 121
RPVG++S+ P D CR +GY VA AHWG+G
Sbjct: 62 GAGAGDGDGRPVGAVSLAPTAD----------------ACRGELGYVVARAHWGKGVATA 105
Query: 122 XXXXXXXXXX-XXWPWLERLEAVADVENPASQRVLEKAGFAREGVLRRYVVLKGRPRDMV 180
L R+EA+ DV+N ASQRV+EKAGF REGVLRR+ KGR RD+V
Sbjct: 106 AVRRAVAAVLGGEVSGLARVEALVDVDNRASQRVVEKAGFRREGVLRRHYWHKGRVRDLV 165
Query: 181 MFSRVRAD 188
M+S V +D
Sbjct: 166 MYSFVSSD 173
>Os03g0665000 GCN5-related N-acetyltransferase domain containing protein
Length = 214
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 113/202 (55%), Gaps = 24/202 (11%)
Query: 7 AAEVTLREFTEADAEALFAWASDPRVVRFQRRDAYSHVDEARRYIVDKVLPHPWYRAICV 66
A VTLR ADA+ AWASD RV+RF RR + ++A I D VL HPW+RAICV
Sbjct: 18 AVAVTLRPLGLADADDFMAWASDERVMRFLRRPLCAAREQAVAQIRDTVLGHPWFRAICV 77
Query: 67 ----AGAD-RPVGSISVKPADDLPLPEPESETGRLRSGCCRASVGYRVAHAHWGRGXXXX 121
AGA RPVG +SV P D G RA++GY ++H WGRG
Sbjct: 78 DDDDAGAGRRPVGQVSVWPYAD--------------EGGHRANLGYALSHGLWGRGIATA 123
Query: 122 XXXXXXXXXXXXWPWLERLEAVADVENPASQRVLEKAGFAREGVLRRYVVLK-GRPRDMV 180
P LERLEAV DVEN SQR LEKAGF +EGVLRRY+V + G D V
Sbjct: 124 AITMVVARVFDELPGLERLEAVTDVENVRSQRALEKAGFRKEGVLRRYIVRRSGEVMDAV 183
Query: 181 MFSRVRADLEEKPAQAHGPSDG 202
++S + +D +P+ AHG + G
Sbjct: 184 IYSFLASD---RPS-AHGATRG 201
>Os03g0794400 GCN5-related N-acetyltransferase domain containing protein
Length = 169
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 101/179 (56%), Gaps = 17/179 (9%)
Query: 10 VTLREFTEADAEALFAWASDPRVVRFQRRDAYSHVDEARRYIVDKVLPHPWYRAICVAGA 69
VTLR F ADA+A+ AWASDP V F + Y VD R +I D VLPHPW+RAIC+AG
Sbjct: 4 VTLRRFELADADAMMAWASDPEVTAFMTWEPYESVDSLRAFIRDTVLPHPWFRAICLAG- 62
Query: 70 DRPVGSISVKPADDLPLPEPESETGRLRSGCCRASVGYRVAHAHWGRGXXXXXXXXXXXX 129
D G++SV P D CRA V VA AHWG+G
Sbjct: 63 DGDGGAVSVTPTADR----------------CRAEVAVAVARAHWGKGVATAALRRALAA 106
Query: 130 XXXXWPWLERLEAVADVENPASQRVLEKAGFAREGVLRRYVVLKGRPRDMVMFSRVRAD 188
+ER+EA+ DV N AS+R LEKAGF +E VLR Y V+KG+ RDMV++S + D
Sbjct: 107 AFADLDGVERVEALVDVGNAASRRALEKAGFQQEAVLRSYCVVKGQLRDMVIYSFISTD 165
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,912,375
Number of extensions: 291997
Number of successful extensions: 894
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 881
Number of HSP's successfully gapped: 6
Length of query: 203
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 107
Effective length of database: 12,023,257
Effective search space: 1286488499
Effective search space used: 1286488499
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 153 (63.5 bits)